Neodiprion virginianus: 124308439
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Entry
124308439 CDS
T09046
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4-like
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
nvg
Neodiprion virginianus
Pathway
nvg04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124308439
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nvg04990
]
124308439
Domain-containing proteins not elsewhere classified [BR:
nvg04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
124308439
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
TSP1_CCN
ADAMTS_CR_3
TSP1_spondin
PLAC
Motif
Other DBs
NCBI-GeneID:
124308439
NCBI-ProteinID:
XP_046627109
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All DBs
Position
7:complement(18861046..18929807)
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AA seq
901 aa
AA seq
DB search
MEETTAMMTMISDRSKIRTMLFAHIGLVILSSIVWQTVNCDEYRNYPIQVHQMFQEKMLR
SSENMERVRGNWGSWAAWSDCSRSCGTGIQSQARDCVPMRGYLRKRSIASIEGQRSEIKP
FCIGTYKRYHVCNTQECPDFGDIRAEQCAKYNGKFYKGQSYQWEPFPDAPNDCALNCRAV
GERFYATLEPAVLDGTPCRGNPRRRSRVPRVLAVGAADRWLCVGGQCKSVGCDGVVGSGR
VYDACGVCGGEGNSCRLFEGIFLEPKLSAGHQLVTTIPKGAISINVTEIRPSKNALALRG
ANGSFILNAPSPSSLLSSSGAYEGAGTVFSYRRGNLMHAENIWTEGPLEEPVDLMILSEE
LNPGILYKYMLPVEEKFEDIAMLAPPVLVTGPNEKIGNEIPEHSAHVVTPPVDPNMTKSE
GGKDAASGRIDDEAVDKRNSNQSNAIGKMAGDQPMQKKLIGKDERNRKKNRKKKKFFWKI
ASLSPCSKACGGGVQYATFKCFRESTQATAPERRCKNVARPPSPPPLRCNTLPCPARWRA
GPWSQCSVTCGTGIQTRKLECVQELNPKLTMRVASGACIEKPDLKTTTQCRLTSCIFPRA
PPEARQMHPQVEAIPKESHWTTGNWGECSSTCGPAIRKREVICITAGSTTCPDETRPANK
TTCDSLPECNRIPAQNAPWLYTDWSSQCSAECGIGLRTRQIVCSDVNEVFCDASKKPNLV
QSCTGNGTHCDRMRYQWFVGAWSPCTVSCGPGSQHRDVACLASKGGDLKIVGETNCRELT
RPETDQRCLRPPCPVEWFTSDWSECTQSCGAGTQSRVVRCLFEGVPTTGCAKSSEPKSRR
TCEKQPCKSKANFDIPPKPPKKVHEKSDCVDKYPNCSLVLKARLCRIKYYKHSCCGCRDH
L
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaacaacagcgatgatgacgatgataagcgatcgctcgaagattcgcacgatg
ctattcgcgcatattggattggtcatcctttcttcgatcgtttggcaaacggtcaattgc
gacgagtacagaaattatccaattcaggtgcatcagatgtttcaagaaaaaatgcttcgc
agttcggaaaacatggaacgagtcagagggaattggggaagctgggctgcgtggtcggat
tgttctcgatcctgtgggaccgggatacagtcccaggctagagattgcgttccgatgcgg
ggttatttgcggaaacgcagcatcgccagtatcgagggtcagagatcggaaatcaagccg
ttttgcatcgggacttacaaacgatatcacgtctgcaatactcaggagtgtccagatttt
ggggatatcagagctgaacaatgcgccaagtacaacggaaaattttacaaggggcagagt
tatcagtgggaaccatttcctgatgctccgaacgactgcgcgttgaactgccgggctgta
ggagagcgattttacgccaccctggaaccggccgtcctggacgggacgccgtgtagagga
aacccacgacgacgctcccgggttcccagagtccttgccgtaggcgccgccgatcgttgg
ctctgtgtcgggggccagtgcaagtcggttggatgtgacggtgtcgttggttcgggtcga
gtctatgacgcctgcggtgtttgcggaggtgaaggaaacagctgtcgacttttcgaaggt
atttttttagagccaaaattatcggccggtcatcagctcgtgacgaccattccaaaggga
gcaatttcgataaacgtcacggagattcggccgtctaaaaacgctctagcattgagaggc
gcgaatggcagcttcatactcaacgctccgtctccgtcgtctttgctgagttcgtctgga
gcttacgaaggtgccgggactgttttttcatatcgtcgtggaaacctgatgcatgccgaa
aatatttggaccgaaggtccactcgaagagcccgtagacctaatgattttatccgaagaa
ttgaatccagggatattgtataaatacatgctgccggttgaggagaaatttgaagacatc
gcgatgctcgcaccgcctgtactcgttactggtcccaatgagaaaatcggcaacgaaatt
ccggaacattctgcccacgttgtgacgccgccagtggatcccaatatgaccaagtccgaa
ggtggtaaggatgctgcttcgggtcgtatagacgacgaggccgttgataaaaggaactcg
aatcaatctaacgcgataggaaaaatggccggcgatcaaccgatgcagaaaaaattgatt
ggcaaggatgaacgaaataggaagaagaacaggaagaagaaaaagttcttctggaaaata
gcctcattgtctccttgctccaaggcctgtggcggcggcgtgcaatacgcgacgttcaaa
tgcttccgagaaagcacgcaggcaacggcgcccgaaagaagatgcaaaaacgttgctcga
ccaccttctccaccgcctttaaggtgcaacacgctgccgtgtcccgcaagatggcgagcc
ggtccgtggagtcagtgttcggtgacttgcggcaccggaattcagacccgaaagctcgaa
tgcgttcaggagttgaaccccaagttgacaatgcgcgttgcttccggtgcttgcatcgag
aaacccgatttaaaaacgaccactcagtgcaggctaacttcctgcatatttcctcgggct
cctcctgaggcgagacaaatgcatccgcaggtcgaagccatcccgaaggaatcccattgg
acgaccggaaattggggagaatgttcgagcacctgtggtccggcgattcgtaaacgagag
gtgatatgcataacagcaggatcgacaacctgccccgatgaaacaagacccgcgaacaaa
acaacttgcgattctttacccgagtgcaacaggatccctgctcaaaatgcgccctggctg
tacacagactggtcgtctcagtgttccgctgagtgcggaatcggtttgcgaactcgtcaa
atcgtctgtagtgacgttaacgaggtgttttgcgacgcctcgaaaaaaccaaaccttgtc
caatcttgtaccggaaatggtacacactgtgaccggatgcggtatcagtggttcgttgga
gcttggagtccgtgcaccgttagctgcggtcccggttctcagcatcgcgacgtggcttgc
ctagcgtcaaagggtggcgatttgaaaatcgtcggggaaaccaattgtcgcgaattgacg
cggcctgaaacagatcagagatgcctaaggccgccgtgtcccgtagaatggttcacatcc
gactggtccgagtgcacccagagctgtggggccggcacgcagagccgagttgttcgttgt
cttttcgaaggagttccgaccaccggttgtgcaaaatctagcgaaccaaaatctcgaaga
acgtgcgaaaagcagccatgcaaatcgaaggccaatttcgacattccgccgaaaccaccg
aaaaaggttcacgaaaagtccgactgcgttgacaaatatccaaattgtagtctggtcttg
aaggctcgattgtgtcgaataaagtactacaagcattcctgctgcggctgccgcgaccat
ctatga
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