Neodiprion virginianus: 124308094
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Entry
124308094 CDS
T09046
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
nvg
Neodiprion virginianus
Pathway
nvg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124308094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nvg04121
]
124308094
Enzymes [BR:
nvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124308094
Ubiquitin system [BR:
nvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124308094
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124308094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_TEP1_C
zf-C3HC4_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
zf-C3HC4
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
zf-RING_UBOX
Beta-prop_CAF1B_HIR1
WD40_like
ANAPC4_WD40
zf-RING_2
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_DCAF12
WD40_RFWD3
zf-C3HC4_4
Beta-prop_WDR75_1st
RING_XB3-XBAT31
zf-RING_5
zf-C3HC4_3
Beta-prop_NUP159_NUP214
U-box
Beta-prop_IFT140_1st
Beta-prop_SCAP
zf-RING_10
Beta-prop_SPT8
zf-rbx1
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
124308094
NCBI-ProteinID:
XP_046626400
LinkDB
All DBs
Position
6:complement(21842803..21855828)
Genome browser
AA seq
695 aa
AA seq
DB search
MSVGDSGELESSGVGVGSGNEASPLSTTRRARSVKRLLQSANVLQGISGTLEDKNNDYLC
PICIEVMNEPHITRCGHTFCYPCIINSLEVNGRCPKCSFTLTQQDIFPNFVLNDLIAKYK
MRLKGPGDSGSGTGSTRVGGLSQTEIDMLIPVCDGLRGFVAAESANLTLPDVNVMLEVLM
QRKNLLEAESCATQNKLLHEFLRHLLRHKEDQRNQLAKEVALIKRDIEEVENILKEVQSK
CPRVEDLKKPSETDTAQVSAIKREMIELIDIIDSNMVKDGDLNPPDSCNNDLFASAMIQK
QNCATSILAIRRKRMHAHFDEFVQCYADTRIKDLLFEQSEKVQHQTETEPGTSSGLDVFR
DNLVKFLRYNSLRTLATLNYSSDVFNSSTIVSSIEFDKDNEYFAIAGVTKRIKVFDYGVA
VRDSVDIHYPCAEMICSSKISCVSWNSYHKGMLASADYEGTVTVWDTITGQRTKVFQEHE
KRCWSVDFNDVDTRLIASGSDDARVKLWSLNSDHSVASLEAKANICSVKFNPESSCHLAF
GSADHCVHYYDLRNLKEAICVFKGHRKAVSYVKFINKEEIVSASTDSQLKMWNINSPHCV
RTFVGHVNEKNFIGLATDGEYVACGSENNALYIYYKGLTKQLFSNKFNAARSVLEMQEKK
EEELNEFVSAVCWRQRSNVLVAANSQGIIKILELI
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttggtgacagtggcgaacttgaaagcagcggtgtgggtgttggctcaggtaac
gaggcttcgccattatccaccactcgacgtgcgcggagtgttaaacgtttattgcaatct
gcgaatgtactccaaggtatcagtggtacccttgaagacaaaaataatgattatctatgc
cccatatgtatcgaagtgatgaatgaaccacacatcactcgatgcggtcacacattttgc
tacccatgtattatcaattcgctcgaagtcaatggccgctgcccgaaatgtagtttcaca
ctgacccagcaggatatatttcctaatttcgtattgaacgatttgatcgcaaagtataaa
atgcgattgaaaggccctggtgattcgggaagcggtacaggaagtaccagagttggaggt
ctttctcaaacagaaatcgatatgctcattccagtatgtgatggactgagaggctttgta
gcagcggaaagtgctaatttaactttaccagatgtaaatgtaatgctggaggtccttatg
cagaggaaaaatttactcgaagccgaatcctgcgcaactcaaaataaattgcttcacgaa
tttctgagacatttgctcaggcacaaagaggaccaaagaaatcagttggcgaaggaagtc
gctttgatcaagcgtgacattgaggaagttgaaaatattttaaaagaagttcagagcaaa
tgccctcgtgttgaggatttgaaaaaacctagcgaaactgatactgcacaagtttcggct
atcaagcgagaaatgatcgagctaattgatatcatagactcaaacatggttaaggatgga
gacctaaatccaccggattcgtgcaataacgatctttttgcttcagccatgatacagaaa
caaaactgtgccacttcaatcttggcaattcgccggaagagaatgcatgcacattttgac
gaatttgttcaatgctacgctgacactcgtatcaaagatctactttttgaacagtccgaa
aaggtccagcaccaaacagaaacagaaccaggaactagttctggattagatgtattcagg
gataatttagttaagtttttaaggtataactctttgcgaacattagctacattgaattat
tcatcggatgtgtttaatagctctactatcgtatcgagtatagagtttgacaaagataac
gaatactttgctattgctggtgtcacaaaacgcatcaaagtgtttgattacggagtagcg
gtacgagatagtgttgacattcattatccgtgcgctgaaatgatatgtagttcaaagata
tcgtgcgtctcgtggaattcctatcataaaggaatgttggcttctgctgattacgaggga
acagtcactgtatgggatactataactggtcaacgtaccaaagtatttcaagaacatgag
aaacgttgctggtccgtcgacttcaacgatgttgacacaaggctgatagcttcaggatcg
gatgatgcgagggtgaaattatggtccctcaacagtgaccactctgtagcttcactcgag
gctaaggcaaatatttgttctgttaaatttaatccagaaagctcttgtcatttagcgttt
ggatcagcggatcattgtgtgcattattatgatttgcgtaacctgaaggaagcgatatgt
gtatttaaaggccaccgcaaagctgtgtcctatgttaaattcataaacaaagaagaaatt
gtttctgcaagtacagattctcagttgaaaatgtggaacatcaatagtcctcactgtgtt
aggacttttgtgggtcacgtaaatgagaagaacttcatcggcctagcaacagacggtgaa
tacgttgcgtgtgggtcagaaaataatgcactgtatatttattacaagggattaacgaaa
caactgttctcaaataagtttaatgctgcaagaagtgttttagagatgcaagaaaaaaag
gaggaagaacttaatgaatttgtatcagctgtctgttggagacaaaggtctaatgtttta
gtagcagctaattctcagggtattattaaaattttggaacttatttga
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