Neodiprion virginianus: 124309027
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Entry
124309027 CDS
T09046
Name
(RefSeq) ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
nvg
Neodiprion virginianus
Pathway
nvg04120
Ubiquitin mediated proteolysis
nvg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124309027
04120 Ubiquitin mediated proteolysis
124309027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nvg04121
]
124309027
Enzymes [BR:
nvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124309027
Ubiquitin system [BR:
nvg04121
]
Ubiquitin ligases (E3)
U-box type E3
124309027
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
124309027
NCBI-ProteinID:
XP_046628202
LinkDB
All DBs
Position
1:complement(34560044..34567264)
Genome browser
AA seq
1109 aa
AA seq
DB search
MSELSQEEMRKRRLARLAGLETSISTNSSNSGTGSISPGTPGPSRSSSGPIMSPPTQQLQ
HPEHPMEVEDSSEKQCNTSGVDVDSGIENMEVEESDRRELAPRSRTTSSSTEVTVDQIHT
VVSRVLCVSWKESTEGAIFLPQTAANALEHELSDVTDIANQALMEVLCMFSRGEDPLKEI
TSDASSDREGSPSSQASPLLSPVVTLPSCPVPTLPLPTAGKSQQPKSLIYLFECYSRVAV
EERNHPKRCSTPPLSEVLATLRAQCVQHASLVLQGLVGICQSVIPSTPSPSLLYPVLSQN
LPRGFLHELVARTHSNPHVFTKIFTPLLQGFFLSMQQASLIGNTHRRPIEALEELIEIRC
GSTGNIRPICQLITHQTQFLPDVLTTAVGRELARTSFLGPFLSVSVFAEDQPKVAEKFFS
GNPATDKSINLTLQQELESTRSSLHKMFHAILANSSSCREATLAYLAALLRHNEKRAQIQ
TEEFALAGDGFMLNLLSVLQMLAVKIKLNTIDTLYPFHPSSYVEIKNDTRLKLNSQEVTE
WLASLESTHKWTEAKFPTQCWFLTLHCHHLALLPALQKYQRRLRALRELQKMLDELQATE
PQWKDAPFAAHNKELMKRWKQQLKRLGRSKSSADAGLIDQVLLRRSLHFYTSVADVLLGL
LTQRPAGSELPTLPLPQHVPPQFTALPEWYVEDIAEFLLFALQFSPTVVANNMDNSLITW
LLVVICTPHCIRNPYLIAKIIEVLFVINPSVQGRTETLHDQVMAHEISKTFLASYLMKFY
TDVETTGSSSEFYDKFSIRYHISLILKSMWESPVHRASIVNESRSGKQFVKFINMLMNDT
TFLLDESLESLKRIHEVQELMSNTVAWAALPQDQQQSRSRQLTADERQARSYLTLAKETV
AMFHYLTVDITEPFLRPELVGRLSAMLNFNLQQLCGPKCKNLKVKKPEKYGWEPRTLLSQ
LADIYLHLDCDNFAAALAGDERSFCKELFNDAAGRMERTAIKTVTEIERFRALAERAAAI
ARDNQARDEDYGDAPEEFRDPLMDTLMEEPVKLPSGIVMDRAVIIRHLLNSATDPFSRQP
LSEDMLTPVLDLKERISAWKQEKKKSANM
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaattaagtcaagaagagatgaggaaaaggcggttagcccgccttgcaggcctg
gaaaccagtatttccactaatagttcaaatagtggaactggatcgatttctcctggcact
ccgggtccctcaagatcgtcttctggtccaataatgtcacctccaacacagcagttacag
catccagaacatcctatggaagttgaagacagcagtgaaaagcagtgcaacacttctggc
gtcgatgtagattctggaattgaaaatatggaagtagaagaatctgatcgcagagaattg
gcaccacgctccaggacaacgagttccagtacagaggtaacagttgaccaaattcacaca
gtggtctcacgcgtcctctgtgtttcatggaaagaatctacggaaggtgcaatatttctt
cctcaaacagcagctaatgccttggagcatgaactctcagatgttactgatattgctaat
caggccctgatggaagtgctctgcatgttctctcgaggcgaagatccactgaaagaaata
acatcggatgcttcttccgatcgagaaggcagtcccagcagccaagcaagccctttgctg
agccctgttgttactctaccttcctgtcctgtacccacactacctctacccactgctggc
aagtctcagcagccaaaaagtcttatttatttatttgaatgctactccagagttgctgta
gaagaacggaatcatcctaagagatgtagcacacctcctctttctgaagtgttagccaca
ctgcgggctcagtgtgtgcaacatgcaagtttagttctacaaggattggttggcatctgc
caaagtgtaataccgtcaacgccatccccgtcacttctctatccagtgctatcgcaaaac
ctacctagaggtttcctgcatgaacttgtggctagaactcactctaatcctcacgtgttc
accaagattttcaccccgttactccaaggcttctttctctctatgcagcaagcaagcctg
attggtaacactcaccgccggccaatcgaggccttggaagaactaattgagatacgctgt
ggatccactggcaatattcgtccaatttgtcagttgataacgcaccaaacccagttttta
cctgacgttttgacgactgcagttggaagagagcttgccagaacatcattcttagggcct
ttcctttccgtctccgtattcgcagaggatcaacccaaggttgcggaaaaatttttcagc
ggaaatcctgcaacagataagtcaataaatttaactctacagcaggagcttgaaagcact
agatcgtcgcttcacaaaatgttccatgcaattcttgcaaatagtagtagctgccgagaa
gctacactggcgtatctagcagctcttcttcgacacaatgaaaaacgtgctcaaattcaa
acagaagaatttgcccttgcaggagatggttttatgctcaatttgttgtcagttctccag
atgcttgctgtcaagattaagctcaacacgatagatacgctgtatccgtttcatccttct
agttatgttgaaataaaaaatgataccagattaaagctcaactcacaggaagtgacagag
tggcttgcgagcttggagtcaacgcacaaatggacagaggcaaagtttccaactcaatgc
tggtttttaactcttcactgtcatcatctggcgcttttgccagctttgcaaaaatatcaa
agaagattgagagctctcagggagctacagaagatgctggatgaactacaggcaactgag
ccgcagtggaaagatgctccttttgcagcgcacaacaaggagttaatgaaacgatggaaa
caacagttgaaacgactcggtagatcaaaatcttccgctgatgctggattgatagaccaa
gttcttttaaggcgatctcttcacttttatacgtctgttgccgacgttctgctcggtctt
cttacccagagacctgctggtagtgaattacctacccttccgcttcctcaacacgttcca
cctcaatttactgccttacctgaatggtatgtcgaagacattgcagaatttttgctcttt
gcacttcaattcagccccacagtagtggccaataacatggataattcgctgattacatgg
ctactagttgtgatatgtacgccacactgtattcgcaatccatacttaattgctaaaatt
attgaagtactctttgtgatcaaccccagtgttcaggggagaacagaaactctacatgac
caagtgatggcacacgagatatcaaagactttcttggcatcttaccttatgaagttttat
acagatgtagaaacaactggttccagctcggaattctatgacaagttttcgatccgttac
catattagtttgatattgaaatccatgtgggagagtcctgttcatagagcttccatcgtc
aacgaaagtagaagtggaaagcaatttgtcaagtttataaatatgctgatgaatgacaca
acgtttttattggacgaaagtttggaatctttaaaacgaattcacgaagtgcaggaactt
atgtccaacactgtagcatgggctgcactacctcaagatcagcaacaatctagatcaaga
caattaacggccgacgaacgtcaggcgagatcttacttgactcttgcaaaggaaactgtt
gccatgttccattacttgactgtagatatcacagaaccatttttacgtcctgaattggtc
ggtagactcagtgccatgttgaactttaatttgcaacagctttgtgggccgaagtgtaaa
aatctaaaagtgaaaaaaccagaaaaatatggatgggaaccaagaacattgttaagtcaa
ttagccgatatatacttgcatctagactgtgataattttgctgctgctctggctggggat
gagcgctcattctgcaaagagctatttaatgatgctgcgggtagaatggaaaggactgca
attaagactgtgactgaaattgagcggtttcgagctctagcagaacgggcagctgctatt
gcaagggataatcaggcacgtgatgaggattatggggatgcacctgaagaatttcgtgat
cctctcatggacacgcttatggaagagcctgtcaaacttccatctggtatcgtcatggac
agagcagtgatcattcgtcacctactcaatagcgctacagatccatttagccgtcagcca
cttagtgaagacatgctgacacctgtcctggacttaaaagaaaggatctctgcatggaaa
caggagaagaaaaagtctgcaaacatgtaa
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integrated database retrieval system
