Neodiprion virginianus: 124309632
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Entry
124309632 CDS
T09046
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvg03021
]
124309632
03036 Chromosome and associated proteins [BR:
nvg03036
]
124309632
Transcription machinery [BR:
nvg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
124309632
Chromosome and associated proteins [BR:
nvg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
124309632
SLIK complex
124309632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
HTH_Hrp3
CHD1-like_C
Helicase_C
Chromo
ResIII
HDA2-3
Myb_DNA-binding
DEAD
Motif
Other DBs
NCBI-GeneID:
124309632
NCBI-ProteinID:
XP_046629405
LinkDB
All DBs
Position
7:17980986..17997717
Genome browser
AA seq
1835 aa
AA seq
DB search
MMQKTLDSESGKESGSDSENESKSDSSSSGSNSGSGSGSDSDSSSSSGSGSASGSDSEKS
DKSSKSDTPAQSVSIQSKSSVHSSETKVRHKSDSSREWDENPDVYGIRRSGRSRKEPERL
TTQRESDGDVRRKGQKKSTQNSWNSDSSESESDEATKRRPPPSKSINRRAAQKVKENTRS
RHKRISESSENSSFDSDDNRRQVTRRAGTAVSYKEQSEEGTDSEDIVEVDEALATPLEPD
NAETIERILGQRRGKKGVTGNVTTVYAVEENGDLNPTNLADEEAETQYLIKWKGWSHIHN
TWESEDSLKAQKVKGIKKLENFVKREREIKQWRDYAGPEDIDYFECQLELQQDLLKSYNY
VERIIAEYNKPDSGHPDYYCKWESLPYADATWEDGALIIKKWPEKIKEFRDREDSKRTPS
KHCKVLKYRPKFHQVKGQPEYMGRGKDLVLRDYQMDGLNWLIHSWCKENSVILADEMGLG
KTIQTICFLYYLFHTQQLYGPFLLVVPLSTMTSWQREMAQWAPDMNFVTYLGDVTSRNVI
REFEWCYSSKRLKFNAILTTYEIVLKDKTFLGAINWAALLVDEAHRLKNDDSLLYKALTE
FHTNHRLLITGTPLQNSLKELWALLHFIMPNKFNSWEEFEKEHDNAAQKGYSKLHRQLEP
FILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNYNALRKGVKGSTTTFLNIV
IELKKCCNHAFLTKPTDGERRESNEDYLQQIIRGSGKLVLLDKLLVRLRETGHRVLIFSQ
MVRMLDILGEYLQKRHFPFQRLDGSIKGELRKQALDHFNADGSTDFCFLLSTRAGGLGIN
LATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTKNSVEEEIVERAKQKMVL
DHLVIQRMDTTGRTVLDKKGPNTNNNPFNKEDLNAILKFGAEELFKDEEDGDEEPTCDID
EILRRAETRDEAPATVGDELLSAFKVASFAAFEEETEPIPQLNEIDDESKDWAEIIPENF
RKKLEEAEKSKEMEDLYLPPRSRKTLQQINQSGEEGRGRKRRKTTGDDSEDAEDSGSEAE
GTDDERPKKRGRPRVTPRENMKSFTDAEIRRFVKSYKKFGAPLKRLDDIAADAELQEKPM
SELRYLGEQLRIRCEACLAEFETIAKENKGTEEEGRGPGRKRGRGPTFKVGGVMVNAKSL
SAAEKELEPLDAALPADSEQRANWHLDIKLKPANFDCDWTPDDDSRLLRGIYHHGMGSWE
AIKLDANYKLGDKILPHNDSKPQVKQLNTRAEYLLKVLKKQMDLKLGVTRTRKPRKPKEV
KTVITKEIVEENDSSGDENKKLKLKLDKQPVKKEEEPLCKKEPKEEGEVTSDDKKKDKKL
KKEKKESRRGKKNKQPVGPMHFTANNEPRALDVLGDLDPSIFNECKEKMRPVKKALKALD
RPDQSLSQSEQVTHTRQCLVQIGNQINICLAEYKDPELIKEWRSNLWYFVSKFTEFDAKK
LYKLYKHATKKDETSSNPVSSPEKKEETVNPKKHSEKLHDKHSEKHSEKHVERHTDKWSD
NSQSKDSSSKDSQRQQVKRRIDEVEENSNSSTPNKKHQSITSVTNSTTTGSTTTVTTTTT
TTPIAANTLMANSNSNSSNSLSSEQPSRHKEPKEIKHKEMKRDRDRDRERERSHGERGLD
RLGGAKDERVRRDSGGYNIGGHYSGGREDDHWVPRDGRDPRDSRFGDHKRERFESYGRMP
SGYHRDRDRERDRGMHMNEKRSDYYRYPPGPPGYGYGGPGSYGSGSSGGYPPSDLPPGHF
RGRAYPGDGYPGDWRPNKDYRRDYDRRPPPPNANS
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagaaaactttagattctgagtctggtaaggaatctggttcagattcggagaac
gagagtaagagcgacagctcatcatccggaagcaactccggatctggttctggatcagac
agtgactctagctcctcaagcggttctggttcagcatcaggttcggactctgaaaagtca
gataaatcgtcgaaatcggatactcctgcacaaagcgttagcattcaaagtaaaagctcg
gtacatagctcagagacaaaagttcgacataaaagcgactcgagtcgtgaatgggatgaa
aacccagacgtttatggaatccgaagatcggggagatcccgcaaggaaccagagaggctc
actacgcaacgcgaaagcgatggcgatgtacgacggaagggtcaaaaaaaaagtactcaa
aattcctggaattctgacagttcagaatcagaatcggatgaagctactaaacggagacct
ccgccaagtaaatcgataaatcgtcgagcagcgcaaaaggtgaaagaaaacacccgttca
cgtcataaacgaatatcagaatcctcggagaattcttcgtttgacagcgatgataatcga
aggcaagtcacgcgacgggctggaacggcagtcagttacaaagaacagagcgaagagggg
actgatagtgaggatatagtcgaggttgacgaagcattggcgactccgttggaaccagat
aatgccgaaaccattgaacgaattttggggcagagaagaggaaaaaaaggagttactgga
aatgtgacgactgtctatgctgttgaagaaaacggtgatctgaatcctacaaatttggcg
gacgaagaagccgagacgcagtatctaataaaatggaaaggctggtcgcatatacacaat
acgtgggaatcagaggattctttgaaggcgcaaaaggtgaagggtattaaaaaattagaa
aatttcgtgaagcgagaacgggaaatcaaacagtggagagactatgctggacctgaagat
atagactacttcgaatgtcagctggaacttcaacaggatttattgaaaagctacaattac
gtagaacggataattgctgaatataacaaaccggattctggacatccagattattattgt
aaatgggaaagtttaccatatgccgatgcgacgtgggaagatggagctttgataataaaa
aaatggcctgagaagatcaaggaatttcgcgatagggaagattcgaaaagaacaccgagt
aaacactgtaaagtattaaagtatagaccaaaatttcatcaagtcaaagggcaacccgaa
tacatgggaagggggaaagatttagtcttgagagactatcaaatggacggattaaactgg
ttgattcattcttggtgtaaagagaatagtgtgattctcgcggatgagatgggtctggga
aaaactatacaaactatatgcttcctttactacctttttcacacgcaacagttgtatgga
ccatttttattggttgtaccattatctacgatgacgtcttggcaaagagaaatggcacag
tgggcaccagatatgaattttgtaacttatcttggtgatgtgacgtctaggaacgtgatc
agggagttcgaatggtgttatagttcaaagaggttgaaattcaacgcaattttgacgacg
tacgaaatagttttgaaggataaaacgttcttgggggccataaattgggccgcactgctc
gtcgacgaggcgcatcgtctcaaaaatgatgattcacttttatacaaagcattgacagag
tttcataccaatcatagacttcttatcaccggaactccgttgcaaaacagtttgaaagag
ttgtgggcattgctgcattttataatgcctaacaagttcaactcttgggaagaatttgaa
aaagaacatgacaacgcggcgcaaaagggttactcaaagcttcacaggcaattggaacca
ttcattttgcgtcgagtgaaaaaagatgtagagaaatcattgccggctaaagtcgaacag
atattacgtgtcgagatgacctctttgcaaaaacagtattacaagtggatacttactaaa
aattataatgcccttcgcaagggtgttaagggatcgacgacaacgtttctcaacattgtt
atagagttgaaaaaatgttgcaatcatgcattcctaactaagccaacggacggtgaaagg
cgagaaagcaacgaggattatttacaacagataattcgtggatcgggaaaattggttttg
ttggataaactgttagtacgactccgagaaactggtcacagagttttgatattcagccag
atggtcagaatgttggacatcttgggagaatatctgcaaaaaagacattttccctttcaa
agattagatggaagcataaagggagagctcagaaagcaagcgctggatcatttcaatgca
gatggctcgacagacttctgctttttactgtcaaccagagctggtggtcttggaattaat
ttggcaacagctgatactgttatcatatttgattctgattggaacccgcagaacgatctg
caagcccaggctagagctcatcgtataggtcaaaaaaaccaggtgaacatatacagattg
gtgacaaagaattccgtggaagaagaaatagttgaacgtgcaaaacaaaaaatggtgctc
gaccatttagtaatacagagaatggatacaacgggaagaacggtcttggacaaaaagggt
cccaacacaaataataacccttttaacaaggaggatctaaatgctattctgaagttcggt
gccgaagaattgttcaaagatgaagaagacggggatgaggagcccacttgtgacattgac
gaaatactgcgacgtgctgaaaccagagacgaagccccggccacggtaggagacgaactc
ttatcggcgttcaaagttgccagttttgccgctttcgaagaagagacagagccgattcct
caacttaatgaaattgacgatgaaagtaaagattgggctgagattattcctgaaaatttt
aggaaaaagcttgaggaagcggaaaaatctaaggaaatggaggatctgtatctaccaccc
agaagtcggaagactcttcagcaaatcaatcaatctggtgaagaaggaaggggtagaaaa
cgcagaaaaactacgggcgacgacagcgaagatgctgaagattcgggaagcgaggcagaa
ggcaccgatgatgagaggcctaaaaagcggggtagaccaagagtcactcctagagaaaat
atgaagagttttaccgacgccgagattcgaaggttcgtcaagagctacaagaagtttggg
gctccgctgaaaagattagacgatattgcagccgatgccgaattgcaagagaagcctatg
tctgagttgcgttacttgggcgagcagctaagaatcagatgcgaggcttgcttagcagag
tttgaaactatcgctaaagaaaataaagggactgaagaggaaggccgtggtccagggcgg
aaaagaggaagaggtccaaccttcaaagttggcggcgttatggttaatgcaaaatccctt
tctgctgctgaaaaagaattagaaccgctcgatgccgcactccctgcagattccgaacag
agagccaattggcaccttgatataaaattaaaaccggcgaactttgactgcgattggact
ccagacgatgactcgaggttacttagaggaatttatcatcatggaatgggatcttgggag
gcgattaaattggacgcaaattataaacttggtgacaaaattctccctcacaacgacagt
aaacctcaagttaaacagttgaatacacgagctgagtatttattgaaagtgctcaaaaag
cagatggaccttaaacttggagtgaccagaacgagaaagcctcggaagcctaaggaagta
aaaactgtcattactaaagaaattgtcgaggagaatgacagttcgggagatgaaaataaa
aagctcaagcttaaactggacaagcaaccggttaaaaaggaggaagagcctttgtgcaag
aaagagccgaaagaagaaggcgaggttacgtcggatgataagaaaaaggataaaaaactg
aagaaagagaagaaagagagtagaagagggaagaaaaacaaacaacctgtcggtccaatg
cattttacggccaacaatgagcctagagctcttgatgttcttggtgatcttgatccgtct
atatttaacgagtgcaaggaaaaaatgcggcccgtcaaaaaagctctgaaagctttggat
aggccggatcagtctttaagtcagagtgaacaagtaacgcacaccaggcaatgcctcgtt
caaattgggaatcagataaatatttgtctggccgagtacaaggatcccgaacttataaaa
gagtggagaagtaatctatggtatttcgtgtctaaatttacggaatttgacgcgaaaaaa
ttatacaagttgtataaacatgcgactaagaaggatgagactagctcgaatccagtatcc
agccccgaaaagaaggaagaaactgtcaacccgaagaagcatagtgaaaaactacacgat
aagcacagtgagaagcatagtgagaaacatgttgaaagacatacggataagtggagcgat
aattcacaatccaaagatagtagcagcaaagattcacagagacaacaggtgaaacgtaga
atagacgaagtggaggagaattcaaatagcagtactccaaacaaaaaacatcaatctatt
acctcggttacaaatagtacgacgactggttccacgacgacggtaacaacaaccacaaca
acgacgccaattgctgcgaacactttgatggcaaactcgaattcgaattccagtaattca
ttgagtagcgaacaaccgtccagacacaaggaaccaaaagaaatcaaacataaggaaatg
aaaagagacagagatcgagatagggaaagggaaagatcccacggcgaaagaggtttggat
agattaggcggagcgaaagatgagagagtgaggagagacagcggaggttacaacatcggt
ggtcattacagtggaggacgcgaagatgatcattgggtacccagagacggtagagatcct
cgagacagcaggtttggagatcataaacgagaaagattcgaatcttacggacgtatgcct
agcggttatcatcgcgacagagacagagaacgtgatcgcggcatgcatatgaacgagaaa
cgaagtgattactatagatatcctccaggccctccgggttatggatatggtggtccagga
agttatggaagcggaagcagcggtggttatccaccctcagatctaccgcctggacatttc
agaggacgagcatacccaggggatggatatcctggtgattggaggcccaacaaagactat
agacgtgattacgaccgtaggccacctccgccgaatgcaaattcctag
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integrated database retrieval system
