Neodiprion virginianus: 124310354
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Entry
124310354 CDS
T09046
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
nvg
Neodiprion virginianus
Pathway
nvg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124310354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvg03019
]
124310354
Messenger RNA biogenesis [BR:
nvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124310354
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Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
DUF5453
Motif
Other DBs
NCBI-GeneID:
124310354
NCBI-ProteinID:
XP_046630151
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Position
1:4696715..4699311
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AA seq
579 aa
AA seq
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MTSELSTSAKCKEHLIWRMFMAIVTSVCVQFIFMTFVILIVNFRIMHPLTWIINTWNAVT
CFRTWSYFLILATVIFLQGVICSKDYLTAPVYRKSRFSIVCNMFKPHNLLVGGLHILVGG
VLVWLHLSLQDERLGLLTVNCDGEETCLVEENFFLLLGGFWIGFYFFVKSNFHTTHLQFP
IVPRSKFSQIKGGIGYLLPHAAMNALSPVLCFIFFYYIDGGYCRETVLSIFSIKMKDVPL
DTLYGLLNISLFFYTWLFTTLFLLTTYTMHLSFEAHLTQRMVFDIEQQSLFADQSSGMCL
ADALATDQVPIIQHLAYYDLVTLAQKEKPRRSILFTLSTPGGRPCNWNSIAVKCMGLLNS
FTLEVNQACATNHKLLSGPTNTSTPGKLSETSYPYKMRNLTAARLLAPNLDSTIPPLPKQ
NSNGDLFITQFLRSKRQEFITYLLSVPMIRYVFEETLEEKIRYIFRNAQPVIWAAEGISS
LIVISLKEDQYGVIQQDLPTIIRTLLSLKEALDKLHKANIFVKKSQSDDKEIRQMMMCLI
STIKRSIYRITTTFKDYIEDLPLEPDIIGQLQSFLSYRE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgacttcggaactttcgaccagcgctaaatgcaaggaacatttaatatggagaatgttt
atggccatagtgaccagcgtctgtgtacaatttatatttatgacctttgtcatactgata
gtaaatttccgaataatgcatccgctgacatggatcataaatacgtggaatgcagtaacg
tgcttccggacttggagttacttccttattttagccacggtgatattcctgcagggtgtg
atatgcagtaaggattacttaacagctcccgtctatcgaaaaagcagattctcgatcgtc
tgtaacatgttcaaaccacacaatttgcttgttggaggattgcacatattagtcggtggc
gtgctagtctggcttcatttatccctgcaggatgaacgccttggtttgctgaccgttaat
tgcgacggagaagaaacatgcctcgttgaagaaaactttttcctactgctcggcggcttt
tggatcggcttttacttctttgtcaaatcaaattttcatacgacacatctacagttcccc
attgtgccccgatcgaagttctctcaaatcaaaggtggaattggataccttctaccacac
gctgcaatgaacgccttgtcacctgttctatgcttcatattcttttactatatcgatgga
ggatactgcagagaaactgtgctttctattttctctataaaaatgaaggatgtaccgcta
gacacactttacggactgctaaacatatctctgttcttttatacctggctattcaccact
ctcttcctcctaacaacatacacgatgcatttgtcattcgaagctcatctgacacaaagg
atggtttttgacattgaacagcaaagcttatttgccgatcaatcctctggtatgtgtctt
gcggacgcattggccaccgaccaagtacctatcatacaacatttggcctactacgacttg
gttacgctggcgcagaaagagaagccacgcagatcgatattattcactctcagtactcca
ggcggtcgtccatgcaactggaatagtatagctgtaaaatgcatggggctgttgaacagt
tttactctagaagtcaaccaagcatgtgctacaaatcacaagctgttatctgggccaact
aatacatcaacacctggaaagttgtccgaaacgtcttacccttacaaaatgagaaatttg
actgctgctagactccttgcgccaaatttggactctacgatccctcctctgcctaaacaa
aactctaacggagatctgttcatcactcagtttcttaggagtaaacgacaggaattcata
acatacctattatcagtgcccatgatcagatacgtatttgaagagactttggaagaaaag
atacgttatatattcaggaatgctcaaccggttatatgggctgcggaaggtatttcttca
ttgattgtgatttcccttaaagaggatcagtatggggtaatacaacaagacttgccaacg
atcatcagaactttgttatcactaaaggaagctttggataaattacacaaggctaatata
tttgtgaaaaaatcacagagtgacgacaaagagataaggcaaatgatgatgtgcttaata
agtacgattaagcgcagtatttatagaattaccaccacatttaaagactatattgaggac
ttgccgctagaaccagatattataggacagctgcagagctttctatcttatagagagtaa
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