Neodiprion virginianus: 124310118
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Entry
124310118 CDS
T09046
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
nvg
Neodiprion virginianus
Pathway
nvg04140
Autophagy - animal
nvg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124310118
04148 Efferocytosis
124310118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvg04131
]
124310118
Membrane trafficking [BR:
nvg04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
124310118
Hops complex
124310118
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
PEP5_VPS11_N
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
124310118
NCBI-ProteinID:
XP_046629730
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Position
1:complement(8979972..8985283)
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AA seq
831 aa
AA seq
DB search
MSVMLTADWFPLGRDKYFRKFELYPVSFHQEVSNQNFIAAAPYGGPIAVTRDPNKLVKVQ
GANKPIISIYSSSGKLMAPLQWNSGQLVLLGWSHQEELLCVQDDGMVLIYDMFGTYQHAF
GMGNEAKETKVVAAKFFPTVNGTGVAVLTSTNRIFLVNNVSEPKVRQVAEIPKTGGSIDC
WCIVPTERDSHIVAANQEGIYQIQHMYQKPSPIPFSTYFTNKVNNIIRMAVSGNNRHIAL
YSDTGCLYLGSVDLKKKYCECFTNITDPLSDIAWCGTEAVVCCWNSVLMVVGRTGETIMY
TYDGPVHLITEIDGVRVLSSSSHEMIQKVPNVVQKIFRINSTDSASYLLEASKQFQKRSH
KADSYIDLVKEKLDTAIQDCIEAASYEFDFETQKLLMRAAKFGKGFSRSTNPDVYVTMCR
QLRVLNAVRHHTIGIPLTYTQLQVLSSQVLLHRLVARRHYYLSIQIARHLQLPEVDGESR
ILAHWACYKVKQTQLDKEQIAEEIADKLGYAPGVSYSEIAIEAANCGRKQLAIKLIDYEP
RAQLQVPLLLRLGEERAALYKAVESGNTDLVYTVIFHLRENMPLADFQRFIMRSPLAMAL
YIKYCQGHNRETLRDIYSQDDDFHSQALWFIREGYQQKNSLSRDTFLQSAHENFKLARND
LNAALTEEQIKLLRYQRSLADTLHQPVVGKPLHDTVKLLLLQNEIKLADKLRSEYKLPDK
RYWWLRIQCLAENGLWMELEKFSKSKKSPIGYEPFIEECLKYKKNDEAKKYLPRVREELK
VKYFAKVGMLLEAAQIALEQKDQSALEFVVAQCGPADKHVAEKINAMKASL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttatgttgactgcggattggtttcccctcggaagggacaagtactttaggaaa
ttcgaattgtaccctgtatcatttcaccaggaagtaagtaatcagaattttattgctgct
gcaccgtacggcggtcctattgcagtcacacgagacccgaataaacttgtcaaggtacaa
ggcgcaaacaagccaatcatctctatctactcgtcatctgggaaattgatggcaccgttg
caatggaacagtggtcaacttgttttgcttggctggtcgcatcaagaagaactgctctgt
gtgcaagacgatggaatggttttaatctacgacatgtttggcacttaccagcatgcattc
ggcatgggaaatgaagccaaggaaactaaagtcgtcgcagcaaaattttttccaactgtt
aatggtacaggagtcgctgttctgacatctacaaatcgaattttcttggtgaacaatgtg
tccgagcctaaagttagacaggttgctgaaattccaaaaactggggggtcgattgattgc
tggtgtattgttccgactgaaagagatagccatatagtagccgctaatcaagaaggaatt
tatcagattcaacatatgtaccaaaaaccatctccgattccctttagtacgtatttcact
aacaaagtcaacaatattataaggatggctgtatcgggaaataaccggcacattgctctt
tattcggacactggctgtctgtaccttggttcagtggatctcaagaaaaagtactgcgaa
tgcttcaccaatatcaccgatccgctttctgatatcgcttggtgtggtacagaggcagta
gtttgctgttggaacagtgttctcatggtagtgggaagaacaggggaaacaattatgtac
acatacgacggaccagttcacctcattaccgaaattgacggcgttcgcgttctgtcaagt
tcgtcccatgaaatgatacagaaggttccaaacgttgtgcaaaaaatattccgcataaat
tcaaccgattccgcgtcttacttactcgaggcatctaagcaatttcaaaaaaggtctcac
aaagccgacagttatattgatcttgtcaaagaaaaactcgacacagctattcaagattgt
atcgaagctgccagctatgaatttgacttcgagacacagaagcttcttatgcgggctgct
aaattcggaaaaggtttcagtagaagtactaatcctgatgtttacgtcactatgtgtcgt
cagctaagggttttgaatgctgttcgtcatcacactataggaattccattgacatacaca
caattacaggttctctctagtcaagtattgctccatcggctggttgccaggaggcattat
tatctgagtatacaaatcgctcgtcaccttcaattaccggaagtggatggggagagtaga
atactggctcactgggcatgctacaaggtaaaacaaacgcaacttgacaaagaacagatc
gcagaagaaatagctgataaattaggttatgctccaggtgtttcctacagtgagatagct
atcgaggcagcaaattgtggcagaaaacaattagctataaaacttatcgactatgaacct
agagcgcaattgcaagtacccttgttactgagattaggcgaagaacgtgcagccctttac
aaagctgtagaaagtggaaatacagatttagtttacacagtaatttttcatttacgagag
aacatgccactagctgacttccagagattcatcatgcgttctccactggcaatggcactg
tacataaaatattgtcaaggtcacaacagagaaacattgcgcgatatttatagtcaagac
gatgattttcactctcaagcattatggtttatcagagagggctatcagcaaaagaattct
ttgtcaagagatacgttcttacagtccgctcacgaaaactttaaactagctcgaaatgac
ttgaatgcagcactcacagaggaacaaataaagctcttacgttatcaaaggtccttggca
gatacattgcatcagccagtggtgggaaaacctttacacgatactgtcaagcttctactt
ttacaaaacgaaattaaacttgcggacaagcttcgttcggaatacaaattacctgataaa
cggtattggtggttgagaattcaatgcctagcggaaaatggcttatggatggaattggaa
aaattttcgaaaagtaaaaaatcgcccattggttacgagccgttcatagaggaatgtttg
aaatataaaaaaaatgatgaggcaaaaaaatacttgcctagggtaagagaggagttgaaa
gtaaaatactttgccaaagtaggaatgcttttggaagcggcccagatagcattagaacag
aaggaccaatcagcgttggaatttgtagtggctcaatgtgggcctgcagataaacacgta
gcagaaaaaattaatgccatgaaagccagtctttga
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