Nasonia vitripennis (jewel wasp): 100113818
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Entry
100113818 CDS
T01081
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
nvi
Nasonia vitripennis (jewel wasp)
Pathway
nvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100113818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvi03041
]
100113818
Spliceosome [BR:
nvi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
100113818
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
PRP4
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WD40_like
Beta-prop_HPS5
WD_LRWD1
Beta-prop_Nup120_160
Beta-prop_SPT8
Ig_NUP210_9th
Motif
Other DBs
NCBI-GeneID:
100113818
NCBI-ProteinID:
XP_001605877
NASONIABASE:
NV10674
UniProt:
A0A7M7LJN5
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Position
5:26760706..26763051
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AA seq
515 aa
AA seq
DB search
MSDDEEVQYTRRPRTVHYGSLEESERNRINSGINNDSNNDDSSMPSALIGNVHTSNEYME
LEDDMSKDRQALLEEFERRNKARKINVSTDDSEVKKNLRHLGEPICLFGEGPADRRNRLK
ELLASLGEDAIKKKEEDDKSAQPEKDPETTWYHEGPDSLRIARLWNTAYSLKRAKRRLEA
ARKELETPGATRTAKRQELLKKVQALTIHHSQVGDNRPLSYCQFSPNSKILATASWSGLC
YLWSVPDCKLLRTLKGHSCNVGCIVFHPKATITEDIFEERVSNTCILASCASDGSVKLWG
GGKGENTLAEVEGHTERVSRLAFHPSGRFLGTCCYDSSWRLWDLEQQAEVLHQEGHTRPV
HCISFQVDGSVVATGGQDSFGRVWDLRTGRCVMFMEGHLKSIFGIDFSPNGYHIATGSED
NSCRIWDLRKRSCIYTIPAHMNLIADVRYQKEEGQYLVTASYDGTAKIWSSNAWQPLKTL
PGHDGKVMSVDVSSDNKFIATSSYDRTFKLWAPDS
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgatgaggaagtgcagtacacaaggaggccaagaaccgtacactatggctct
ttggaagagtctgaaagaaataggatcaactctggcatcaataatgattctaataatgat
gacagtagtatgccgagtgctctcattggaaacgtacatacttccaatgagtacatggag
ttggaggatgacatgagcaaagataggcaggccctacttgaagaatttgaacggaggaat
aaagcaaggaaaatcaatgtctccactgatgactctgaagtcaaaaagaatttgagacat
ttgggagagccaatttgtttgtttggtgaaggaccagcagacagaagaaaccgattgaaa
gaattgttagctagtttaggtgaggatgctataaaaaagaaagaagaggatgacaaatct
gcacagccagaaaaagatccagagactacctggtatcacgaagggccggactcacttagg
atagctcgcttgtggaatacagcatattcacttaaacgagcaaagcgaaggctggaagca
gccagaaaagaattggagacacctggtgctaccagaactgccaaaaggcaggagttattg
aaaaaagtgcaagcactgacaatacatcattcacaagttggagataacagacctttatct
tattgtcaatttagccctaattctaaaatacttgccacagcctcgtggtctggtttgtgt
tatctctggtcagtaccagactgcaaattactaagaacactgaagggccattcgtgtaat
gttgggtgcatagtttttcaccctaaggcaacgatcacagaagatatttttgaagagagg
gtttcaaatacttgcatattagctagctgtgcaagtgatggatcagttaagttgtggggt
ggtggcaaaggggagaatacattggcagaagttgaaggtcacactgagagggtttcgaga
ctcgctttccatccatctggtagattcttgggtacctgttgttacgattcctcgtggcgt
ttgtgggatttggagcagcaagctgaagtcttgcatcaggagggtcacaccagacctgtt
cattgcatcagttttcaggttgatggatcagtcgtggcaaccggtggtcaggactccttc
ggccgtgtatgggacctccgtaccggtaggtgtgtcatgtttatggaaggccacctcaaa
tcgatattcggcatcgatttctctccgaacggatatcacatagcaacgggttcggaagat
aattcttgtagaatttgggacttgagaaagcgatcgtgcatctacacgattcctgctcac
atgaatcttattgccgacgtcagatatcagaaggaggagggccagtacctggtgacagcg
tcgtacgacggcactgccaagatatggtctagtaacgcgtggcagccgctcaagacttta
cccggtcacgatggcaaagtcatgtccgttgacgtgtcctcggataataagttcattgcc
acgagttcctatgaccgaacgtttaaactgtgggcgccggactcgtag
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