Neodiprion virginianus: 124309175
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Entry
124309175 CDS
T09046
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
nvg
Neodiprion virginianus
Pathway
nvg03013
Nucleocytoplasmic transport
nvg03015
mRNA surveillance pathway
nvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124309175
09122 Translation
03013 Nucleocytoplasmic transport
124309175
03015 mRNA surveillance pathway
124309175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvg03019
]
124309175
03041 Spliceosome [BR:
nvg03041
]
124309175
03009 Ribosome biogenesis [BR:
nvg03009
]
124309175
03012 Translation factors [BR:
nvg03012
]
124309175
Enzymes [BR:
nvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124309175
Messenger RNA biogenesis [BR:
nvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124309175
mRNA cycle factors
Stress granule specific factors
124309175
Spliceosome [BR:
nvg03041
]
Complex C
Other components
EJC/TREX
124309175
Ribosome biogenesis [BR:
nvg03009
]
Eukaryotic type
90S particles
Helicases
124309175
Translation factors [BR:
nvg03012
]
Eukaryotic type
Initiation factors
eIF-4
124309175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
UvrD-helicase
AAA_30
TniB
Utp25_C
Motif
Other DBs
NCBI-GeneID:
124309175
NCBI-ProteinID:
XP_046628479
LinkDB
All DBs
Position
7:complement(413524..416935)
Genome browser
AA seq
403 aa
AA seq
DB search
MSEVKSRRVAQSEDLSNVEFETSEDVEVIPTFDNMGLRDELLRGIYAYGFEKPSAIQQRS
IKPIMKGRDVIAQAQSGTGKTATFSIAILQSLDTQVRETQVLCLSPTRELATQIQKVILA
LGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIKRRVLRTRAIKMLVLDE
SDEMLNKGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTSKFMTDPIRILVKRDELTL
EGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVCSMH
GDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRS
GRFGRKGVSINFVKTDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagtaaagtcacgccgtgtcgcgcaaagtgaagatttgtcgaacgtggagttt
gaaaccagcgaagatgtcgaggttatcccgacttttgataatatgggactccgtgacgaa
ctactacgagggatttacgcctacggtttcgagaaaccgtcggcaattcaacagcgatct
attaagccaattatgaaagggcgagatgtgatcgcccaagcacagtcaggtactggtaaa
acagccaccttttcaatcgccatattgcagtcgttggatacgcaggtccgtgagacccag
gttctctgtctgtctcccacacgcgagcttgctacacagatccaaaaagtgatattagct
ctgggtgatttcatgaatgtgcaatgccacgcctgtatcggaggtaccaatttaggcgaa
gatatcagaaaattggattacggacaacatgttgtatccggtactccaggtcgagtattt
gacatgataaaacgcagagtattgagaacaagagcgataaaaatgttggttctggatgaa
tcggacgagatgctcaacaagggattcaaagaacagatctacgatgtctatcggtatttg
cccccggctacccaagttgtactagtttccgctacgctaccccacgagatccttgagatg
accagcaagtttatgactgatcctatacgtattcttgttaaacgcgatgaattgaccctg
gaaggtatcaaacaattttttgttgcggttgagcgtgaagaatggaaatttgatactctg
tgcgatctgtacgatacccttacaataacacaagctgttattttctgtaacacaaaacgc
aaggtagactggcttacagaaaagatgcgcgaagcgaacttcaccgtatgttccatgcat
ggagatatgccacaaaaagaaagggacaacataatgaaggaatttagatctggtcaaagc
cgagtattaatcacaacggacgtgtgggctagaggaatagatgtacaacaagtatcattg
gtgataaactatgatctacctaataatcgagaattgtacattcaccgaattggacgttcg
ggacgttttggaaggaaaggtgtatccatcaacttcgtaaaaaccgatgacatcagaatt
ttacgtgatattgagcagtattattccacgcagattgatgagatgcccatgaatgtcgcc
gatttaatctaa
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