Neodiprion virginianus: 124308958
Help
Entry
124308958 CDS
T09046
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nvg01009
]
124308958
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvg03021
]
124308958
Enzymes [BR:
nvg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
124308958
Protein phosphatases and associated proteins [BR:
nvg01009
]
HAD phosphatases
Fcp/Scp phosphatases
124308958
Transcription machinery [BR:
nvg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
124308958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
BRCT
PTCB-BRCT
BSH_Fcp1
BRCT_2
BBIP10
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
124308958
NCBI-ProteinID:
XP_046628108
LinkDB
All DBs
Position
7:complement(23147685..23151460)
Genome browser
AA seq
790 aa
AA seq
DB search
MATVKIAFPAGGEPGRITKWRVGMNAMVSAGRVVLHYRSVSVGGEPSKDPEKKLRASKFG
RVIKVLANEGDVLQPGQEVLLLEGCKHPTVMKDLCAECGADLREEFAGDDGQNAVTSQAS
VPMVHSVPELKVCPELAEKIGREDEKRLLQDRKLALLVDLDQTIVHTTNDNVPPDMKDVY
HFQLYGPHSPWYHTKLRPGTREFLAKMSRLYELHICTFGARNYAHTVAALLDKDGVLFSH
RILSRDECFDPASKTANLKALFPCGDSMVCIIDDREDVWQGCGNLVQVKPYHFFRHSGDI
HAPPGLAKRDQFPQLKTTSLDEINESETRVKVTENGALPNIDCQDFQTLEENSNKQKTED
ETKEEKDVIELELQVETAELKPNKINEGEQKEQTVESKAPELGEKLTEPDEGKANNADKD
SAIVGEQGPKKEELVSGDPEKLVESGEVKRKAAEEESFKDLEKRQELEDHDDYLLYLEDI
LRRIHAEFYSKQETDAESNKSLRDIIPRVRGRVLKGLRLTFSGIVATHQKLHQSRAYKVA
RALGAEVSQDLQENTTHLVAIKPGTAKVYAAKRMWQVKIVNPDWLWTCAERWECVDERLY
PLTKKARGSRVPPPHCSSPDRIDDQETEGGDRFADSINPLMSFTLEEIANMDKEVEEDMS
DQELETSAPISQIETSQTQHRRRRSATPDSLNEDCEDEEALTSKRRKIGTLEELDDNSST
EGKKVSDGDEDEDDPDDEDDPLTRFRRGEGSLDGFDLGDDSQDSMEVAATEDDGEWNEMG
AALEREFLSE
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggtgaagatcgcgttcccggctggtggagaaccaggtaggatcacgaagtgg
agggtcgggatgaacgcgatggtgtcagctggcagagttgtcctccattaccgcagcgta
tccgttggcggggaaccttccaaagatccggagaagaagcttcgcgcctccaaatttgga
cgtgttataaaagtcctcgcaaacgaaggcgacgttcttcagcccgggcaagaggttttg
ttgcttgagggatgcaaacatcctacagtcatgaaagatctgtgcgccgaatgcggtgcg
gatcttcgggaagaatttgctggggatgatgggcagaacgcggtcacttcccaggctagt
gtacctatggtgcactccgttcctgaacttaaggtttgccctgaactcgcggagaaaatt
ggcagagaagatgaaaagcgtttgttgcaagatagaaaattggctttacttgttgatctg
gatcaaacgatagtccacactaccaatgacaacgttccgcctgatatgaaagatgtctac
cactttcaactctacggacctcactctccgtggtatcacacaaaattaaggcctggaaca
agagaatttcttgccaaaatgagtcgcctttacgaattgcacatttgtactttcggagct
cgaaattatgctcataccgtggctgccctactcgataaagatggggtactattttctcac
aggattctttcgagagatgagtgtttcgacccagcatctaaaactgcaaaccttaaggcc
ctgtttccttgcggcgattctatggtctgcattatagacgatagagaggatgtctggcaa
ggttgtggtaatttggtacaggtaaaaccctaccatttctttcgccacagcggggacatt
cacgctccaccaggacttgctaaacgggatcaatttccgcaactgaaaaccactagtttg
gatgagataaatgagtcggaaactagagttaaagtaacggaaaatggagccttaccgaat
atcgactgccaagattttcaaacacttgaggagaattctaacaaacagaaaactgaggat
gaaacaaaggaggaaaaagatgtaatagaactggaacttcaagtagaaactgcagaattg
aaaccgaataagattaatgagggagaacagaaggaacagactgtggaaagtaaagcccct
gaacttggtgagaagctaacagaaccagacgagggaaaagcaaataatgcagacaaagat
tcggcgattgttggtgaacagggaccaaaaaaggaggaattggtatcaggtgatcccgag
aaactggtcgagtcaggagaagtcaaaagaaaagctgcggaagaagagagctttaaagat
ctagagaagagacaggaattagaggaccacgatgattatcttctgtacctagaagacata
ttgcgcagaatacacgcagaattttacagcaagcaggagactgatgcagaatccaacaag
agccttcgagatatcatcccacgggtgcgaggacgagttttaaagggactgcgactcacg
tttagcggcatagtcgctacccatcaaaagttgcatcaaagccgagcctacaaagttgcc
agagcacttggcgcagaagtatctcaggatctgcaggaaaacacgacgcatttggtggcg
ataaaaccaggaacggcaaaggtttatgcagccaaaagaatgtggcaagtgaaaatagtg
aatcccgattggctgtggacttgtgcagagcgatgggaatgtgttgatgagcgtctctat
ccgcttaccaagaaggctcgtggatccagggtacccccgccgcactgcagcagtccagac
cgaattgacgaccaagagacagaggggggcgacaggtttgcagacagcataaatcccctc
atgtcattcacactagaggagattgcaaatatggacaaagaggtggaggaagatatgagt
gaccaagagctagaaacatctgcacctatttctcaaattgaaacatcccaaacacaacac
cgtcgacgtagatcggcaacgccggattcgttaaatgaggattgcgaagatgaggaagca
ttgactagcaagagaagaaaaattggtaccttagaagaactcgatgataactcttctacg
gaaggtaaaaaagtaagcgatggtgatgaggacgaagatgacccagatgatgaggatgat
cctttgacaaggttcagacgaggcgaaggatccctggatggcttcgacttgggagatgac
tctcaggattctatggaggtggctgcaactgaggatgatggtgaatggaacgaaatgggc
gccgctttggagcgagaattcttgtctgaataa
DBGET
integrated database retrieval system
