Neodiprion virginianus: 124308058
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Entry
124308058 CDS
T09046
Name
(RefSeq) low-density lipoprotein receptor-related protein 4 isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvg04131
]
124308058
Membrane trafficking [BR:
nvg04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
124308058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
SGL
cEGF
DUF5050
Vgb_lyase
EGF_LRP2
EGF_CA
Arylesterase
Sigma_reg_N
EGF
ASFV_J13L
EGF_3
hEGF
DAG1
DUF3377
SKG6
Orf78
SHP
Motif
Other DBs
NCBI-GeneID:
124308058
NCBI-ProteinID:
XP_046626338
LinkDB
All DBs
Position
6:3433626..3452516
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AA seq
2080 aa
AA seq
DB search
MSARNIRGGQAGSTVQAFLLICSIFGGSGMGPVLSSEVTTDTPANKGAARQMFGSGSLRQ
TGSGPIVLGTTESPFYDGHLYEGPGGFGYNVPGGRNHVSQKSHPQLPGGYHGPPRMPVSQ
PDADTYEASSDVKVRNGAPVNGLYGQSRQGVGRGMDADRGRGGFGDIYGGMGGRGMDETY
VNPDRTRVHNGLQRGHGIGANPNIEGHFGVGGRTLIHELEDESDLTGEYLLPCGWQCKRS
EFLCLQSCTCIPLRSRCDGEIDCEDFQDELDCDNGSGYGGNAECVGETKIRCPLSGKCIS
KDWLCDGDDDCGDFSDESHCGTSQNCTEDQFECKNGLCVQRAWLCDGENDCKDFSDEVNC
TKKVECTQYEFKCQDGSCITLNWHCDQEPDCSDGSDEVNCEKTGVSCGSNEFQCAYPKCV
RHEYRCDGDDDCGDGSDEKDCPGSLTTSCNDNEFRCSGGKCISNKCVCDGNKDCDGGEDE
EMCNHPTPQGCSPHNEFTCSTGTCVPRLWVCDGVPDCPNGEDEQGCAVTCEATQYLCNPP
RVINDTSVAATNSPQPSATHHYHRYCIAIKHVCDGTADCPDGDDELNCPKKRNCTATDKC
TQQCILTIDNKPACACQPGYKLGKDNATCEDINECVFEQDPVCSQTCNNTVGSFVCSCMA
GYVLRPDLRTCKALGANPTLLFANRVDIRQVSLSNSKYTAILKGLHNAIALDFHYKRSTV
YWSDLSMDVIRKAYVNGTGAEDVIRWGLESPTGVAVDWIHNLLFWTDSGTRRVEVITLDT
TMRHVLISSDLDKPRAIVVHPNYGYVYWTDWGPNPKIERADMDGSGRVVLVTESISWPNG
LAIDYTSDRLFWADAKHHIIESAHLDGTDRKKVIRKGVNHPFGITIFEDYVYWTDWHFKS
ISSANKGNGAGFKTIHSGLHFPMDVHSYHPQRQPEYKNRCGDNNGNCSHMCLPNSTGYSC
VCPVGLKIKRDGKNCASTPDNLLIFARKKDLRLRPVDQAARGFDTVIPVDHIESAVALTW
DSNEDTIYWTDVETDTISRAYLNGTNQSVIISYNLESPAGLAMDWITHKLYWTDAGTNRI
ECSNLDGSMRTLLVWRGLDKPRDIVVDPTVGYMYWSDWGEEQKIERAAMDGSDRKILVSK
NLTWPNGLAIDFEKNRLYWADGGTKKIEYSDLNGKGRTVLISTDLPHPFGLVIFKNKIFW
TDWDTQSIHQADKNDGSNRSVVRSGISGLMDVRVFHRHRKTINTPCNKNNGNCSHLCLLA
PAPRFYKCACPTGLVLESNGETCPDMPSEFLVFAHREDIRIISFDVNYTVDIVLPIANLK
NAIGVDVDRRTGDLYWTDTADDLIRKASFDGRTVETIINNGIENADSLVVDYIGQKIYWT
DAGLNSIEVAELDGINRKVLICSGLEKPRAIALYYPAGLLFWSDWGHNARIERANMDGEQ
RMTLIADDLIWPNGLAVDLIGNKLYWNDAKRSVIESAKLDGSNRKVLIHDVRHPYGLTLT
KDFVYWSDWHTKSLHRANRTTGSNKTVILSKIEGIMDIRSVSSEDLYIAENVCEKNNGGC
SHLCLRNPKGYSCACPTGILLNEDKKTCKLTPTNFILFATRETLARVSFDTPEMWDVTLP
ISDIHNAISVDFHWEKQIIIYCDVNLDIIRSINIQNLSDTRVIINSNLTTPSGLAVDWVA
NNLYWADTTRKVIEVARLDGSSRKRVLEQLDDPRALTLFPAKGYMYWTEWGEHPKIERSY
LDGSSRKVIISSDLGFPNGLALDYEKKKLYWADALKDRIETSDLHGQYRVQLVPEATHPF
GLTQYGDHIYWTDWYKKAVERADKTTGKNRIEIRTALDGVMEIKVVSAARQTGWTPCAVE
NGGCSHLCFFTRKNYVCACPDVKDSKPCSTVPSREVPIRKPGTENDPPEEDDDEPTMSSV
PTLVPRKPHHDITGRFPKLSPSNTNFTLKTVVITIVVMVVMIIVILIAIIHLLCQRKTKQ
KKYLYTGRSVLTFSNPNYNASSGDVGPSNSQQDKKSFIWKRLKYDKSQERVYEDNGQSSS
PEVVSLIPPSTTPSSSRAPSVTPRETSPPTSLPHVTHLDG
NT seq
6243 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgaggaatattcgaggtggccaagctggctccaccgttcaagctttccttttg
atctgttcaatcttcggcggctcgggaatgggacccgtcctgagctccgaagtcacgact
gacacaccagcgaataaaggagcagcgcgacagatgttcggtagtggcagcttgcggcag
acaggaagcgggcccatcgtcctggggacgacggagtcaccgttttacgacggacatttg
tacgagggccccggtgggtttggatacaacgtacccggcggcagaaaccacgtttcccaa
aaatcgcacccccagcttcccggtgggtatcacgggccgccaaggatgcccgtctctcaa
cccgatgctgatacctacgaggcttctagcgacgtgaaggtcagaaacggcgcaccggtc
aacggtctctacggtcaaagccgtcaaggtgtcggacgaggaatggacgcagaccgagga
cgaggcggcttcggcgacatttacgggggcatgggtggtcgaggcatggacgaaacatac
gtgaacccggatcgcacgcgcgtgcataacggactccaacgcggtcacggaataggagca
aatcccaacatcgaaggacattttggagtcggcggacgcactctgatccacgaattggag
gacgaaagcgatcttaccggagagtacctactgccctgcggatggcagtgcaaaagaagc
gagttcctttgcttgcagtcatgcacttgcatcccgttgaggagtcgttgcgacggagag
atagactgcgaggacttccaagacgaactggattgtgacaacgggtcgggatatggagga
aacgcggaatgcgtcggtgaaacaaaaattcgttgtccattgtctgggaagtgtatttcc
aaagattggctttgtgacggtgacgacgactgcggtgatttctccgatgaaagccactgc
ggaacatctcaaaattgcactgaggaccaattcgagtgcaaaaatggtctctgcgtccag
cgagcttggctttgcgatggcgagaatgactgcaaggatttttctgacgaagttaactgc
acgaaaaaagtggaatgcacacagtatgagttcaagtgtcaggatggaagctgcatcact
ttgaattggcattgcgaccaagaaccagactgtagcgatggttccgacgaggtgaactgc
gaaaaaaccggagttagttgtggcagcaatgaattccagtgcgcttatccaaaatgtgtg
cgacacgagtatcgctgtgacggtgatgacgactgcggtgatggaagtgacgagaaggat
tgtcctggatcattgacaaccagctgcaacgataatgaatttcgatgctctgggggcaag
tgcatcagcaacaaatgcgtatgtgacggaaacaaagactgtgacggtggtgaggatgag
gaaatgtgcaaccacccgacacctcagggatgttcacctcacaacgagttcacatgctcc
accggcacctgtgtcccgcgattgtgggtatgcgacggcgttcctgactgccctaatggt
gaagatgaacaaggatgcgcagtgacttgtgaggcgacccagtacttgtgcaacccgcct
cgagtaatcaacgatacatcagttgctgctactaactcgccccaaccatcagcgacgcat
cactatcaccgatattgcatcgctataaaacacgtctgcgatggtacagccgactgtccc
gatggtgatgatgaactcaactgtccaaagaaacgcaactgcactgcgacggacaagtgc
acgcagcaatgcatcttgacgatagataacaagccagcctgcgcttgccagcctgggtac
aagctggggaaagacaatgcgacatgcgaagatatcaacgaatgtgtattcgaacaagat
ccagtctgtagtcaaacttgcaacaataccgtaggctcattcgtctgcagctgtatggcc
ggttacgtcctccgacctgacctcagaacctgcaaggccttaggggcaaatcctacactc
ctttttgcgaaccgggttgatataagacaggttagtctcagcaattccaagtacacagct
atcctgaaggggttgcacaatgccattgctttggactttcattataaacgaagcactgtt
tactggtccgatctatccatggatgtcatacggaaggcgtatgtaaacggaaccggtgcc
gaagacgttattcgatggggcctggaaagtccaaccggtgttgctgtcgactggattcac
aatcttctgttctggactgactctggaacacgtagggtggaagtaataactttagataca
acaatgcggcacgtcctgatatctagtgacctcgacaagccacgggccatagttgttcat
ccaaactacggatacgtttactggacggattggggtccaaatccaaagatcgaacgtgca
gacatggacggttcaggcagggtcgttcttgttacggagtcgatatcctggccaaatggt
ctagcaatagattacacgtccgatcgcttattttgggcagacgcaaagcatcatattatc
gaatctgctcaccttgatgggacggataggaagaaggtcataaggaagggagttaaccat
ccctttggtatcaccatattcgaagactatgtctactggactgactggcacttcaagagc
atatcctctgcgaataagggaaacggtgctggattcaaaactattcattccggtcttcac
ttcccgatggacgtgcatagctatcatccgcaacgtcaacctgagtataaaaatcggtgt
ggtgataacaatggaaactgctcacacatgtgtctcccaaatagcaccggttacagttgc
gtctgtcctgtggggttgaagattaaacgagatggcaagaactgcgcctctactcccgac
aatcttctgatatttgcaaggaagaaggatctcagattacggccagtcgatcaggccgca
agaggattcgacactgttattcccgtcgatcatattgaaagcgctgtcgcacttacgtgg
gacagtaatgaagatactatatactggacagacgttgagacggacacgataagccgggcg
tacttaaacggcactaatcagagtgtcatcatcagttataacttagaatctccagctggt
ttggctatggattggataacgcacaagttatattggactgatgctgggacgaacagaatt
gagtgttcaaatttagatggatcgatgagaactctactggtatggagggggcttgacaaa
ccgagggacatcgtggtcgacccgactgtcgggtatatgtactggagcgattggggcgaa
gaacagaaaatagagagggccgcgatggacggcagtgatcgcaagattctcgtgagcaaa
aacttgacatggccaaatggattggcaatcgacttcgaaaagaaccggctctactgggca
gatggtggtaccaaaaaaatcgagtactctgacctgaatggcaaaggccgaaccgtacta
atctccactgacttgccgcatccctttggtttggtgattttcaaaaataaaatattttgg
accgactgggacacgcagagtattcatcaagcagataaaaacgacggttctaatcggagc
gtggttagatcaggaatatccggtctcatggacgtcagggtatttcaccgtcatcgaaag
actatcaacacaccttgcaataagaacaacggcaattgttcgcatttgtgtctgttggca
cccgctccgcgattctataaatgcgcgtgtccaactggtctggttttagagtcgaatgga
gagacatgtcctgatatgccgagtgaattcctagtattcgctcacagagaagacatcaga
ataatatctttcgacgtcaactacaccgtggacatagtactgccaatagcgaacctaaaa
aatgcaattggagtggatgtcgatagacgaaccggcgatctgtattggaccgatactgcc
gatgatctcatcaggaaagcaagttttgacggaagaactgtagaaacgataatcaacaac
ggaatcgagaacgccgacagtttggtcgtagattacataggtcaaaagatatactggaca
gacgctggactaaacagcatcgaagttgctgagctcgatggtataaacagaaaggttctg
atttgctcaggactagaaaaacctcgagctatcgctctgtactatccagctgggcttctt
ttctggtctgactggggtcacaacgcccgtatagaacgagctaatatggacggcgaacag
agaatgactttaatagccgacgaccttatctggccgaacggtttggccgttgacctaatt
gggaataaattgtactggaatgacgctaagagaagcgtgattgaaagcgccaagcttgat
ggttcaaatagaaaggttcttatccacgatgttcgtcacccttacgggttgacactgacc
aaggacttcgtttactggagcgactggcacacgaaatccttacaccgtgcgaatagaacg
acgggatctaacaaaacggtaatattgtccaaaatagagggaatcatggatattcggtca
gtcagcagcgaggatctttacatcgctgagaacgtgtgcgagaagaataatggcggatgc
tcacatttgtgccttcgcaacccgaaaggttactcgtgcgcttgtccgactggaatcctt
ttgaacgaggataaaaagacgtgcaaattgacccccacaaacttcatactgttcgcaacg
agggaaacgctcgccagagtgtcattcgacacgccagagatgtgggacgtgactttacca
atcagtgacatccacaatgcaatctcagtagattttcactgggaaaaacaaattataatt
tactgcgacgtaaacttggacataattaggagtatcaacatccaaaatttatccgacact
cgggtaatcataaactcgaatctcacaacgccgtcgggcctggccgttgactgggtcgct
aacaatctttactgggctgacaccaccaggaaagtgatcgaagttgccaggctggatggc
agcagtcgtaaaagagtcctggaacagctagacgacccaagagcgcttaccttgttcccg
gcaaagggatacatgtactggaccgaatggggtgaacatcccaaaattgaaaggtcttac
ctggacggttcgagtagaaaagtgatcatctcttcggacttgggctttccaaatggcttg
gctcttgattacgaaaagaaaaagttgtactgggccgatgcgttgaaggaccgaatcgag
acgtccgatttacacggacaatacagagtgcagctggtcccggaagcaactcatcctttc
ggcttgacgcaatacggggatcacatctactggacggattggtacaagaaggcagtggaa
cgagctgacaagaccactggaaaaaatcgaattgagattcgaactgcgctggacggagta
atggagatcaaagtcgtctcggccgcaaggcaaaccgggtggactccttgtgccgtggaa
aacggcggctgtagtcatttgtgcttctttacgcggaagaactacgtctgcgcttgtccg
gacgttaaggattccaaaccctgctcgacggtaccgagcagagaagtcccgataagaaaa
ccagggacagaaaacgatcccccggaggaagacgatgatgagccaaccatgtcgtctgtc
ccaactcttgtacctcggaagccgcatcacgatatcaccggcagattcccaaaactttcc
cctagtaatacaaatttcacattgaaaacggtggtaatcacgatagtcgtgatggtcgtt
atgataatcgtcattttaatcgccatcatccatcttctgtgccaacgcaagaccaaacag
aaaaaatacttgtacaccggaagaagtgtcctcactttttccaaccccaactacaacgct
tcaagcggcgacgtaggcccgagcaattcgcagcaagataaaaagtcgttcatctggaaa
agattgaagtacgacaagtcgcaggaaagagtgtacgaagataacggacagtcctcaagt
cccgaagtggtttccttgattcctccctcaacaactccgagcagcagtagagctccgtca
gtcacaccgagggaaacttcaccaccaacgtcacttccgcacgtcactcacctagacggt
tag
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integrated database retrieval system
