Neodiprion virginianus: 124308109
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Entry
124308109 CDS
T09046
Name
(RefSeq) nucleolysin TIA-1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvg03019
]
124308109
03041 Spliceosome [BR:
nvg03041
]
124308109
Messenger RNA biogenesis [BR:
nvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
124308109
Spliceosome [BR:
nvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124308109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
124308109
NCBI-ProteinID:
XP_046626435
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All DBs
Position
6:complement(29262758..29558737)
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AA seq
457 aa
AA seq
DB search
MLFVPFTVPTFPTASHQTSHQNSHQTSHQVQQHQQQLGSNQAGQQQSQLNHLNLNHLNHI
NQVIPQGSVQQPIHSTSCSPQQQAATPNKEMKVNWATSPGNQPKQDTSKHYHIFVGDLSP
EIETQTLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKAEAESAIGAMNGQWLGSR
SIRTNWATRKPPAPKSEANSKPLTFDEVYNQSSPTNCTVYCGGLTNGLTEELMQKTFSPF
GSIQEIRVFKDKGYAFVRFSTKESATHAIVAVHNTDINGQTVKCSWGKESGDPNNAQQTG
QTLTSATYPYYAAAAAAAAAAAGVAGVAGVGSGIGGAGQLGYWYPPQSYPTTATQMQAAG
GFLQGMQGYTYGQFAGYQQAQYMGMGMGVHAAGTAAGWGQGLPGGPQLPPHHATTVSAPP
GVQAAAPPPPPPAQMMAYPMQQFQLADEDWLAPSLLV
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgctgttcgttccgttcacggtacccacctttcccaccgcctcgcaccagacctcgcac
cagaattcccaccagacgagccaccaggtacagcagcaccagcagcagctcgggtccaac
caggccgggcagcagcagagtcagctgaaccacctcaaccttaaccacctgaaccacatc
aaccaggtcataccccagggatccgttcagcagccgattcacagcacgagctgttccccg
cagcagcaggccgcaacaccaaacaaggaaatgaaagtcaactgggcgacgtctcctggc
aatcagccgaagcaggacacaagtaaacactaccacatattcgtcggcgacctaagcccg
gaaatcgagacccagacactgagggaggccttcacccctttcggggagatctcagactgc
agagtggtaagggatccccagacgctaaagtcgaaaggatatggattcgtctcgttcgtt
aaaaaagcggaggcggagagcgccatcggtgccatgaacggtcagtggcttgggagtcgc
agcatccgcaccaactgggcgacccgcaaaccaccggcgccaaagtctgaagcaaactca
aagccgctcactttcgacgaagtttataatcaaagcagccccacaaactgcaccgtctac
tgcggaggcctcacaaacggtctcaccgaagaactcatgcagaaaaccttttcgcccttc
ggctccatacaggagatacgcgtcttcaaggataagggatacgcgtttgtcaggttctcc
acgaaagaatcggcgacgcacgccatagtcgcggtccacaacaccgacataaacggacag
acggtgaagtgcagctggggaaaggagagcggagatccgaacaacgcccagcaaaccgga
cagacgctcacctcagcgacctacccctactacgcggcggcggcggcagccgctgcggcc
gcagctggtgtcgcgggggtggcgggggtcggaagtggaatcggcggtgccggacagctc
ggctactggtatccaccccagtcgtatccgacaaccgcgacacagatgcaggccgcaggt
ggattcctccaggggatgcagggttacacctacggacagttcgcggggtaccaacaggcc
caatacatggggatggggatgggtgttcatgcggcgggaacggccgctggttggggccag
ggacttcccggaggccctcagcttcccccgcaccacgcaaccaccgtgtcggcgcccccc
ggcgtccaggcggcagcaccacccccgcccccgcccgcccagatgatggcctaccccatg
caacagttccagctagcggatgaggactggctggcgcctagtcttctagtgtga
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