KEGG   Nasonia vitripennis (jewel wasp): 100115581
Entry
100115581         CDS       T01081                                 
Name
(RefSeq) DNA repair protein RAD50
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
nvi  Nasonia vitripennis (jewel wasp)
Pathway
nvi03440  Homologous recombination
nvi03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:nvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    100115581
   03450 Non-homologous end-joining
    100115581
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nvi03032]
    100115581
   03400 DNA repair and recombination proteins [BR:nvi03400]
    100115581
DNA replication proteins [BR:nvi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    100115581
DNA repair and recombination proteins [BR:nvi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     100115581
    BRCA1-C complex
     100115581
   NHEJ (non-homologous end-joining)
    MRX complex
     100115581
SSDB
Motif
Pfam: AAA_23 SMC_N SbcC_Walker_B Rad50_zn_hook AAA_21 AAA_29 DUF1664 AAA_15 AAA_13 AAA_16 RGCC ABC_tran AAA_28
Other DBs
NCBI-GeneID: 100115581
NCBI-ProteinID: XP_001600265
NASONIABASE: NV18538
UniProt: A0A7M7G1L1
LinkDB
Position
1:22116986..22122927
AA seq 1363 aa
MSRIKDLEIRGIRNFGDERAKVLIHFSKPLTLILGPNGTGKTTIIEALKFVTSGEYPPDS
DRGKSFVHEPKLTLNHTVRGQVKAKILDKSGQELVIIRTMQVSRQKTGALKFQALDNTIT
RLDARTKDKIQITNRCSDIDREMLAAMGVSKPILNYVIFCHQEESNWPLEDGKKLKDRFD
EIFDTSKYNKAMDTITKLIKDLNSEINTLKAREEAFKEILNEAEDQESKLRNNEQREKEV
QDKITVIDQSVVPLEERMKQILDVKSDYQKLEDQLNKVETDYKVTNNYIESLKKHIKQLH
TGSKEELVDKLDSYDQNLTQKVTIKKKSEEKLEETEHCENTLLKKLADARIKLGSLTQKK
IAFDEKITKRNELLKKAFKTWEIPQVDSVTEEEAKDYIERISRKVKEFSIAMKKRAQEFE
QEEKHVQREVDACRSEKTGIDSEMSLKEKERGEIKFEINTLRKKIKQVDEDGGRLDSLEA
DLQNATENFNTVVQNFDEKFIRETLEREASNKKEFNNQLNNIDNEINFLNKQSSQQAELE
LHQNSLLKKEEEISVLRNKNESNLNLLFSNAIPQQKLKDSLEKIQKSLSAEKTNLLKQIE
EGQQKFTTYKTTLKHKESELSKTVSELEACKEKVAFECQENDYDEMLALQERKVKALNDQ
RGIYASQSSMYEEYLKILKKKSCCPLCDRGFHNSSEENSLEQKLHSEIRKSPQALKDCEK
ELKQEQARYDALQQLKPVRDQIREIENNKLPKLRTDVEKIKNQLQDSEQSLETLRLILSE
PEEKLCIYKSIIGDVILLDSYINQRDHLTQTIETKKREMARAGKVSDRTMQEAQDERQKL
KDRLSAVERNVDKAQLALQSGQEKVSRAREQKNKLNEEVLKIRQGQQESSQLKDKVNDLY
KKETYLENSLKSLRQNLVIADEELESKVQELNDLKRKNREKQESDMNFKSISGTEFHELS
TVQKEVQEVMASKLEENLEKIETDVEKTKTECDKMKAEKARLEEHIRFLDEQCRSQEVGK
KDLENNLDLIKKQEFINDLNIKITKYRTTLENMQFNKLRKEYQELQEKKDKFEKEKNEYK
GALGELEIAIRNYKKSLNQEKYRMARHNYKEKQLQVVVQEEAVKNLKEYVTVLDKAMIQF
HEERMNTVNKIMRQLWQLIYSGSDTTSIQIRVQTTEGIGDKKRSYNYKLVQVKRSAEMDM
KGKCSAGQKVLASIIIRMALAETFCSDCAVLALDEPTTNLDDENATNLAVTLSKVIQLRA
QNHKNFQLIVISHDEKFISSLSNLSGKQMFQELYRNPEGYSLVKRRDMSDYIKNSSQSVA
DEDYDESEEEQEQAIEPKNPKKRNLTMDDSPPHGRAVKRRAFH
NT seq 4092 nt   +upstreamnt  +downstreamnt
atgtcgagaataaaagacctcgagattcgaggcatacgaaactttggggacgaaagagca
aaagtacttattcatttttccaaacctctaacgttgattcttggaccaaatggaaccggc
aaaacaacgatcatcgaagctctcaaattcgtcacctctggagagtatccgccggattct
gacagaggaaaatcctttgtacatgaaccaaaactcactttaaatcacacggtacgaggt
caagtaaaagccaaaattttggataaatcaggtcaagaacttgtcattattagaactatg
caggtatcgcgccaaaaaactggagctctgaaatttcaagctttagacaacacaatcaca
agattagatgcgcgaaccaaagataaaatacaaattactaatagatgttctgacattgat
cgagaaatgttagctgcaatgggagtttctaagccaatcttgaattacgtcattttttgt
catcaagaagaatcaaattggcctttagaggatggcaaaaaattaaaagatcgatttgat
gaaatatttgatacttccaaatacaataaagcaatggatactataactaaactcatcaaa
gatctgaattcagaaataaatactttgaaagctcgtgaagaagctttcaaagaaattctg
aatgaagctgaagaccaggaatcaaaactgaggaataatgaacaaagggaaaaagaagta
caggataaaataactgtaatcgatcaatctgtggtacctctcgaagaaagaatgaaacaa
attttagatgttaaatctgattaccagaaacttgaagaccaattaaataaagtcgaaact
gactacaaagtaactaataattatattgaaagtttaaaaaaacatataaaacagttgcac
acaggatctaaagaagaattagtcgacaagttggatagttatgatcaaaatttaactcaa
aaagttacaataaaaaagaagtctgaagaaaaactagaagagactgagcactgtgaaaat
actctacttaaaaaacttgccgatgctagaattaaattaggttcattaacacagaaaaaa
atcgcatttgatgaaaagattacaaagcgtaatgagcttttaaaaaaagctttcaaaact
tgggaaatacctcaagttgattcagtcactgaagaagaagcaaaagattatattgaacgt
atcagtagaaaggttaaagaattttcaatagctatgaaaaaaagagcacaagaatttgaa
caagaggaaaaacatgtccaaagagaagtagatgcctgtagaagtgaaaaaacaggaata
gattcagaaatgtcacttaaggaaaaagaaagaggcgaaataaaatttgaaataaataca
ttgagaaaaaaaataaaacaagtagatgaagacggtggcagattggacagtttagaagca
gacttgcaaaatgctactgaaaactttaatacagttgttcaaaattttgacgagaaattt
atcagagaaactttagaaagagaagcttcaaataagaaagaatttaataaccagttaaat
aatatagataacgaaataaatttcttaaataaacaaagctcccaacaagctgaattagaa
ttgcatcaaaacagtttgctgaaaaaagaggaggaaatttctgtcttaagaaataaaaat
gagagcaatttaaatttgttattcagtaacgcaattccgcaacaaaaattgaaagatagc
ttagagaaaattcaaaagtcattgtctgcagaaaagacaaatttactaaaacaaattgaa
gaagggcagcaaaaatttactacgtataaaacaacattgaaacacaaagaaagtgagcta
tccaaaacagtatctgaacttgaagcatgcaaggaaaaagtggcattcgaatgccaggaa
aatgactatgacgaaatgttagcattgcaagagagaaaagttaaagcactcaatgatcaa
agaggtatttatgcaagtcaatcctcaatgtatgaagaatatttgaaaattctgaagaaa
aaatcgtgctgtccattatgtgacagaggatttcacaattcttccgaagaaaattcgtta
gagcaaaagttgcattcagaaattagaaaaagtcctcaagctttgaaagattgtgaaaag
gaattgaagcaagagcaagctcgttatgatgcattacagcagttgaaacctgtgagagac
cagataagagaaattgaaaacaataaattacccaaacttagaactgatgtagaaaaaatt
aaaaatcaacttcaagattccgaacaaagtttagaaactttacgtcttatattatcggaa
cctgaagaaaagttgtgtatatacaagtcaattatcggagatgttattttattggatagt
tacattaatcaaagggatcatttaactcaaacgattgaaactaagaagcgcgaaatggct
agagcgggtaaagttagcgatcgaaccatgcaagaagctcaagatgagcgacagaaactc
aaagataggctttctgctgttgaaagaaacgttgataaagctcaattagctctgcaaagt
ggccaagaaaaagtgagtagagcaagagaacagaaaaataaactgaatgaggaagtatta
aaaatcagacaaggccagcaagaatcaagtcaattaaaagacaaagtaaatgatttgtat
aaaaaagaaacttatctcgaaaactctttaaagtctttaagacaaaatctggttatagct
gatgaagaattggaaagcaaagttcaggaattaaatgatcttaagcgaaaaaatcgtgaa
aaacaagaaagcgatatgaatttcaaatctattagtggaacggagtttcacgaactatca
acagttcagaaagaagtacaagaagttatggctagtaagttagaggaaaatttggaaaaa
atcgagacagatgttgaaaaaacaaaaacagaatgcgataaaatgaaagcagaaaaggca
agattagaggaacacattcgtttcttagacgaacaatgtagatctcaagaagtggggaag
aaagatcttgaaaataatttggatttaattaaaaaacaagaatttattaacgacttgaat
attaaaatcactaaatatcgaactacgttagagaatatgcaatttaataaattaagaaag
gaataccaagaattacaagaaaaaaaagacaaatttgagaaagagaaaaacgaatataaa
ggagcattgggtgaattggaaattgctataagaaattataaaaagagtttaaatcaagaa
aagtacagaatggctcgtcacaattacaaggaaaaacagttgcaagtagtggtgcaagaa
gaggctgtaaaaaatttgaaagagtacgtgacggttttagataaagctatgatacagttt
cacgaagaaagaatgaatactgtaaacaaaataatgcgtcagctgtggcagttaatatat
agtggctctgatacaacttcaattcaaattagagtacaaactaccgaaggtataggtgat
aaaaagcgctcttataattataaacttgttcaagttaaaagatcagcagaaatggatatg
aaaggcaaatgtagtgctggtcaaaaggttcttgcttctatcattattcgaatggcctta
gctgaaacattttgcagcgactgcgctgtccttgcattagatgaacctacgacaaacctc
gatgacgaaaacgcaacgaacttggccgttaccttatctaaagttattcaactacgtgcg
caaaatcataagaatttccagttaattgttataagtcacgacgaaaaatttatttcttca
ttatcgaatttaagcggaaagcaaatgtttcaagaactttatagaaaccctgaaggatac
agtttagttaaacgtagagatatgtcagattacataaaaaatagttcgcaaagtgtggcc
gatgaagattacgatgaatctgaagaagaacaagaacaagcaatagaaccaaaaaatcca
aaaaagcgaaatttaactatggatgattctcctccacatggccgcgctgttaaaagaaga
gcattccattaa

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