Neodiprion virginianus: 124308178
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Entry
124308178 CDS
T09046
Name
(RefSeq) putative elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nvg03016
]
124308178
Transfer RNA biogenesis [BR:
nvg03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
124308178
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
TPR_GEMI5
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
124308178
NCBI-ProteinID:
XP_046626577
LinkDB
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Position
6:19647330..19652945
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AA seq
1350 aa
AA seq
DB search
MKNLRVLQQSYIELKNLEASLDSEVLTSLTAEILCCLDNDGGGFYVYKNNNVYHIATGIF
EYFHVGNENVVDSKLVGFAFCDSTRQIYLAYSCGRLFTIEIDLPDPQAEFSAQINEGLCA
IKLSPDHEIITLVTANDTVIVMTSGFHVITEFDLNSTTFGEKQFVTVGWGKKETQFHGSE
GKSAAKAKPSSIEKSDSDDGLPRVSWRGDSMLFAVSFLTKETNIRLFKVFSREGVLQYTS
EPSSGLEENLAWKPSGNLIAITQRFPNKHVVSFFEKNGLKHREFTLPFEPKEIMVKDLQW
STDSDILAIWCLNINDGSTRVQLWTENNYHWYLKQTILFSKNNPLLHISWSTVSGCEKKL
LVLTKLKYLVYTFCWTVSHSRGTNQTDKALVGVIDGDRALLTGFRDAVVPPPMAHQALQI
DEPINEVVFAPEIQNKDSWMNSNVLFTLLENNQLAFYKQVPNLVEYGHIKTYKIEWEIPN
PIPESVPYSMHHYLWYKEDTILCTAPLGLNSVLCIIDIDGINPEKNGRLVVRDVHTVTGA
IQHIVSSPDPDLVYIVAEGSILTYSRGKGVNPTGITLNESCHQVEVIQVDDKHIVLCLSE
KYCLFVDGKEIANNITSFFVHTEFLLLTTLQHVLVSIALDGNGFQKLLTHDLTVEPREGT
DNEKMVSGLSLRRVERGSKLIMAVPKDTRTILQMPRGNLECIQPRALSLYVIGTYLNELN
YHAAFDLIRKQRINLNLIFDHDPDLFIANAEKFIEDIKNPNWLSLFLSELQEEDVTSTMY
SSCYSRKVKQNHILNQVPSSTDKLTISSGKCEENSPSKNKVEHVCELLRNHMEARLDADR
LLLPILTSLVKKHEVKDLEAALVKVKAIKKLESQSEAKLHSSSEEALKYLLYLVDVNTLF
DIALGMYDFDLVMLVAAKSQKDPKEYVPFLNDLRQLDEDYMRFSIDVHLKRYESALNNIS
KCKDRFDECKILIKTQNLHSKALKLFKSNSKEYKEIAEIYGEYLIASRKFQEAAIMFTRS
NNLVKALNAFKLAGDWREAIVIAQEMKLSVTDLQCLYQDLVRQLKDTRKYADAAIILMHY
LHEPEDTVATLCEGKLWHEALRIAYQVERLDIIETHIKPGVQEHADYMISKIIKNQTDFI
KFRERLSIVRAEKSLKELQLRDVGDGDHEFNPMMGDSDLFSDTSSIAGSMTSRGSQSSRL
SGKSYRSSKNRRKHERKLHSLREGSIYEDLALISALHGIVTTTYADRAEINSLMRILLRF
YNDGCAEKLQNSMEELLNQIESGKLEIWSEYLHNGSADSALGTHFESSQPGQGDVPEPSL
EPHLRYPPVANPSIWQLDVISSKPKSISNT
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacttgagagtgttgcaacaaagttacatagaactcaaaaatttggaagctagt
ctcgattccgaagtcctaacatcattaacagcagagattctttgctgtctcgataacgac
ggtggtgggttttatgtgtacaaaaacaacaacgtttaccatatcgccactggaatattc
gaatattttcacgttggaaatgaaaatgttgtcgattcaaagctcgtgggcttcgctttt
tgtgacagtacgcgacagatttatctggcctattcttgtggaagacttttcaccatcgag
atcgatctcccagatccacaggcggaattttctgcgcaaatcaacgaaggcttgtgtgcc
ataaaattaagccctgatcacgaaattatcacacttgtcacagcaaatgataccgttatt
gtaatgacatctggctttcatgtaattactgagtttgacttaaattcgaccacatttgga
gagaaacaattcgtgaccgtcgggtggggcaaaaaagagactcagtttcatggttcggaa
ggaaaatctgctgccaaagctaagccatcgtccatagaaaagtccgactcagacgatgga
ctacctcgagtttcttggcgaggagacagcatgctctttgccgttagttttcttacaaag
gaaacaaacattcgattattcaaagtgtttagcagggaaggagtcctccaatatacaagc
gagcctagctcaggactagaagaaaatttagcgtggaaaccatctggaaatttgatcgca
atcacacagaggtttcctaacaagcatgttgtatcattctttgaaaaaaatggtctgaaa
cacagagagttcactttaccatttgagcccaaagaaattatggtaaaggatttgcaatgg
tccacggattcagatatcctagcaatttggtgcctaaatataaatgacggtagtacgcgc
gttcagttgtggactgaaaacaattaccactggtacttgaagcagactatattgttctcg
aagaataatccactcttgcatatatcttggagtacagtatctggatgtgaaaaaaaactg
ctcgttttaacaaagctaaaatatttagtctacactttttgttggactgttagccacagt
cgaggcacaaaccaaactgataaagcccttgtcggagttatcgatggcgatcgagcactt
ctgacaggttttagagacgctgttgtgccgccacctatggctcaccaggctctacaaatt
gacgagcccattaacgaagttgtttttgcacctgaaattcaaaataaggatagctggatg
aactcaaatgttttattcacactgttagaaaataatcagttggcattttataaacaggta
ccaaaccttgtggaatatggccatatcaaaacttacaaaatcgaatgggaaatacctaat
ccgattccagaatcagtgccatattctatgcatcactatttgtggtataaagaagataca
attttgtgcacggcaccactagggctcaattctgtactctgcattattgatatagatggt
atcaatcctgaaaagaatggtcgtcttgttgtgcgagacgtccacacagttacaggtgct
attcaacacattgtttccagtcctgatccagacctagtttacattgttgctgagggttct
atattaacatacagcagaggcaaaggcgttaacccaacagggataactcttaatgaatct
tgccaccaagtggaggtgatccaagttgatgacaaacatattgttttatgcctcagcgag
aagtactgtttatttgttgatggcaaagaaattgctaacaatataaccagcttctttgtg
catacggaatttttgttattaaccacactccaacatgttttggtaagcattgcgctggat
ggcaatggattccagaagttattaacacatgatctgactgttgaaccaagagaaggtaca
gataacgaaaaaatggtctcaggtttgagtctgaggcgtgtagaacgaggatcaaaattg
ataatggctgtaccaaaagataccagaactattttgcaaatgcctcgtggaaatttagag
tgtattcaacccagagctctatctctatacgttattggtacatatttgaatgagttgaat
taccatgctgcttttgatttgatccggaaacagaggattaatttgaatttgatatttgat
catgatccagatttgtttattgcaaatgctgaaaagtttattgaggatataaaaaatcca
aactggttgagcctgtttctatcagaattgcaagaagaagatgttacctctacaatgtac
tcgagttgttactcccgcaaagtaaaacagaaccacatattgaatcaagtacctagttct
acagataagctgacaatttcttctggcaaatgtgaagaaaattcgccaagtaaaaataag
gtcgaacacgtttgtgaacttctgagaaatcatatggaggcaagacttgatgcagacaga
ttgctgctaccgattcttactagcttggtaaaaaaacacgaggtcaaagatttggaagca
gctctggtgaaagtgaaggcgattaaaaagttggaaagtcaatctgaagcgaagctgcac
agttcatcggaagaagcgttgaaatatttgctgtacttagttgacgttaacacattgttt
gatattgcccttggaatgtatgatttcgacttggtgatgctcgtcgcagcaaaatctcaa
aaagaccctaaggaatacgtcccgtttctaaatgatttacgacaattggatgaagattac
atgcggttttctatcgacgtacacttgaaacgttatgaaagtgctttgaataatatctca
aagtgtaaagatcgttttgatgaatgtaaaattttgattaaaacgcaaaatttacattcc
aaagcattgaaattgtttaaatcaaacagcaaagagtacaaagaaatcgctgaaatttac
ggagaatatctcatcgcgtcgagaaaatttcaagaagcagcaattatgtttactcggagt
aataatctcgttaaagctttgaatgcttttaagttggctggggattggcgtgaagctatc
gtcattgcgcaggaaatgaagttgagtgttacagatttgcagtgtttatatcaggattta
gtaaggcagttgaaagacaccagaaaatatgctgatgctgccattattttaatgcactat
ttgcacgaacccgaagacactgttgctactttgtgcgaaggcaagctgtggcacgaagca
ttgaggatcgcttatcaagtagagcgcctggatataattgaaactcacataaagcctggt
gttcaagagcatgctgactacatgatttcaaaaattattaaaaatcaaacagattttatc
aagttcagagagcgattgagcattgttagagccgaaaagtcactgaaagaattgcaacta
agagatgttggtgatggagatcacgagttcaaccctatgatgggagactctgatttgttt
agtgacacaagtagcattgctggatcaatgacaagccgtgggtctcagtcttctagacta
tctggaaaaagttatcgatctagtaaaaacaggagaaaacatgaacgaaaacttcacagt
ttgcgtgaaggcagtatatacgaagatttagctctaataagtgcattgcatggaatcgta
accacaacttacgcagacagagcggagattaactcactcatgaggatattgctgcgattc
tataacgacggttgtgcagaaaagttgcaaaattcgatggaagaattattgaatcaaatt
gaaagtggaaaactggaaatctggtctgagtacctgcataatggttctgcagattctgca
ctgggtacacatttcgaaagttctcaacctggacaaggagacgtacctgagccatctttg
gaaccgcatttgcggtatccacctgtagcaaatcccagtatctggcaactcgacgtgata
tcatcaaagccaaagtcaatatcaaacacttaa
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