Neodiprion virginianus: 124309262
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Entry
124309262 CDS
T09046
Name
(RefSeq) THO complex subunit 7 homolog isoform X1
KO
K13176
THO complex subunit 7
Organism
nvg
Neodiprion virginianus
Pathway
nvg03013
Nucleocytoplasmic transport
nvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124309262
09122 Translation
03013 Nucleocytoplasmic transport
124309262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvg03019
]
124309262
03041 Spliceosome [BR:
nvg03041
]
124309262
Messenger RNA biogenesis [BR:
nvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
124309262
Spliceosome [BR:
nvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
124309262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
Med8
COMM_domain
Orbi_VP5
CENP-F_leu_zip
FliJ
DUF1664
DUF641
Motif
Other DBs
NCBI-GeneID:
124309262
NCBI-ProteinID:
XP_046628680
LinkDB
All DBs
Position
7:complement(23204572..23206584)
Genome browser
AA seq
205 aa
AA seq
DB search
MSDEEVIRRRLLIDGDGTGDDRRINVLLKSFLKWANTPDPDNTVHERMLSQLAQCEFAQK
KSRLVANMSQEELKNYERMSKDIGIQIEEAKKEIEKTKVELQDAKRVRKNRIEYDVLAKV
ISEQPDRLETDVKLATLRKELGTLKEKSEQLEHKLEMRRKQFHVLISSIHSLQGMLDESD
EEIMDVSLENYEDVDVCMSPKAAAW
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgaggaagttatacgacgtcgtctactcatagatggagatggaacaggcgat
gatagacggataaacgttttgttgaagtcgtttttaaaatgggcaaatactccggatccg
gacaatactgtgcatgaaagaatgctgtcacagctagcccagtgtgaattcgcacaaaaa
aaatctcgtctcgtagcaaatatgagtcaagaggagttaaagaattatgaaaggatgtca
aaggatattggtattcaaattgaagaggctaaaaaagaaattgagaaaactaaggtcgag
ctacaagatgctaaacgtgttcgtaaaaatagaatcgagtatgacgttcttgccaaagtg
atcagcgaacagcctgatagacttgaaacagatgtgaagctcgccactttgcgtaaagag
ttgggaaccttgaaggaaaaatctgaacaattagagcataagctagaaatgcgaagaaaa
cagttccatgtgctaatatcgtcgattcattcgctacaaggaatgttggacgagtctgat
gaagaaataatggacgtcagtcttgagaattacgaggatgtggatgtgtgtatgtctcca
aaggctgcagcctggtaa
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