Nasonia vitripennis (jewel wasp): 100115022
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Entry
100115022 CDS
T01081
Name
(RefSeq) helicase SKI2W
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
nvi
Nasonia vitripennis (jewel wasp)
Pathway
nvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100115022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvi03019
]
100115022
Enzymes [BR:
nvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100115022
Messenger RNA biogenesis [BR:
nvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100115022
mRNA degradation factors
3'-5' decay
Ski complex
100115022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
Ski2_N
DEAD
DEXQc_Suv3
Helicase_C
ResIII
MTR4-like_stalk
ATPase_2
Motif
Other DBs
NCBI-GeneID:
100115022
NCBI-ProteinID:
XP_031780626
NASONIABASE:
NV18659
UniProt:
A0A7M7T7Q7
LinkDB
All DBs
Position
2:complement(35318228..35323465)
Genome browser
AA seq
1277 aa
AA seq
DB search
MTMDSSNEEKDYLELPFGPPPILPDIRTELKEYIVNPEKLAIHQVDKVQQYWERKPKILS
LLEANLTPLGTTLKYERDPITGHIGEIQEVLMQNIGETVRNSMSMARAPGPISEGVKGNA
SNFLFWPGGFDEPQKTSKRETIQVDFENNLKTLAKGFSAGIEFMPDNCTPKNAQDSSCHS
VIESSHKKQVNVNLESVVDKEGHSLAFWFTGEKNEEKKNEENKDGNVGKVDVQTTNMDEF
IEPFKESKVPVFKISEAPKYNMKTKWAEQIDIMIPVNDFDKKIPDPAMTFPYELDTFQKQ
AILKLEEQCDVFVAAHTSAGKTTIAEYAIAMSQKHMTRTIYTSPIKALSNQKFREFKEKF
ENVGLITGDLQIEPTATCLIMTTEILQSMLYCAAEVIRDVEYVIFDEVHYINNEDRGHVW
EQVIILLPPTVNIVMLSATVPNPLEFAHWVGQIKRRKMYVISTVKRPVPLQHYLYTGCDK
KSKDQLFLLVDKDGKFIRSSIKEAIAIKKEQSANQKKSQQTKYQHQREQAKQKPSLTMSP
SVLKNLSAAETLDSVAAAKEEEDKLEDQVRQQMITAKDKRMWVAFLDHLQSTDKLPVVIF
ILSRNRCDKTANAFSESLLNHAEQRYVGEFFDKSIRHLKGTDSQLPQVRKMQRLLKLGIG
VHHSGILPILKEIVEMLFQKGIVKVLFATETFAMGVNMPAKTVVFDSWEKYDGNSSRNLL
PTEYIQMAGRAGRRGHDETGTVIILCKKKVPEEKDLRDMVLGAPQNLESKFKVTYSMILH
LKRLSETISVGDMMRRSFKEVKTWSSQKKNKNELEKILQEIEQAPPLAEHQKEMEQFYDL
AKTYVTLWKELRPSMLEGKKAVKSLVEGRVLCISYRNHYNKLGILLGFRKKSPPEILYQV
FILTSYQEEEEAKSSDKTETYHDLIGLTCKKLYHPSENPTHDILIVPGWSIMEVTNCIIN
VNCKMILADWDKRQIPRFKDAAPGPSCVAAMNELSTLSLAVQDDLSVIQPFLELKIQCME
IKDLHLQNKEALLHHIYQMLKPIQDKLEGTTNLDQEFYQVFKYKELEQKKHELLKRLGDE
YLGNYPEYESRLAVLKELDYIDREDRVTLKGRVALEMGTCEIFLTELVLDNVLTNWQPEE
IAAMLSSLVFQHKSNDEEKDDDIPKLNELKKEMTQVYEKLAKIEMKHYLDPIAQPSFQLI
RVVYEWARQMSFANIMKLTDIQEGIIVRCIQQLNETLQDVRNAAIIIGHPALKEKMEEAS
TKIKRDIVFTASLYTQD
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgacaatggacagctccaatgaggagaaagattatctggagctgcctttcggccctcca
ccgatactaccagatatcagaacagagctaaaagagtacattgtgaatccggaaaaactt
gcgattcatcaggttgacaaggtgcaacagtactgggagaggaaaccaaaaatattgtca
cttttagaggccaatttaactccccttggaaccactcttaaatatgaaagagatcccatc
actggtcatatcggggaaatccaggaggtgttgatgcaaaacattggagagactgtacga
aactctatgtcaatggctagagcacctggacccatttccgagggtgtaaaaggtaatgct
agtaattttttgttctggcctggtggatttgacgagccacaaaagacatctaaaagagaa
acgatccaagtggattttgaaaataatttaaaaacactggcaaaaggtttcagtgcaggt
attgagtttatgcctgataattgcacccccaaaaatgcacaagattcgagttgccactca
gtcatagaatcatcgcacaagaaacaagtcaatgttaatcttgagtcagttgttgataaa
gaaggacactctctggctttctggtttactggggaaaaaaatgaggagaagaagaatgaa
gaaaataaggatggcaatgtagggaaggttgatgtgcaaacaactaatatggatgagttt
attgagccatttaaagagagtaaagtaccggttttcaaaatatcggaggctccaaaatat
aacatgaagaccaaatgggccgaacagatagacatcatgattcctgttaatgattttgac
aagaaaataccagatccagccatgacattcccttatgaacttgataccttccagaagcaa
gctattctcaagctagaagaacagtgtgatgttttcgttgcagctcatacttctgctgga
aaaaccacaattgccgaatatgcaatagctatgagtcaaaaacacatgacaagaactatt
tacacatccccaataaaagcactttctaatcaaaagtttagggagtttaaagaaaaattt
gagaatgttggtctcatcacaggagatttgcaaattgagccaacagcaacgtgccttatc
atgaccacagagattctccagtcaatgttatactgtgctgctgaagttataagagatgta
gaatatgttatatttgatgaagtacattacatcaacaatgaagaccgaggtcatgtatgg
gagcaagttattattcttctgcctccaactgtaaatatagtaatgttatcagctacagtt
ccaaatccacttgagtttgcccactgggttggtcaaataaagagaagaaaaatgtatgta
atcagtacagtaaaaagacctgtacccttgcagcattacctctatactggatgtgataaa
aaaagtaaagatcaactattcctcctggttgataaagatggcaaattcataagaagcagt
ataaaagaagctatagctatcaagaaagagcaatcagcaaaccaaaaaaaaagccagcaa
acgaaataccaacatcagcgggagcaagccaaacaaaaaccatctttaactatgagccct
tcagtattgaaaaatttaagtgctgccgaaactttggattcggttgctgcagcaaaagaa
gaggaagataagttggaagatcaagtgaggcagcaaatgattacagcgaaagataaaagg
atgtgggtagcctttttggaccatctccaaagcacggataaattgccagtcgttattttt
atcttgtcgagaaacaggtgtgacaaaaccgctaatgctttctcagaaagtttgctcaac
catgcagagcaaaggtatgtgggagaattcttcgacaagtccatcagacatttgaagggt
acagattcgcaattaccgcaggtccgcaaaatgcagagattattgaaattgggaattgga
gttcatcacagtggcattttgcctattttgaaagaaatagttgagatgcttttccagaag
ggcatagtcaaggtattatttgcaacggaaacctttgccatgggcgtaaacatgcctgcc
aagaccgtcgtcttcgattcatgggaaaagtacgacggcaactcctccaggaatcttctg
cccaccgagtatattcaaatggctggtcgcgctgggcgccggggtcacgatgaaacgggt
actgtgataattctctgcaagaagaaggtaccagaagaaaaagatctcagagacatggtt
ctcggcgctccgcagaacttggaatcaaaattcaaagttacctactcgatgatattacac
ttgaaacgtctcagcgaaacgatttcagttggagacatgatgcgtagatcgttcaaggag
gtaaagacttggtccagtcaaaagaagaataaaaacgagctggagaagatattgcaggaa
atcgaacaagctccccctctggcagagcatcaaaaagaaatggagcagttctatgacttg
gccaagacctatgtgactttgtggaaagaattacgaccatctatgctggaagggaagaaa
gctgtcaaatctttggtagaaggaagagttctttgtatatcttatcgtaaccactataac
aaattgggtatcttgttgggtttccggaaaaaatcgccgccagagattctttaccaagta
ttcatcctgacaagttaccaagaagaagaagaggcaaaatccagtgacaagacggagacg
tatcatgaccttattggtctaacttgtaaaaaattatatcatccaagtgaaaatcctacc
cacgatatcttaattgtaccaggatggtcaatcatggaagtgacaaactgtataatcaat
gtcaattgcaaaatgattttagctgattgggataagagacagatacccagattcaaagac
gcagcacccggaccctcttgtgtagcagcaatgaatgaactctctacgctttcattagca
gtacaagatgatctatccgtgatacaaccgtttttagaactcaaaatccagtgcatggaa
ataaaagatctacatttgcagaataaggaggcattgttgcatcacatttatcaaatgctg
aaaccaattcaagataaactagaaggtacgaccaacttggatcaagaattttatcaagtc
tttaaatacaaggaactggagcagaaaaagcacgagttgctcaaaagacttggtgatgaa
tatttgggaaactatcccgagtatgaaagccgacttgcagttctgaaagaactggattat
atcgatcgtgaggatagagttacgttaaaaggtcgagtagctcttgaaatgggaacttgc
gagatctttttgaccgagttggtgttggacaacgttctcacgaactggcaacctgaagaa
attgctgcaatgctgtcttctctggttttccaacataaaagtaatgatgaggaaaaagat
gatgatatccctaagttgaatgagttgaaaaaagaaatgacacaagtttacgaaaaattg
gccaaaatcgaaatgaaacactatttagatccaatagcacaaccaagtttccagttgatt
cgtgtagtatacgaatgggctcgtcaaatgtcatttgccaacataatgaaacttaccgac
attcaagaaggaataatcgtaagatgcattcaacaactaaacgaaacgctacaggacgtt
agaaatgcggctattatcattggacatccagctctgaaagagaaaatggaagaagcttcc
acgaaaatcaagagagatatcgtttttacagcttcgctgtatacacaagattga
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