Neodiprion virginianus: 124310351
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Entry
124310351 CDS
T09046
Name
(RefSeq) WD repeat-containing protein 36
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
nvg
Neodiprion virginianus
Pathway
nvg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124310351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nvg03009
]
124310351
Ribosome biogenesis [BR:
nvg03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124310351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
Beta-prop_TEP1_C
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EIPR1
PEP5_VPS11_N
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_RIG_2nd
Ge1_WD40
eIF2A
VPS11_N
Beta-prop_WDR35_TULP_N
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
124310351
NCBI-ProteinID:
XP_046630149
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Position
1:complement(4699301..4702578)
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AA seq
891 aa
AA seq
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MSHSKIFSGNRALGYVSNHIPVVTRYIQRRKENLIVTCVGKAFHTYGCSHFTLLSVSGVH
DGEITCMTADAYQIYTASDNKIYAWRRGSELKHTYKGHECPIHILYPFGPHLISIDEDSN
LKLWDIRSEENVLELNFANSIFQITTIVHPSTYINKILLGSEQGQLQIWNLKSAKMIYTF
KGWSSPVSVLEQAPAVDVIAIGLANGKIVLHNIKYDESIVEFIQDWGLVTSIAFRSDGHP
IMATGSLAGHVVFWNLEQRKVDCQLLNAHFGAVTGLNSLPNEPLIVTSSPDNSLKLWIFD
LADGGARLLRIREGHAEPPTFIRFHGSNGHNILSAGGDSSLRIFSTITETYNKSLGRASF
NRKASKKKSRAVEDPLIMPPITLFTSESAREKDWDNVAALHLGLGVVTTWSYDKIKMGEL
KLLPDRFKHNPSATATSLCITHCGNFVIIGYSTGHVDRFNIQSGIHRATYGGENGGHTAP
VSGVAVDTLNQFVITAGRDATIKFWSFKQTKDSSPRTVIEVKEPVEWLRTHAETSLIALA
LEDLSIILIDLDTRRLVRHFNGHTSRITDATFSPDARWLITASMDCTIRTWDIPSAQLID
IFSVEEACTSLHFSPTGEYLATSHVCNLGIYLWSNRTLYSHVSLTSIPSDLSGPVLALPG
SAPEPNQLSVDSEDRDGGENVEFVSPEQIHSKLITMSSLANSRWQNLLNIDIVKKRNKPK
EAPKAPPAAPFFLPTIPSLEVQFDLGEATDKDQASKLLAPTNFDSLTVFGKLLQLSSETD
DFSEVIERFKSLGPSAIDFEIQSLALHSGGSIVIMLQFLKMIRSMMKSKKDFELAQAYLG
AFLKSHGETIAADQQLREYLPKVQKAQLASWTTLRNNLFYNLSVVQHLKRV
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacagtaaaatattttcgggaaaccgtgcgttaggctacgttagtaaccacatt
cctgtagtcacaaggtacattcaaagaagaaaagaaaatttaatagtaacatgcgttgga
aaagcatttcacacttacggatgttcccatttcacacttttgagtgtgtcaggtgtacat
gacggagaaataacttgcatgacggcggatgcctaccaaatttacacagcgagtgataat
aagatatacgcatggcgtcgtggctcagaacttaagcacacgtacaaaggacatgaatgt
cctattcatatattgtacccgttcggaccccaccttatatcgattgacgaggacagtaac
ctgaagctgtgggatatcagatcggaagaaaatgtgctggaactgaattttgcgaatagc
atttttcagatcacaacaattgtacatccgagcacgtacataaataaaatattacttggt
agtgaacagggacagcttcagatatggaatttgaagagtgcgaaaatgatttacactttc
aagggttggagctcaccagttagtgtcttggaacaagccccggcagttgatgtgatagcc
atcggcttggcaaatgggaaaattgttctgcacaacataaagtatgatgaatctattgtg
gaatttatccaggattgggggctggtaacttccattgcctttagaagcgacggacatccc
attatggctacgggaagtctggcaggtcacgtggtattctggaatctggaacaaagaaag
gtagattgtcaattattgaatgctcattttggggcagtaactggtttaaacagcctacca
aatgagcctttaatcgtcacctcatcgccggataattctcttaaactgtggatatttgac
ctggctgatggaggagcaaggcttttgagaattcgcgagggccatgcagaaccaccaact
ttcattagattccacggcagtaatgggcataacatcctgagcgccggaggcgattcctcg
ctcagaatattttctacaataacagaaacgtataataaaagccttggaagagcatcattc
aacaggaaagcgtctaagaaaaaaagcagagctgtagaagatcctctgatcatgcctcca
atcacacttttcacttcggaatcggcgagggaaaaggattgggataacgtagctgcgttg
cacctcggtcttggtgttgttactacgtggtcttacgacaaaataaaaatgggagagctt
aagttattgccggatagatttaagcataatccaagtgccacagctaccagcctttgcatt
acacattgtggtaatttcgtcataattgggtacagcactggccatgtagacagatttaac
atacaatcaggaatacatagagccacatatggtggtgaaaatggagggcatacagctcca
gtcagcggtgttgccgttgatacgttgaatcaatttgtaatcacagctggacgtgatgct
acaatcaaattttggtcgtttaaacaaactaaagattcttcgccacgcactgtgattgaa
gtaaaggagccagtggaatggcttcgaactcatgcagagacgtcacttattgctttagca
cttgaggatctgagtatcatacttatagatttagatactcgacgtttggttcgacatttt
aacggtcacactagccgcatcacagatgcaacatttagtcctgatgcgcgatggttgata
actgcttctatggactgtacaattcggacttgggatattccctctgctcagctcatagac
atttttagtgttgaagaagcttgcacatctttacacttttccccaaccggcgaatacctt
gctacatcacacgtttgtaatctcggaatttacttgtggtctaaccgaaccctctactct
catgtatcgttaacatcaataccatcagatctaagtgggccagtattggcactaccaggt
tctgctccagaaccgaaccagttgtctgtagattctgaagatcgagatggtggtgaaaat
gtcgaatttgtctcaccggaacaaatccactccaagctaatcacgatgtcatctttagct
aactcaagatggcaaaatttactaaacatagacattgtgaaaaaaagaaacaagccgaaa
gaggctccaaaagctccaccagctgctccttttttcctacctacaatcccgtcactagaa
gtacagtttgatttaggagaagcaaccgacaaagatcaagcaagcaaattattagcaccg
acgaattttgatagtcttacagtatttggcaaattgttacaactttctagtgagacggat
gacttttctgaagttatcgaaaggttcaaatctcttggacccagcgccattgattttgaa
atacaatctttggcgttacactccggaggatcgattgtaataatgttacaatttttaaaa
atgatacgctcaatgatgaaaagtaaaaaagatttcgaactcgctcaagcatatcttgga
gcatttttgaagtcacacggtgaaacgatagctgcagaccaacagttgcgcgagtatttg
ccaaaagtacaaaaagcgcaattagcgagttggacaaccttaaggaataacttattctat
aatctcagtgttgtgcagcatttgaaaagagtgtaa
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