Neodiprion virginianus: 124309257
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Entry
124309257 CDS
T09046
Name
(RefSeq) zinc finger protein ubi-d4 A isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
nvg
Neodiprion virginianus
Pathway
nvg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124309257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvg03041
]
124309257
03036 Chromosome and associated proteins [BR:
nvg03036
]
124309257
Spliceosome [BR:
nvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124309257
Chromosome and associated proteins [BR:
nvg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124309257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
PHD_4
PHD_2
Lar_restr_allev
zf_RING_Vps8
TNP-like_RNaseH_C
Motif
Other DBs
NCBI-GeneID:
124309257
NCBI-ProteinID:
XP_046628668
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All DBs
Position
7:23206642..23215510
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AA seq
503 aa
AA seq
DB search
MATVTALPASHHLIQVVNESNLSKIESFLNDTAYREAIENSSNYNTRLCRERRLRMPFLD
SQTGVAQNHSALFMSARERIPGLMHGQVYTYPSKRWRKKRRQYLMHYLHPKRGTRGDIDD
GVEGADGIVAGLNDDSKDSVALKDEHSKDAWYYDEQDMLDMDAFDEPDPDSDYDYEESYS
SKRRRRRPRGGAHHPIRGHPPTVDSPGAKRTKGGGRGRKKANYDNADSDKPFVCDLCGAR
YKTRPGLVYHYGHSHSTSSGDPAKEPSPSPADVESWSAADVNALDQPGGTRRGRQSTASS
SNPTPPPAAPLANAGGAAVPQQQQQPPLAVQSSAAPSSPTVPTPKDDLQSAVPSPGTAVP
SPSSAKPEAGPTTTTSAPSGEKKVGKAAQPSPYCDFCLGDARENKKTGGSEELVSCSDCG
RSGHPTCLQFTANMIVSVRKYRWQCIECKCCSICGTSDNDDQLLFCDDCDRGYHMYCLAP
PLASPPEGSWSCQLCLAEFHRHD
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggtgacagctctcccagcgtcccatcacctaattcaagtagtgaacgagtcg
aatttgagtaaaatcgagagcttcctgaacgacaccgcctacagagaagccatagagaat
tcttccaattataacacaagactatgcagagaacgaagactgcgaatgcccttcctcgac
tcgcaaactggagtcgcccaaaatcactcggctctcttcatgtcggctcgagaacgaatc
ccaggcttgatgcatggtcaggtatatacttacccaagcaaacgatggcggaaaaagcgg
cgacaatatctgatgcactatcttcacccaaaacgaggcacccgaggggatatagatgac
ggagtcgaaggagccgacggaattgttgcgggactaaatgatgacagcaaagattctgtt
gctctcaaagatgaacatagtaaggatgcttggtactatgatgaacaagacatgctggac
atggatgccttcgacgaacccgatccagacagtgactatgactatgaagaaagttatagt
agtaaaagacggagaagaaggccccgaggtggagcccaccatcctatcaggggacatcca
cccaccgtggacagtcctggggccaagagaacaaagggtggaggtcgtgggagaaagaaa
gctaactacgacaatgccgactccgataagcctttcgtttgtgacctgtgcggcgctcgg
tataaaaccagaccaggtctggtataccattacggtcattcccactctacctcctctggc
gatcctgctaaggaaccaagtcccagtcccgcagatgttgaatcgtggagtgcagctgat
gtcaacgctttggaccagccaggtggtacgcgaaggggtcgtcagagcactgcttcgtcg
agcaatccgaccccaccacctgcagcgcctctggctaatgccggaggagcagcagtacct
caacagcaacaacaaccaccattggcagttcaatcgtctgctgcgccatcctcccccact
gtaccgactcccaaggacgacctacagtcggctgttccttctccgggtactgcagttcct
tctccttcttcagcaaagcccgaagcgggtccgacgacgacgacatcggcgccgagcggg
gaaaagaaagtaggaaaagctgcccagccgtctccttactgcgacttctgcttgggcgat
gctagagaaaataaaaaaactggtggttcagaggagctggtatcttgcagcgattgcggc
cgctcaggccatccaacttgtttgcaattcaccgcaaacatgatcgtctctgtacgcaag
tacagatggcagtgtatcgagtgtaaatgctgctccatatgcggtacatcggacaacgat
gatcaactgctgttttgcgatgactgcgaccgcggctatcatatgtattgtttggctcca
cctctcgcatctccaccggagggttcctggtcctgtcaactctgcctagccgaattccat
cggcatgactaa
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