Neodiprion virginianus: 124308406
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Entry
124308406 CDS
T09046
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin B isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
nvg
Neodiprion virginianus
Pathway
nvg04120
Ubiquitin mediated proteolysis
nvg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124308406
04120 Ubiquitin mediated proteolysis
124308406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nvg04121
]
124308406
Enzymes [BR:
nvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124308406
Ubiquitin system [BR:
nvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124308406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-ANAPC11
zf-RING_Vps41
zf-RING_5
zf-RING-like
zf-RING_15
zf-HC5HC2H
Prok-RING_4
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
124308406
NCBI-ProteinID:
XP_046627065
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All DBs
Position
7:1233688..1236825
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AA seq
595 aa
AA seq
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MRTAGITLISVALTCAVIGNAYYQKKQFYPSVVYITKSNPSMAVIYVQGLILVFIMNTFL
RKIFFGNLRAAELEHLVERAWYAVTETCLAFTVFRDDFSPKFIALFTLLLFLKSFHWLAE
DRVDFMERSPVITWLFHVRVLSLLTLLFTINGTMIEYAYMSTLTKGASVQLVFGFEYAIL
LTVVLNITIKYVLHTVDLQSENPWDNKAVFLLYTELIIGLLKVILYVAFVTIMVRIYTLP
LFAFRPMYYTMRNFKKAFHDVVMSRRAIRNMNTLYPDATPEELAAADNVCIICREEMFTA
SKKLPCNHIFHTACLRSWFQRQQTCPTCRLNILRPTPANNGPRAQNQAPAPGQQAPQAAQ
AQGVNQQVDQPFQMPAGFWMGLQAQQGAGAQIQGQNNAPNIGLPPFQSVPPGSLPLFVPP
FPPMVHLPPVPAPPPNLTTLTDEELRAMEGNMRQAVEARIQTLQRVQLLLDAANAMMSQY
QTAAATANIPGPHVGSAAETAEKEKKEEKANHSEDAGPSMSEQGKFAGEPLPGSSGVSNE
SIVQTDTKTMNATTSNENHATPSTSRTRTEPTDEKEMLRRRRLQKFIAQTTTTTD
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgaggacagccggtatcactttaataagcgttgcgctaacctgcgccgtcatcggcaat
gcctattaccagaagaaacagttctacccgtccgtcgtctacataaccaagtccaacccc
agtatggccgtaatatacgtccaggggttgatactggtttttataatgaatacgttccta
cgcaagatattctttggtaatctccgagccgctgaacttgagcatctggttgagcgggcc
tggtacgcagtgacggagacctgtcttgctttcacggtattcagggacgacttcagcccc
aagttcatagccctttttacgttgctgctgtttctcaaatcatttcactggctcgccgag
gatcgagtcgattttatggaaagaagtcccgtgataacctggttgttccatgtgagggtc
ttgagcctcttgactcttttattcacgataaatggaacgatgatcgagtatgcctatatg
tcgaccctcaccaaaggcgcatctgtgcagctcgtctttggctttgaatacgccatactc
cttactgtcgttctcaacatcaccatcaagtatgtgctccacacggtcgatcttcagagt
gaaaatccctgggataacaaggcagtttttctgctctacacggaactgattattgggcta
ttgaaggtgatcttgtacgttgcgtttgtcaccataatggtcaggatatacacactaccg
ttatttgccttccgcccgatgtactacacaatgcgcaatttcaagaaagcattccacgac
gtggtgatgtcgagaagagcaatcaggaacatgaacacgttgtatccagacgcgactccg
gaggaattagcagccgcggacaatgtctgcattatttgcagggaagagatgtttactgct
agtaaaaaacttccctgcaaccacatattccacaccgcctgcctccgatcttggtttcaa
cgtcagcaaacctgcccaacatgcagattgaacatcttgcgacccacaccagccaataat
ggcccgagggcccagaatcaggctcctgcgccgggtcaacaagccccgcaagcagcccag
gcacaaggtgttaatcagcaagttgatcagccatttcaaatgccagctggcttctggatg
ggtcttcaagcacagcaaggagctggcgcgcagatccagggccagaataacgcccccaac
atcggtttgcctccgttccaatctgtgcctccaggcagcttgccacttttcgtgccacct
tttcctccgatggttcacctgcctcctgttcctgctcctcctcccaatctgaccacactc
accgacgaagagctccgggcaatggagggtaatatgcgccaggcagttgaggccagaatt
caaacacttcagcgagttcagcttttgcttgacgctgccaacgccatgatgagccagtac
caaactgctgctgctactgccaacattccagggccacacgtggggtcggcggctgaaacg
gcggagaaggaaaagaaggaagagaaggcgaatcacagcgaggatgcggggccgagtatg
agcgagcagggcaaatttgccggtgaacctttacctggtagcagtggtgtgtcgaacgag
agtattgtgcaaacggatacgaagacaatgaacgcaacaacgtcaaacgagaatcacgcg
actccgtccacgtcgagaacaagaacagaaccaactgacgagaaggagatgttgaggaga
aggcggttgcaaaaattcatagcacaaacaacgacgacgacggattga
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