Nasonia vitripennis (jewel wasp): 100115565
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Entry
100115565 CDS
T01081
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
nvi
Nasonia vitripennis (jewel wasp)
Pathway
nvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nvi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100115565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvi03021
]
100115565
03019 Messenger RNA biogenesis [BR:
nvi03019
]
100115565
Transcription machinery [BR:
nvi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100115565
Messenger RNA biogenesis [BR:
nvi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100115565
U7-dependent histone pre-mRNA processing factors
100115565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
ATPgrasp_Ter
HEAT_2
Motif
Other DBs
NCBI-GeneID:
100115565
NCBI-ProteinID:
XP_001600254
NASONIABASE:
NV12586
UniProt:
A0A7M7G2E2
LinkDB
All DBs
Position
4:complement(32966523..32971945)
Genome browser
AA seq
1112 aa
AA seq
DB search
MDPRIHRRAEPEKSSGDMVAEWLNEATISTNDSVKVQNLCKAQEILLNKEHLLLNVYLDD
ILQFAIDRNAEVRKTIAGFIEEAGVKKPDAIPRIILVLLRLITDPAPVVAKRALRASGRI
LRATLKWAASAQVVTPDMENTWTQISNLKIQIINMIDSDNDGIRTQALKFLEGVVLIQTY
PDPDSPKKPDDFSLEDVPLTLKIARRRKLEEEANHVMDLLIKFFGSPHVSSVNLITCMGS
LSLIAKMRPQFMPNVIQAMQRLQSDLPPTLSDSQVTSVQKQLKLTLFGLLKHPASVEYAQ
PIARQLTQLGCKENEILKYFPKPEEIRRAKKRQQESAAVIAAKKARSEIPVIPMEEEPVP
LPVPPPKVPELIELSENYIAERLSVEIAAELVMDSMAWVPDIMTSVFSREYQPTATADTT
KQRQVIAKLLSVQIKQAKEKKTKITKEKEVDIVMEDLIKNPTISVAEVKRERKREKDREK
EQQAKASLEAHEKSLAKARSRLKSLKLSEVTKPLLKETRDKMLLMAVNRILGTEKSVILG
GVANVRMKILTTLAATFNPYVKEAILRHITEDMRTRLELALCWLYEEYALLQGFQRRTIL
CSKPTEAPHQAYNFLLCTLVSAIDNIQGKDRDVLLTRLYLEAPLITEDAVEALKSISSEE
TRGLTPLILLKDLVIRRPTKQLIFLNVLLCHTGHENNMIRENAIQLVVRLYARPDLSKMI
EEYAGLYLGFLRLPNPPEIVFGQDRGRSQLEENWTESTTRACLSLYLALLTENQSLVHEL
ARVYTSMSAEVKRIVLRLIETPVKSLGMESPQLLELVEKCPKGAEMLIMRIIHILTEKAT
PSPELVAKVRELYQARVSDVRFLIPVLNGLSKKEVIAALPKLIKLNPVSVKEVFNRLLGT
HNNESGVTHTLPLTPAELLIALHNIEPSKAELKTVIKATSLCFAEKTIFNQETVAVVMQQ
LMDMTPLPTLLMRTVIQSLTLYPRLIGFVMNILQRLILKQVWKQPKVWEGFVKCCERTQP
QSFAVVLQLPPAQLVEALKMAPNMRAPLVEHVEAFAENQKAVIPQSIMDVIRGKPPIMMH
DDFDIAPPGDFPMERQDPADLENLEPAPPGLE
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggatcctcgaattcaccgacgtgccgagccggaaaaaagctcaggagatatggttgca
gagtggctaaatgaagctaccataagtaccaatgactctgtcaaagtgcaaaatttgtgc
aaggcacaagaaattctactgaataaggaacatttactcttgaatgtttatctagatgac
atattacaatttgcaatcgacagaaatgcagaggtcaggaaaactatagcaggatttata
gaagaagcaggagtaaagaaacccgatgctatccctagaattatactagttttattaaga
ctaatcaccgatccagcgccggtcgttgccaaacgagctttaagggcaagcggaagaatc
ctgagggccactttaaaatgggcagctagtgctcaagtcgtaaccccggatatggaaaat
acgtggacgcaaataagtaatttgaaaattcaaattataaatatgattgacagtgataat
gatgggatacgtacgcaggcattgaaattcctggaaggagtagtgttgatccaaacatat
ccagatccagactcaccaaagaaacccgatgacttttcattggaagatgtacctctgaca
ctgaagatagctcgtagaagaaagttggaagaggaagctaatcacgtcatggaccttctg
ataaaattctttggatctcctcacgtgagcagtgtcaatttgataacatgcatgggctcg
ttatccctgattgcaaaaatgaggcctcaattcatgccaaacgtcatacaagcaatgcag
aggttgcagagtgatttgccacctacactgtcggattcccaagtgactagtgtacaaaag
cagctgaaactcacattatttgggcttctgaaacatccggcgagtgtagaatatgctcag
ccaattgccagacagctcacgcaactaggttgcaaggagaatgaaatccttaagtacttc
ccaaagcctgaagaaatcaggagagcgaagaaacgacaacaggaaagtgctgctgtcatt
gctgcaaagaaagcaaggtctgagattcctgttatacccatggaagaagagcctgtacct
ctgccagttcctcctccaaaagtgccagagttgatagaactctctgaaaattacattgct
gagaggcttagtgttgaaattgctgcagaattagtcatggacagtatggcttgggtaccg
gacatcatgacgtcagtattctcaagagagtaccagccaacagccacagcagatacgacc
aaacaacggcaggtcatagcaaagctgctgtcagtgcaaataaaacaagccaaggagaag
aaaacgaaaataacaaaagaaaaggaggttgacatagtcatggaggatctgataaagaat
cccaccatcagtgtcgcggaggtcaagcgagaacgaaagcgagaaaaggatagggaaaaa
gaacagcaggctaaggcatcactagaggcacatgaaaaatccttagccaaggccaggagt
cgtctcaagtccttgaaactttcggaggtgacgaagcctcttctcaaggaaacgagagat
aagatgttgctcatggcagttaacagaattctcgggacggaaaaaagtgtgattcttgga
ggtgtcgccaacgtcagaatgaagattctgacgactctagcggcgacgttcaacccatac
gtgaaggaagcaattttacgccacataaccgaggacatgcggacacgcctagaattggcg
ctctgttggttatacgaggagtacgcgttgctccaaggtttccaacgccgaacgatccta
tgctcaaaaccaacggaagcgcctcatcaagcgtataactttttgctatgcaccttggtc
tcggccatcgacaacatacagggcaaggatcgggatgtactgctgacaagactttacctc
gaggcgcctctcataacggaagacgctgtcgaggcgctgaagagtatctcgtcagaggag
acaagaggtttaactccattgatattgcttaaagacctcgtcataaggaggccgacgaag
caactaattttcctcaacgtactattgtgtcacactggacacgagaataacatgatccgt
gaaaatgcaatccaattggtagtccggctgtacgctcgtccagacctcagtaaaatgatt
gaggaatatgcggggttgtacctgggattcttacgtttgccaaatcctccagaaatagtt
ttcggtcaagacagaggtagatcgcagttagaagagaactggaccgagtcgacgactcgt
gcctgcctcagtctctacctcgcgcttctcacggaaaatcaaagtcttgtacacgaacta
gcacgtgtatacacctctatgagtgcagaggtcaagagaattgtgctcaggttaatcgaa
acgccggtcaagagcctggggatggaaagtccgcagttgctggaattggtggaaaaatgt
cccaaaggagcggaaatgctgattatgaggatcattcatattcttactgagaaggctacg
ccgagtcccgaattggttgccaaagttcgagaactttaccaggcgagagtctccgacgtt
cgctttttgatacccgtactcaatggtttgtcgaaaaaggaagtcatcgcagctttgcca
aaactgatcaaattaaatcctgtgtctgtgaaggaagtattcaatagattgctaggtaca
cacaacaacgagagtggagtgactcataccttgccgctcacacctgcggagctattgatt
gctctccataatatagagcctagcaaagctgaactgaagactgttataaaagcgacatca
ttatgctttgctgaaaaaacaattttcaatcaggaaacggtggcagtggtgatgcagcag
cttatggacatgactcccctgccaacgttgttaatgcgaactgtgatacaaagtttgacc
ctatatccacgattgataggatttgttatgaatattctgcaacgtctgatactgaagcaa
gtttggaagcagcccaaggtgtgggagggctttgttaagtgttgtgaaaggactcagccg
cagagttttgcggtcgtgcttcagttacctcctgcgcagctcgtcgaagcgctgaaaatg
gcgccaaacatgcgggcgccactcgtggagcacgtggaagcttttgctgagaaccagaaa
gctgttataccccaatcaattatggatgtgatcagaggaaaaccaccaataatgatgcat
gatgactttgatattgcgcctcctggagatttccccatggaacgtcaagacccagctgac
ctcgaaaatttggaacctgctccgcctggtttagaataa
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integrated database retrieval system
