Nasonia vitripennis (jewel wasp): 100115330
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Entry
100115330 CDS
T01081
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
nvi
Nasonia vitripennis (jewel wasp)
Pathway
nvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nvi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100115330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvi03019
]
100115330
Messenger RNA biogenesis [BR:
nvi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100115330
U7-dependent histone pre-mRNA processing factors
100115330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
100115330
NCBI-ProteinID:
XP_031780193
NASONIABASE:
NV15232
UniProt:
A0A7M7QRD0
LinkDB
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Position
2:34921360..34926215
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AA seq
738 aa
AA seq
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MTSIIKLHAISGALDESPPCYILQVDELRILLDCGWDEKFDPDFIKELKRHVHQIDAVLL
SYPDPLHLGALPYLVGKCGLSCPIYATIPVYKMGQMFMYDIYQSRHNMEDFNLFTLDDVD
AAFDKIVQLKYNQSISMKGKGYGVTLTPLPAGHMIGGTIWKIVKVGEEDIIYAVDFNHKK
ERHLNGCELERLQRPSLLITDSFNATYQQARRRTRDEKLMTNILQTLRGGGNVLVGVDTA
GRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMKSFEGARN
NPFQFKHLQLCHSMAELNQVPSPKVVLASTPDMECGFSRDLFLQWCSNPQNSIIITSRTS
PGTLARDLVENGGNRNITLEIKKKVRLEGAELEEYMKKEKVKQEQLKQEKMETADVSSES
EDEIEVGGAKGKHDLLVKQEHKPGFFKQSKKQHPMFPFVEEKIKVDEYGEIIKPEDYKIA
EVLPEAEDNKENIEVKQEEQVQHPAETMSDIPTKCVQTTRTIAVNASVTYIDFEGRSDGE
SLQKILAQLRPRRIVLVRGSPKDTELLAAQARNVGARVFIPSRGETLDATTETHIYQVRL
TDALVSGLNFSRGKGDSEVAWVDALITARDQVCRDVFMDNENEDLIDRTEKILTLEPLPL
NEVPGHQTTFINELKLSDFKQILTKANIPSEFSGGVLWCCNNTIAVRRHEAGKIIMEGCL
SEDYYRVKELLYEQYAIV
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgatcatcaaattacatgccatatcaggtgcattagacgaatcacctccttgt
tatattttgcaagttgatgaattacgcatcttattggactgcggatgggatgaaaaattt
gatccagatttcattaaggaattaaaaagacatgttcatcaaattgatgctgttctgctg
tcttacccagatccattacatttgggagctttaccttatttggtagggaaatgtggtctg
agttgtcctatatatgcaacaattccagtttacaaaatgggccagatgttcatgtatgat
atatatcagtctcgacacaatatggaagactttaatttatttactctcgatgatgttgat
gcagcatttgacaaaattgtgcaattgaaatacaatcaaagtatatctatgaaaggcaaa
ggatatggtgtcacattgacacctttaccagctggacatatgataggtggtacaatatgg
aaaattgtaaaagttggggaagaagatattatatatgctgttgactttaatcacaaaaaa
gagagacatttaaatggatgtgagttggaaaggttgcagagaccatctttactaatcact
gacagtttcaatgcaacttatcaacaagccaggcggcgtacaagagatgaaaaattaatg
acaaatattcttcaaactcttcgtggaggtggaaatgtacttgtaggagttgacacggca
ggcagagtcttggaattagctcacatgttggaccaattatggagaaataaagagtctggt
ttacttgcttattctttagctctattaaataatgtcagttacaacgtcgttgaatttgca
aaatcacaaattgaatggatgagtgataaattgatgaaaagctttgaaggcgccagaaat
aatccatttcaattcaaacatttacaattgtgtcacagtatggctgaattaaatcaagtt
cctagtccaaaggttgtattagctagtactccagatatggagtgtggtttctctcgcgat
ctctttttgcaatggtgtagtaatcctcaaaatagtattataataacaagcagaacgtca
ccaggcacacttgcaagagatctagtggaaaatggtggtaacaggaatataactttagag
attaaaaagaaggtgagattagaaggagctgaattagaagaatatatgaagaaggaaaaa
gtaaagcaagaacaattaaaacaagagaaaatggaaaccgctgatgttagttcggagtcg
gaagatgaaatagaagtgggtggtgctaaaggaaagcacgatttgctagttaaacaagag
cacaagccagggttcttcaagcagagtaaaaagcaacatcctatgttccctttcgtagaa
gaaaaaataaaagtcgacgagtacggcgaaataataaaacctgaagactataaaatagct
gaagtactgccagaggctgaagataacaaagaaaacatagaagttaagcaggaagagcaa
gttcagcacccagctgaaactatgagcgatattccaacaaaatgtgttcaaacaactcgt
actattgccgttaacgcttccgtaacatacatagactttgaaggaagatccgatggtgaa
tcattgcagaaaattcttgcacagttgcggcctcgcagaatagttttagttagaggttct
cctaaggataccgagcttcttgccgcacaagctcggaacgtaggtgctcgcgtgtttata
ccttcaagaggagaaactttggatgcaacgacagaaacacatatttatcaagtacgtttg
acggatgccttggtgagtggattgaatttctctcgtggaaagggagattcggaagtcgct
tgggtcgatgctctgataacagcacgcgaccaggtctgcagagatgtttttatggacaat
gaaaatgaagatctgattgacaggacagaaaaaattctcacattggaaccgctgcctctc
aacgaagttccaggtcatcaaactacctttattaatgaattgaaattatcagatttcaaa
caaattttaactaaagctaatattccctcggagttcagtggcggtgttttgtggtgttgt
aataataccattgcagtgagaaggcacgaggccggcaaaatcataatggagggttgtctc
tctgaagattactacagagtgaaagaattactgtacgaacagtatgcgattgtgtag
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