KEGG   Neodiprion virginianus: 124309332
Entry
124309332         CDS       T09046                                 
Name
(RefSeq) negative elongation factor D
  KO
K15181  negative elongation factor C/D
Organism
nvg  Neodiprion virginianus
Pathway
nvg03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:nvg00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    124309332
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nvg03021]
    124309332
Transcription machinery [BR:nvg03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     124309332
SSDB
Motif
Pfam: TH1 TPR_Vps8
Other DBs
NCBI-GeneID: 124309332
NCBI-ProteinID: XP_046628856
LinkDB
Position
7:complement(4340657..4346085)
AA seq 583 aa
METDYDEDRGGWGDDMGRGGPDDFGGDDGTDNPQDVLKECLDKFKTPDYIMEPGIFTQLK
RYFQAGGNPEQVIELLSQNYTACAQMANLLAEWLILAGVKVTDVQAMVENNLKDMILKTF
DPKKADKIFTEEGETPAWLTEMIQHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQGE
ITSISTAAQQIEVFSRVLKTAIAGFLQNTEDWQSSIQECAKMVCHGQHTYVYSQVLLQIL
AQEPRGGFTMKRLSQEITKCAQQNRHDVTPITMALNGAAGSPSACQALGSMLSRNTLNPA
DITVLFRNYSNPEPPPVELIRNPQFLELLVDALFKPGVKVNPEHKSKYINLLAYAASVCE
TPAKKGTQRKINKDELKTTMQAIEKVHNICNINKGSTELIAELNTLYQCIRFPVVSVGVI
RWVACTVTEPSYFKLSTEHCPIHLALLDEVVACHPLLHPKVLQLLVQLFESKQDELEILV
QLEMKKMLIDRMVNLLSRGCVVPVVCYIKQCWQRSDTDVSLIRYFVTEVLEAIAPPYTPE
FIQLFLPMVEDDEITGTMRGDGDNDLVSEFIVHCKAHSGTAVR
NT seq 1752 nt   +upstreamnt  +downstreamnt
atggagactgattatgatgaggatcgaggaggatggggagacgacatgggtagaggtggc
ccagacgattttggaggtgacgatggaacagataatcctcaagatgttcttaaagaatgt
ttggacaagtttaaaacaccggactacatcatggagcctggtatatttactcagttgaaa
cgatatttccaagcaggtggtaatcccgaacaagttattgaattattgtctcaaaattat
acggcatgtgctcagatggcaaatcttctggccgaatggttaattcttgctggtgtaaaa
gtaacggatgtacaagctatggtagaaaataatctcaaagacatgattcttaaaacgttt
gatccaaaaaaggctgacaaaattttcactgaggagggtgaaactccagcctggttaaca
gagatgatacaacatcctacttggcgttcactaatttatagacttgctgaagaatatcct
gattgcttgatgttaaattttaccataaaacttatatctgatgctggattccaaggagaa
ataacaagcatttcaacggctgcacaacaaatagaagtattctcaagagtattaaaaact
gccattgcaggattccttcaaaataccgaggactggcaatctagcatacaggaatgtgcc
aaaatggtttgtcatgggcaacacacgtatgtgtacagtcaagtattgttacaaatttta
gcacaagaacctcgaggcggttttacaatgaaacgactttcacaagaaattacgaagtgc
gctcaacagaaccgtcacgacgtaactcccataacaatggcattaaacggagcagctggt
agtccaagcgcttgtcaagccttaggttcgatgttatcacgaaatactttgaatccagct
gatataacagtattgtttaggaattactccaacccagaacctcctccggttgaattaatt
cggaatcctcaatttttagaattattggttgatgctctatttaagccaggagtaaaggta
aacccagagcataaatcaaagtatattaacttgctggcatatgcagctagtgtttgcgaa
acaccagccaagaagggaacacaacgaaagatcaacaaagatgaattaaaaaccacgatg
caagccatcgagaaagttcataacatttgtaatattaataaaggttcaactgaactgata
gccgagttgaacacgttgtatcagtgcattagatttccagtggtgagcgttggtgtgatc
agatgggttgcatgtacggtaacagaaccatcgtattttaaattgagcacagaacactgt
cctatacatttggctcttctggacgaggttgtagcctgtcatcctctcttacatccaaaa
gtgcttcaactcttggtgcagttatttgagagcaaacaggatgaactcgaaatacttgtt
cagttggagatgaaaaagatgctgatagaccgaatggtcaatttattgagtcgaggatgt
gttgtccctgttgtatgctatattaagcagtgctggcaacgcagtgacactgacgtttcc
cttattagatattttgtcaccgaggttttagaggctattgcaccaccatacactccggaa
tttatccaactatttttacctatggtggaagacgatgagataacaggcacgatgcgtggc
gatggtgataacgaccttgtttctgagttcatagttcactgcaaggcacacagtggcaca
gctgtgagatga

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