Neodiprion virginianus: 124307754
Help
Entry
124307754 CDS
T09046
Name
(RefSeq) spectrin beta chain isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
nvg
Neodiprion virginianus
Pathway
nvg04517
IgSF CAM signaling
nvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124307754
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124307754
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nvg04812
]
124307754
Cytoskeleton proteins [BR:
nvg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
124307754
Intermediate filaments
Intermediate filament-binding proteins
124307754
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CCDC162_middle
Motif
Other DBs
NCBI-GeneID:
124307754
NCBI-ProteinID:
XP_046625741
LinkDB
All DBs
Position
6:complement(26061096..26088737)
Genome browser
AA seq
2828 aa
AA seq
DB search
MTTDISVVRGGWDPTLQQEIVDEYEYDGGNSSSRLFERSRIKALAGERESVQKKTFQKWV
NSHLVRCSCRIGDLYVDLRDGKMLIKLLEILSGERLPRPTKGKMRIHCLENVDKALQFLR
EQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDNQETKSAKDALLLWCQ
MKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIHFDKLSKLNAIYNLNNAFNVAEDK
LGLTKLLDAEDIFVDHPDEKSIITYVVTYYHYFSKMKQETVQGKRIGKVVGIAMENDRMI
HDYESLTSDLLRWIEGTIEALGDRRFANSLVGVQTQLSQFSNYRTVEKPPKFVEKGNLEV
LLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREELIRQEKLEQLA
ARFNRKASMRETWLSENQRLVSQDNFGFDLAAVEAAAKKHEAIETDIFAYEERVQAVMAV
SQELEAENYHDIDRINARKDNVLRLWNYLLELLKARRVRLECSLQLQQNFQEMLYILDSM
EEIKMRLLTDDYGKHLMGVEDLLQKHSLVEADINVLGERVKAVVQQSQRFLEQGEDYRPC
DPTIIIERVQQLEDAYAELVRLAVERRARLEESRNLWQFYWDMADEENWIKEKEQIVSTG
DIGHDLTTINLLLSKHKALENEIQSHEPQLMSVAAVGDELISQHHFGSDRIKERLQEILG
MWNHLLDLAAFRRKRLEEAVDYHQLFADADDIDIWMLDTLRLVSSEDVGRDEANVQSLLK
KHKDVTDELKNYATTIEQLHQQASQLGEHDSKSPKVLERLASIDSRYKELLELAKLRKQR
LLDALSLYKLFSESDGVEQWIGEKNRMLETMVPAKDIEDVEIMKHRYDGFEKEMNANASR
VAVVNQLARQLLHVEHPNSEQIVARQNELNQKWAELREKAEGKREALNSAHGVQTFHIEC
RETVSWIEDKKRILQQTDSLEMDLTGVMTLQRRLSGMERDLAAIQAKLNALEKEAQSIEQ
EHPDEAAVIRERITQIHTMWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQTWLTKTQTD
VASEDTPTSLADAEKLLTQHQNIKEEIDNYTDDYQKMMDYGERLTSEAGDGDTQYMFLRE
RLNALKMGWEELHQMWANRQNLLSNSLNLQVFDRDARQAEVLLSQQEHILTKDETPTNFE
QAENMIKRHEAFMTTLEANDDKINSVVQFAGRLVEEGHFAADKVKKKADAINDRRNANHE
RANQVMDKLKDQLQLQMFLQDREELVEWVQEKHITAQDETYRSAKTVHSKWTRHQAFEAE
IASNKDRLQQLQQAADELIQLKPELAEIIKPKVEELCDQFEELETTTKDKGERLFDANRE
VLIHQTCDDIDSWMNELEKQIESTDTGSDLASVNILMQKQQMIETQMAVKARQVTELDKQ
AEHLQRTVPDEKMEEIKCKKEKVAQRFEQLKAPLTDRQRQLEKKKEAYQFRRDVEDEKLW
IAEKMPQATSSEYGNSLFNVHMLKKKNQSLRTEIENHEPRINSVCKNGQKLIDEGHEDSA
EFTQRISDLSDKWRELKDAVDNRNKHLLQNEKAQQYFFDATEAESWMSEQELYMMVEDRG
KDEISAQNLMKKHESLEHAVEDYADTIRQLGETARQLINDQHALSDQIAVKQSQVDKLYA
GLKDLAGERRAKLDEALQLFMLNREVDDLEQWIAERELVAGSHELGQDYDHVTLLWERFK
EFARDTETIGSERVAAVNGIADSLIATGHSDAATIAEWKDGLNEVWQDLLELIETRTQML
AASRELHKFFHDCKDVLGRILEKQNAMSDELGRDAGSVSALQRKHGNFIQDLFTLQSQVT
QIQDESSKLQASYAGDKAREITNREAEVVAAWNNLQSLCEGRKAKLEDTGDLFRFFNMVR
TLLIWMDDVVRQMNTSEKPRDVSGVELLMNNHQSLKAEIDTREDNLTACLDLGKDLLARN
HYASVQIKEKLLALTDHRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLIAQEPYLM
SQELGHTIDDVENLIKKHEAFEKSAAAQEERFSALQRLTTSECPDKECGLYPPVLEFSHK
LIFTPECPPSSKIPITQPKKYLKSQGEIVRDIILYCDRFIMPDTMQRRECTSTGTKIIYP
NAINYRTDKTKPSKSFLWSSSWNSTSKTSQGSSGSQPVSPYAEFTDVPVFDDEIVTSNER
KTLRRISTISAHKPEFFRLHSTPEIADLTVLIPRKYCVSNSSSDTEYSEIIDTACVPEKR
TKSSTSIDVSHSVMIHNLVDTDNEFNHKHVNVELKTQLVKPTDTQMNEYGLEAYLRDKKS
EKALAEISLNDELSSEDRHSLDLEKSITNIRKLRLEIGAFTDDLIKADLDPSELLILAER
CFCNEDNSIRSFNHLMQVKFNDHDYMSLKSRAMPPKSSKLLTNETSSVRERSKSLLGPKD
KFKKSSNLNKVDPNLSAISDSEKSFPSQDHSFSLDNVTLENNVTQFELRELKRQEQEREE
EERREQEEAAAAEAAKLAKATPVTSPDEPPSDRVDGDGNQSGEQAGEEDGHVALRKPSTR
SPQTQEKPKEVHVQKPARLSTPDVSTPPISPTSPKSQSSYPTTPTTPKGGSGSESGTLRR
KERSRSKSPFRSFRWKKSTKSPSLDRSGVSDDDHSYTEQRSPGDDEFEGTLTRKHEWEST
TKKATNRSWDKLYMVVRGQNLVAYKDQKSYKAAADQPYKGEPPLDLRGASVQVASEYTKK
KHVFRVKSQSGADFLFQAKDDAEMLEWVSLLNQAAQGVSGASTSRAHTLPAPTQAETKRR
SFFTLKKN
NT seq
8487 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgacatctcggtggtgcgcgggggttgggacccgacgcttcaacaggagatt
gtcgacgagtacgaatacgatggaggaaattccagttcgagactttttgaacgatcccgt
atcaaggctttagctggtgaacgtgaatcggtacagaagaaaacatttcaaaaatgggtg
aattcccatctggtacgatgttcttgtcgtatcggagatctctatgtcgatcttcgcgat
ggaaaaatgcttataaagctgctggaaatattgtcgggcgaacgtttgccacgtcctaca
aaaggaaaaatgcgtatccattgtttggagaatgtagataaggcactgcaatttttgcga
gagcaaagagtccatcttgaaaacatgggatcacacgacatcgtcgatggaaatccaaga
ttaagcttgggattaatttggacaatcattctacgtttccaaattcaagacatcaccata
gaagaaactgataaccaggaaactaaatcagccaaggatgctttgcttttgtggtgtcaa
atgaagactgctggatatcacaatgtaaatgttaggaacttcacaacatcttggcgagac
ggtcttgcgttcaatgccataatacacaaacatcgtccagatttgatccactttgacaag
ctatcgaaattaaacgcgatctacaatttaaacaatgctttcaatgtcgcagaggataaa
ttaggtctaacaaaattgttagacgcagaggatatttttgttgatcatcctgacgaaaag
tctataataacttatgttgtgacctactatcactacttctcgaaaatgaagcaggagacc
gttcaaggtaaacgaattggtaaagttgtcggaattgccatggagaacgatagaatgatt
cacgattatgaaagtttgacaagtgatttacttagatggatcgaaggaacaattgaagct
ttgggtgatcgtcgttttgctaattctcttgtgggcgttcagactcaactttcacagttt
tccaactaccgtacagtagaaaaaccacctaaatttgtagaaaagggtaacttggaggtg
ctactgtttacactgcaatccaaaatgcgtgccaacaatcagaaaccctacacacccaag
gaaggtaaaatgatttccgatatcaacaaagcctgggagagattagaaaaagctgaacac
gagcgtgaattggcgctcagagaagaattgatacgtcaagaaaaattggagcaattggct
gcaagatttaaccgaaaagccagcatgagagaaacttggctatctgaaaatcaacgactt
gtatcgcaagacaactttggcttcgatttagcagccgtagaagctgcagctaagaaacac
gaggctatagaaactgatatattcgcttacgaagaacgtgtgcaggcagtcatggctgtg
tctcaagagttagaggctgaaaactaccacgatatagaccggatcaatgcccgaaaggac
aatgttttaagattgtggaactaccttctggaattactgaaagcacgaagagtgcggttg
gaatgttcacttcaattacaacagaacttccaagaaatgttgtacattttagacagtatg
gaagaaattaagatgcgattgttaactgatgattatggtaaacatttgatgggcgttgaa
gatcttcttcaaaagcattcacttgttgaggccgacatcaatgtcttaggtgagagagtt
aaggctgtcgtacaacaaagccaaagattcttagaacaaggagaagattatcgtccttgc
gatccaaccattattattgaacgagtgcaacaacttgaagatgcttacgctgaattggtc
cgcctggctgttgagcgtcgagcacggcttgaagaatctcgtaatctttggcaattctat
tgggatatggctgacgaagagaattggatcaaggagaaagagcagattgtttctacgggt
gatatcggtcatgacttaactaccattaatttacttttgtccaaacacaaggccttggag
aacgaaatccaatctcacgaaccacaattgatgtcagttgctgcagtgggtgatgaattg
attagtcaacaccatttcggttctgatcgcattaaggaaagattacaagaaatattaggc
atgtggaatcacctgttagacttggcggcgttcagacgcaagcggttagaagaagctgtt
gattatcatcaattatttgctgatgccgacgatatcgatatttggatgctcgatactctg
cgattggtatcgtctgaggatgtcggtcgcgatgaagcaaatgtgcaatctttgctgaaa
aaacataaagatgtcactgatgaactgaaaaattacgctacaaccattgaacagctgcat
caacaagcatcgcaacttggagaacacgattctaagtctccaaaggtattagaaagactc
gcctcaattgattcgagatacaaagagcttctggaactggctaaattgcgcaagcaaaga
ttattagatgccttgtctctgtacaagctgttcagcgaatcggatggagttgaacaatgg
atcggagaaaagaacagaatgttggaaactatggttcctgccaaggacattgaagatgtt
gagataatgaaacaccgctacgatggctttgagaaggaaatgaatgccaatgcttctcgc
gttgctgtagttaatcaattggctagacagctactacatgttgaacatccgaactcagag
cagattgttgcacgtcagaatgaattgaatcaaaagtgggccgagctaagagagaaggct
gaaggcaaacgtgaagcactcaactctgcacatggagtacaaaccttccatatcgaatgt
cgtgagaccgtatcttggatcgaagataagaaacgcatcttacagcaaaccgatagctta
gaaatggacttgactggtgtgatgacgctacaacgtcggcttagcggtatggagcgtgac
ttggcagccatacaggcgaaattgaatgcacttgaaaaagaagcgcaatcaattgagcag
gaacatcctgatgaggctgcagtcattcgtgaacgaatcacccaaattcataccatgtgg
gagcaattaactcagatgcttaaagaacgcgatgccaaactcgaagaagctggagattta
catagattcttgcgtgaccttgatcatttccagacttggcttaccaagacccaaacagat
gttgccagcgaagatacacccacaagccttgcagatgctgagaaactgttgacccagcat
cagaatattaaggaagagattgacaactacacggacgattatcagaagatgatggactat
ggcgagaggctaacaagtgaggctggagatggagatacacagtacatgttcttgagagaa
agattgaatgccctgaaaatgggctgggaagagctccaccaaatgtgggcaaatcgtcaa
aatctgttatcgaattcgttgaacttgcaggtctttgaccgcgatgctcgccaagctgaa
gttttgttgtctcagcaagaacatatccttaccaaagatgagactccgacgaactttgaa
caagcagaaaatatgataaaacgccacgaagcatttatgactacattggaagccaatgac
gataagatcaactcggtcgttcaatttgcgggcaggttagttgaggaaggccactttgcg
gcggacaaagtcaagaagaaggcagatgcaataaatgatcgaagaaacgccaatcacgaa
agagctaatcaagtgatggacaaattgaaggatcaacttcagttgcagatgttcttacag
gatagagaggaactcgttgaatgggtacaggaaaaacacatcactgctcaagatgaaact
tatcgcagtgcaaaaacggttcatagcaaatggacgaggcaccaagcgtttgaagcagaa
attgctagcaataaagatcgtctgcaacaactgcaacaggctgctgatgagttgattcaa
ttgaagcctgaattggctgagatcataaagccgaaagttgaagaattatgtgaccaattt
gaagagctggaaacaacaacaaaagacaaaggagagagactattcgatgctaatcgtgaa
gtcctcatacatcagacttgcgatgatatcgactcgtggatgaatgaattggagaaacag
attgaaagtacagatactggatctgatcttgcctctgtcaatattttgatgcagaaacag
cagatgatagaaactcaaatggctgtgaaggctcgccaagttacagagctcgataaacag
gctgaacatttgcagagaacagtaccagacgagaagatggaagaaataaaatgcaagaag
gagaaagttgcgcaaagatttgaacagcttaaggcaccacttaccgatcgacagcgtcag
ctggagaagaaaaaagaagcgtaccaattcaggcgtgacgttgaggatgagaaattatgg
attgcagaaaaaatgccacaagctaccagttcggaatatggtaattccctcttcaatgtt
catatgttgaagaaaaagaatcaatctctccgtactgaaatcgaaaaccacgaaccaaga
attaattctgtatgtaaaaacggtcagaaattgattgacgagggacacgaagatagtgct
gaattcactcaacgtatctccgatctttcggataaatggcgcgaactgaaagatgcggtt
gacaacaggaataagcatttgttacaaaacgaaaaggcacaacaatacttcttcgacgcc
acggaggctgaatcgtggatgagcgaacaggaattatacatgatggttgaagatcgtggt
aaagacgagatatctgcgcaaaacctaatgaaaaaacacgagtctttggaacatgctgtc
gaagattatgccgataccatccgtcagctaggtgaaacagcaagacaattgataaacgat
cagcatgcattgagtgatcaaattgcagtcaaacaatcccaagttgacaagctatatgca
ggactaaaagatttggctggcgaacgccgtgccaagctagacgaagcccttcaattgttt
atgctaaaccgagaagttgatgatttggagcaatggatagctgagcgagaattagttgca
ggcagtcatgagttaggtcaagattacgatcatgttactttgctctgggaaagattcaag
gaatttgctcgtgacacagagacaataggatcggaaagagtcgcagctgtaaatggaatt
gcagattctttgattgcaacaggacattcggatgcagctacaattgcagaatggaaggat
ggcctgaacgaagtctggcaagatttgctagagcttattgaaacacgaactcaaatgtta
gcagctagccgtgagctacataaatttttccatgactgcaaagatgttcttggaaggatc
ttggaaaaacaaaatgcaatgtctgatgaattgggccgcgacgctggctcagtttcggca
cttcaacgtaaacacggcaactttatccaagacttattcaccttacagtcacaggtgaca
caaattcaagatgaatcgtctaaacttcaagctagctacgcaggggataaggctagagaa
atcacgaatagagaggccgaagtagtagcagcttggaataatttacaatctttgtgcgaa
ggacgtaaggcaaaattggaagacaccggcgatttgttcagattcttcaacatggttaga
acattactgatttggatggatgatgttgttaggcaaatgaacacttcagagaagccccgt
gatgtatcaggtgtagaactacttatgaataatcatcaaagtttgaaagctgaaatcgac
accagggaagacaatcttactgcttgtcttgacctaggaaaagatctattggcaaggaat
cattacgctagcgtccaaattaaggaaaaactactagcattgactgatcacagaaatgca
ttgttgcaccgctgggaagaaagatgggagaatctgcagctaattcttgaagtttaccaa
tttgccagagatgcagctgtagcagaagcttggcttattgctcaggagccatatctcatg
agccaagaacttgggcatacaatcgacgacgtagaaaatctgatcaagaaacatgaagct
ttcgaaaaatcagctgcagcacaagaagaaagatttagtgctctacaacgactcacaacg
tctgagtgtcctgataaagaatgcggcctgtacccaccggtgctggaatttagtcacaaa
ttaatctttactccggaatgtcctccgtcatctaaaatccctataacacaacccaaaaaa
tacctcaaatcccaaggtgagattgtgcgtgacattattttgtactgtgacagatttatc
atgcctgatacgatgcaaagacgtgagtgtacatctacaggaactaaaatcatttatcca
aatgctataaattatagaactgataagacaaaaccctccaagtcttttctatggagttct
agttggaattctacgagtaaaacttctcaaggttcttctggcagtcaacctgtatcacct
tatgcagaattcacagatgtgcctgtattcgatgatgagattgttacttccaacgaaaga
aaaaccttaagaagaatcagcacaatcagtgctcacaaaccagaatttttcaggttacat
tccactcctgaaattgcggatttgactgtattgattccgaggaagtattgtgtgtcaaac
tcttcctcggataccgaatacagtgaaataattgacacagcttgtgttcctgaaaagaga
acgaagagttcgaccagtattgatgtcagtcattctgtaatgatccacaacctcgtggat
actgacaatgagttcaatcacaaacatgtaaatgtcgaactaaaaactcaactagtcaaa
cccacagatacacaaatgaatgaatatggtctggaagcatatcttagagacaaaaagtca
gaaaaagcattggctgagatttctttaaacgacgagttatcaagtgaggataggcatagc
ctagaccttgaaaaatcaataactaacataaggaagttacgtcttgaaattggggcattt
acggatgatttaataaaagcagaccttgatccaagtgagttgcttattttagcagagcgt
tgtttctgtaatgaagataacagtattcgtagttttaatcatttaatgcaggtaaaattc
aatgatcacgattatatgtcattgaaatcacgcgcaatgccaccaaaatcctctaaatta
ctaacgaacgagacatcgagtgtccgtgaacgtagtaagtcccttttgggtcctaaagac
aagttcaaaaaaagttctaatttgaacaaagttgacccaaacttatccgctatctcggat
tcagaaaaatcattcccttcccaagaccactccttttctttagacaatgtaaccctggaa
aacaatgttactcaatttgagttgagagaacttaaacgacaagaacaagaaagagaagaa
gaagaaaggcgtgaacaggaagaagctgccgcggcagaggctgcgaagttagctaaagcg
acacctgtcaccagtcctgacgagccacccagtgacagagttgatggcgatggtaatcaa
agcggggaacaagctggtgaagaggatggtcatgtggcactacgcaagccttcaactaga
tcgccacaaacccaagaaaaacccaaggaagtgcatgttcagaagcctgcacgactatcg
acaccagacgtttcaacaccgccgatttctccaacatctccaaagtcccagtcgtcatat
ccaacaacaccgacaactccgaagggtggcagtggttctgaatccggtactttgcggcgc
aaggaacgaagccgtagtaaatcaccatttagaagtttccgttggaaaaaatcaacaaag
tcacctagcctggatcgaagtggtgtgagcgatgatgatcatagttatactgaacaacgg
agtcctggcgatgacgaatttgaaggaacgttaacgcgtaaacacgaatgggaaagcaca
acaaaaaaagccacgaatcgatcatgggacaaactatatatggtcgtacgtgggcaaaat
ttggtagcttacaaagatcaaaaatcctacaaagctgctgccgaccagccatacaaaggt
gaaccacctctagatcttagaggtgcctctgtacaggtcgccagtgaatacaccaagaag
aaacatgtcttccgagtcaagtctcagagcggagcagacttcctattccaagctaaggat
gacgcagaaatgcttgagtgggtatctctgttaaatcaagctgcacagggtgtatctggc
gcgagtacatctagagcacatactctgccagcaccgacgcaagctgaaaccaagcggcgt
agtttcttcacactcaagaaaaactaa
DBGET
integrated database retrieval system
