Neodiprion virginianus: 124307688
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Entry
124307688 CDS
T09046
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
nvg
Neodiprion virginianus
Pathway
nvg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124307688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvg03019
]
124307688
Messenger RNA biogenesis [BR:
nvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124307688
mRNA degradation factors
5'-3' decay
Lsm complex
124307688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
124307688
NCBI-ProteinID:
XP_046625583
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All DBs
Position
6:25263963..25265205
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AA seq
134 aa
AA seq
DB search
MNVVPGTASLLEELDKKLMVLLRDGRTLIGYLRSVDQFANLVLHRTIERIHVGKEYGDIP
RGVFIVRGENVVLLGEIDGDKEKDLPLSQVPVDDILDAQRREQELKQDQEQLMSKALKER
GLSYIPDLGHDDMF
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtagtgcccggaacagcgtccctcctcgaagaactagacaaaaagctaatggtt
ctgttaagagatggtagaacacttatcggatatctcagaagtgttgatcaatttgccaac
ctggtccttcatcgaactatcgaaagaattcacgtcggcaaagaatatggagatattcct
cggggcgttttcatcgtccgaggcgagaatgttgttctcttgggtgaaatagatggggac
aaggaaaaggatctgccactatctcaggtgcccgtagatgatatattagatgctcaaaga
cgagagcaagaattgaagcaagatcaagaacaactgatgagcaaagctctgaaagaacga
ggcctctcctacattccggatttggggcatgatgacatgttctga
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