Neodiprion virginianus: 124308045
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Entry
124308045 CDS
T09046
Name
(RefSeq) DNA repair protein complementing XP-C cells homolog isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
nvg
Neodiprion virginianus
Pathway
nvg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
124308045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nvg03400
]
124308045
DNA repair and recombination proteins [BR:
nvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
124308045
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
124308045
NCBI-ProteinID:
XP_046626316
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Position
6:3358960..3365900
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AA seq
918 aa
AA seq
DB search
MNADGSDSESSDSSNEFMVAPDKLKSISPFFTKPTRKTASAPKKLESSEESDFDYENESH
GNNDDLMAQVLKNLEATKKSQAIQSDQSSAEKPENTKPVKKELTNEIADLLLLGETGATA
STAEQDQDEPDEEGPAEDSAPSNYSIPKEGVKITLVDSKLIFNQRKKKKQETLEDLLKKK
LNQQLRSNQVLIHKVGLLCWMAHGFYVNKQINNPILLAAALKLAPKNCYPKGRVDLSYLE
KITKWFQGVFTFPTGKPESGITTLNLLRRLKDKEIHNYQELVLLYVATLRALGLTCRLVI
SLQPPALKVTKEQLIAPESSKVKDAKVKKEPKKETATRSPKISQEMKIPGQETEKGNISA
RLRKATEARRRAAEILKRKKSTNSDSAEDVKPPAKKLRSRTVAAAIPVDKKGKRNSDKVK
NDKEVTEKGGRSLRSRAKTADKHWPKDEDTDDDDDDDDEYKMDDDKEENEDGEEDTDDEP
FEKTHRSKHKASASKQRSRSQNKNTASKIKKQSNTGSRRSSTARKLISSDEDDEENNEKP
KKVKNTRDMWAEVYVECEENWISVSVPDAKIHCIAELYKNATDPVLYVMALNSEGRIKDV
TRRYCPHWLTVTRKQRIDEKWWLEAHTPWKEPETALTKAEDEMLKQKELEQPLPKTVSEC
KGHPLYVLPRHLLKFEAFYPPDVVPLGYVRGEPIYSRHCVHTLRSRETWIKSARVVKPGE
NCYKVVKARPKYDKLSGARLKDESLEVFGKWQTDPYVPPEAKDGIVPRNEYGNVDLFKQC
MLPKGTVHIQLPALNRIARKLDIDCAPAVVGFNFGGHGALPAFDGFIVCEEFEDVLREAW
EVEQAEADKRAREKYEKRVYGNWRKLIKAVFIRERLTAKYDFNADEEKEKSSTSNKQTNK
RVKQTKVGGKKTKVDKKK
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgatgggtctgacagcgagagctcggacagtagtaacgagtttatggtagcc
ccggataagctgaagtcaatatcgccgtttttcacaaaacctactcgaaaaacagcgagc
gcaccaaagaagctcgaaagttcggaggagtcggattttgattacgaaaatgaatcccac
ggtaacaatgatgacctcatggctcaggtcctcaagaaccttgaggcgacgaagaaaagt
caagcgattcaatctgatcagagcagcgcggaaaaacctgaaaataccaaaccagtgaaa
aaagaactcaccaacgaaatagctgatcttctactcttgggagaaactggagcgacagct
tcaactgcggagcaagatcaggacgagccggacgaagaaggaccagctgaagactccgct
ccgtctaactacagtattccaaaagaaggggtaaagataaccctggtcgattcgaaactg
attttcaatcagaggaagaagaagaaacaggaaacgcttgaagatttgttgaaaaagaaa
ttgaatcaacagcttaggtccaatcaagtattgatacacaaagtaggactcctctgttgg
atggcgcacggtttttacgtaaacaagcaaattaacaatccgatattacttgcagctgca
ctaaaattggcaccaaaaaactgctacccaaaaggcagggttgatctgtcttatcttgaa
aaaatcaccaaatggtttcaaggtgtgtttacgtttcctacgggcaagccagagtccggc
attacgacgctgaatttattgaggagactcaaagacaaagagatccacaattatcaagaa
ctcgtattactctacgtagcaacgctaagagccttggggctgacctgtcgcttggttata
tccctgcaacccccggctcttaaagtaacaaaagagcagctcatcgccccagagtcttcc
aaagtgaaagatgcaaaggtaaaaaaggaaccgaaaaaagaaacggccaccagaagccca
aaaatatcacaagaaatgaaaattcctggacaagaaacggaaaaaggaaatatatcagcc
aggcttcgcaaagccactgaggccaggagaagggcagctgaaattctaaaaagaaaaaaa
agtacgaattcagattctgcggaggatgttaaaccaccagctaaaaaattgagatcaaga
acggtggctgccgcgatacccgttgacaagaagggcaaaaggaactctgataaagtgaaa
aacgacaaagaggtgactgaaaaaggtggaagaagtttaaggtcgcgggcaaaaacagct
gacaagcattggccaaaagatgaggatacggatgacgacgatgatgatgatgatgaatac
aaaatggatgatgataaggaggagaatgaggatggcgaggaagatacggatgatgaacca
tttgaaaaaactcacaggtcaaagcacaaagcatcagcttccaagcagcgttctcgcagt
cagaataaaaacactgcatctaaaattaaaaaacagtcaaatacaggttcaaggaggagc
tcaaccgccaggaaactgatatcgtctgatgaagatgatgaagagaacaatgagaagcca
aagaaagtgaaaaacacaagggatatgtgggcagaagtttatgttgaatgcgaggaaaat
tggataagtgtcagcgtaccagatgcaaaaattcattgcattgccgagctatacaaaaat
gctacggatccagtgctgtacgtcatggccttgaattctgagggtcgaatcaaggatgta
acacgccgatattgtccccactggctgaccgtgacccgcaaacaacggatcgatgaaaag
tggtggctggaagctcacactccttggaaagaacctgaaacagccttaacaaaagcagag
gatgagatgctcaagcaaaaggaactggaacaacccctaccaaagacagtttcggagtgc
aaaggtcatcctctgtacgttctgcccagacatcttctcaaatttgaagccttttacccg
ccggatgtcgttccacttggctacgttcgtggcgagcctatatactctcgtcattgtgtt
cacacattgcgctcccgcgaaacgtggatcaaaagcgctagggtagtgaaaccaggagag
aattgctacaaagttgttaaagcaagaccaaaatatgataagctttcaggtgccaggctg
aaggatgagtctctggaagtatttggaaaatggcagacagatccgtacgttccaccagaa
gccaaggatgggattgtgcctcggaatgaatatggaaatgtggatttattcaaacagtgt
atgttgcctaaaggaactgttcacattcagcttccagcactgaaccgcattgcaagaaag
ttggacattgattgtgctccagctgtggtgggcttcaatttcggaggacatggggcgctg
cctgcttttgatggatttattgtctgtgaggagtttgaagatgttttacgggaggcttgg
gaagtggaacaagcagaggcagataagcgtgccagagagaaatacgagaagagggtttac
ggaaattggaggaagttgattaaagctgttttcatcagagaacgactaacagctaaatat
gattttaatgctgacgaagaaaaagaaaaatccagcacatccaataagcaaacgaacaaa
cgggtaaaacaaaccaaagttggtgggaaaaaaacaaaggttgacaaaaaaaaatag
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