Neodiprion virginianus: 124310282
Help
Entry
124310282 CDS
T09046
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
nvg
Neodiprion virginianus
Pathway
nvg04620
Toll-like receptor signaling pathway
nvg04624
Toll and Imd signaling pathway
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
124310282
04624 Toll and Imd signaling pathway
124310282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nvg03000
]
124310282
Transcription factors [BR:
nvg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
124310282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank
Ank_2
RHD_dimer
Ank_4
Ank_3
Ank_5
RRM_9
ANK_LRRK2
DUF5071
Motif
Other DBs
NCBI-GeneID:
124310282
NCBI-ProteinID:
XP_046630053
LinkDB
All DBs
Position
1:complement(1942627..1949753)
Genome browser
AA seq
882 aa
AA seq
DB search
MPQVYENLDVFQNYNQQEDQIYPFPDVMMNNLSLLSPSNSSLDSQMTSSTPSPMSISQSP
NHTMSYYTLSNVTGTMLEDRYIKIIEQPVDKFRFRYKSEMMGTHGSLAGANSSNSRKKQA
PTVELKNYPGSAVIRCTLVTADPDRRGPHAHRLVRRVGNSDEDDPHEQKVSPEQGFTVSF
HGMGIIHTAKKHIKDELVKKKRITALEEAKRKNVNVTSLTIRDEATIKMEAEAAQKWMSL
NSVALCFQAFVPNANGVLCPITEPVYSNPINNLKSALTGELKICRIDKTAGSCDGNEEVF
MLVEKVGKKNIVIKFFEMDENNVEIWSALGHFTELDVHHQYAIVFRTPPYKDKDITEPKE
VFIKLCRPTDGESSDPLQFTYKPNNRIGRKRPRMSCESTELQTPIAINLVQSDEGTSVFN
VNNSSEINKLLSEHCTSNEFREYSENLDLEEYINLLPREVNDNEELRLDGSLKKKETASF
AETIVKQIRIILQKNDPNGKERILALLKERTVYGDSPLHSALRHGQMNLVKYILMLLAKY
PDFKQIVDSQTSSGRTCLHYAVEQNQPAVTKALLLIGADASACDDHGFSPLHKAVKIPEA
GHCVDALLEGGSISVETRDDTGWTALHLAAEAGSLHAVKSLVKAGVDVNSTDMSYGRTAL
HIAVEGGHKEIVEFLLKKTTIDVNKRNFSGNTALHSAVVNTGERAEELCKLLLNHGANPS
IPNNNRDSSKELQATTIKDEAISDDEDAQESGQTSFDLASNKPEILQLLSATNTIIKQEI
EDVPEESDGTLLDEKAMTLLVPILDESKAWEKIVTSLGYDFLQSSLKTSGPVSPSRMLLN
YLDIQAEVSIEKLRTLLVELNETKAVDIIDEMILRRNTSSTK
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaagtttacgaaaacttggacgtcttccagaactataatcaacaggaggatcag
atttatccgtttcctgatgttatgatgaataatctcagcctgttgagtccgagcaacagc
tcactggattcacaaatgaccagcagcactccgtcaccgatgtcgatatcacaatcgcca
aaccacacaatgtcatactatacactgagtaatgtaactggcacgatgttggaagatcgg
tatataaaaattattgaacaaccagtagacaagtttcggttccgatacaaatcagagatg
atgggaacccacgggagtcttgctggcgccaacagctcaaatagccgcaagaagcaagca
cctactgttgagctgaaaaattatccaggcagcgccgtcattcgctgtacgcttgtaaca
gcagatccagatcgtaggggaccacatgctcatcgtctggtacgccgtgttggaaattca
gacgaagatgatccgcacgagcaaaaggtttcacccgaacaaggttttacagtctcgttc
cacggaatggggatcatccacactgctaaaaagcacataaaagatgagcttgttaaaaag
aaaagaattacggctttagaagaagcaaaacgcaaaaatgttaatgtcacatcgttgacc
atccgcgatgaagcaacgattaaaatggaagcagaagctgctcaaaaatggatgagtctg
aacagtgtcgcattatgctttcaagcatttgtcccaaatgccaatggcgtactttgtccc
atcacagaaccagtgtattcgaacccgattaataatctcaaaagtgcccttacgggagag
ctcaagatatgtagaatcgacaaaactgcaggatcttgtgatggtaacgaggaagttttc
atgctggtagaaaaagtgggaaaaaaaaacatcgtaatcaaattctttgaaatggatgaa
aacaatgtagaaatttggagcgctttaggccacttcacagagttagatgttcatcatcaa
tacgcgatagtgtttcgaacgccaccgtataaagacaaagatataactgaaccaaaagag
gtttttataaagttatgcagaccgactgacggagagtctagcgatccattacagttcact
tataaacccaataaccgcatcggtagaaagagaccacgcatgtcttgcgaaagtactgaa
ttacaaactcctattgcaatcaatctcgtgcaatcggatgaaggcacatccgttttcaac
gtaaataattcaagtgaaatcaacaaattgttgagtgagcattgtacatcaaacgagttt
cgggaatactctgaaaatctggacttagaagagtacatcaatttactgccaagggaagta
aatgataatgaagaactgagattggatgggtctttgaaaaaaaaagaaacggcttcgttt
gcggagactattgtaaaacaaattcgaattatacttcagaaaaatgatccaaatggaaag
gaacgcatactagcgttgctcaaagagcgcacagtctatggagattctcctctccattcc
gcgctaagacacggacaaatgaatttggttaaatatattctaatgttacttgcaaagtac
ccggatttcaagcaaattgtcgactctcaaacaagttctggccgtacatgcttacattac
gccgtagaacaaaaccaacctgcagtaacaaaggctctgctcttgattggggcggatgca
agcgcgtgcgatgatcacggtttttcaccgcttcacaaggcggtcaaaatcccagaggcg
ggtcactgtgtggacgcactattagaaggaggaagtataagcgtcgaaacacgagatgat
actggctggaccgctcttcatctggctgctgaagccggatcgctacacgctgtcaagtct
cttgtcaaagctggcgttgatgttaacagtaccgatatgtcttacgggcgtacagcactc
cacatcgccgtcgaaggtggccacaaagaaatcgttgaattcctgttaaaaaagacgaca
atcgacgtaaataagcggaatttcagtggaaacaccgcgctgcacagtgctgtcgtcaac
accggcgaacgagctgaggagctctgcaagcttctgttgaatcacggggcgaatccctcg
atacctaataataatcgcgattcgtcgaaagagttgcaagcaacaactataaaagatgaa
gcgatatccgatgacgaagatgcccaggaaagtggtcaaacgtcgtttgacctcgcatca
aacaaacctgagattttacaattgctttctgcgactaatacgataataaaacaagaaatc
gaggacgtacccgaggaaagtgacggtactttgctggacgaaaaagctatgactcttcta
gttcccatactcgacgaatcgaaggcatgggaaaaaatcgtcacatctttgggatatgat
tttctgcagtcttcgctcaaaacttcaggccccgtcagtccatcgcggatgttattaaac
tacttagacatacaagctgaagtttcgattgaaaaattacgaacgttattggttgaatta
aatgaaactaaagctgttgatataatcgatgagatgattttgcgacggaatacatcaagt
acaaaatga
DBGET
integrated database retrieval system
