Nasonia vitripennis (jewel wasp): 100115581
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Entry
100115581 CDS
T01081
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
nvi
Nasonia vitripennis (jewel wasp)
Pathway
nvi03440
Homologous recombination
nvi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100115581
03450 Non-homologous end-joining
100115581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nvi03032
]
100115581
03400 DNA repair and recombination proteins [BR:
nvi03400
]
100115581
DNA replication proteins [BR:
nvi03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
100115581
DNA repair and recombination proteins [BR:
nvi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
100115581
BRCA1-C complex
100115581
NHEJ (non-homologous end-joining)
MRX complex
100115581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
Rad50_zn_hook
AAA_21
AAA_29
DUF1664
AAA_15
AAA_13
AAA_16
RGCC
ABC_tran
AAA_28
Motif
Other DBs
NCBI-GeneID:
100115581
NCBI-ProteinID:
XP_001600265
NASONIABASE:
NV18538
UniProt:
A0A7M7G1L1
LinkDB
All DBs
Position
1:22116986..22122927
Genome browser
AA seq
1363 aa
AA seq
DB search
MSRIKDLEIRGIRNFGDERAKVLIHFSKPLTLILGPNGTGKTTIIEALKFVTSGEYPPDS
DRGKSFVHEPKLTLNHTVRGQVKAKILDKSGQELVIIRTMQVSRQKTGALKFQALDNTIT
RLDARTKDKIQITNRCSDIDREMLAAMGVSKPILNYVIFCHQEESNWPLEDGKKLKDRFD
EIFDTSKYNKAMDTITKLIKDLNSEINTLKAREEAFKEILNEAEDQESKLRNNEQREKEV
QDKITVIDQSVVPLEERMKQILDVKSDYQKLEDQLNKVETDYKVTNNYIESLKKHIKQLH
TGSKEELVDKLDSYDQNLTQKVTIKKKSEEKLEETEHCENTLLKKLADARIKLGSLTQKK
IAFDEKITKRNELLKKAFKTWEIPQVDSVTEEEAKDYIERISRKVKEFSIAMKKRAQEFE
QEEKHVQREVDACRSEKTGIDSEMSLKEKERGEIKFEINTLRKKIKQVDEDGGRLDSLEA
DLQNATENFNTVVQNFDEKFIRETLEREASNKKEFNNQLNNIDNEINFLNKQSSQQAELE
LHQNSLLKKEEEISVLRNKNESNLNLLFSNAIPQQKLKDSLEKIQKSLSAEKTNLLKQIE
EGQQKFTTYKTTLKHKESELSKTVSELEACKEKVAFECQENDYDEMLALQERKVKALNDQ
RGIYASQSSMYEEYLKILKKKSCCPLCDRGFHNSSEENSLEQKLHSEIRKSPQALKDCEK
ELKQEQARYDALQQLKPVRDQIREIENNKLPKLRTDVEKIKNQLQDSEQSLETLRLILSE
PEEKLCIYKSIIGDVILLDSYINQRDHLTQTIETKKREMARAGKVSDRTMQEAQDERQKL
KDRLSAVERNVDKAQLALQSGQEKVSRAREQKNKLNEEVLKIRQGQQESSQLKDKVNDLY
KKETYLENSLKSLRQNLVIADEELESKVQELNDLKRKNREKQESDMNFKSISGTEFHELS
TVQKEVQEVMASKLEENLEKIETDVEKTKTECDKMKAEKARLEEHIRFLDEQCRSQEVGK
KDLENNLDLIKKQEFINDLNIKITKYRTTLENMQFNKLRKEYQELQEKKDKFEKEKNEYK
GALGELEIAIRNYKKSLNQEKYRMARHNYKEKQLQVVVQEEAVKNLKEYVTVLDKAMIQF
HEERMNTVNKIMRQLWQLIYSGSDTTSIQIRVQTTEGIGDKKRSYNYKLVQVKRSAEMDM
KGKCSAGQKVLASIIIRMALAETFCSDCAVLALDEPTTNLDDENATNLAVTLSKVIQLRA
QNHKNFQLIVISHDEKFISSLSNLSGKQMFQELYRNPEGYSLVKRRDMSDYIKNSSQSVA
DEDYDESEEEQEQAIEPKNPKKRNLTMDDSPPHGRAVKRRAFH
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagaataaaagacctcgagattcgaggcatacgaaactttggggacgaaagagca
aaagtacttattcatttttccaaacctctaacgttgattcttggaccaaatggaaccggc
aaaacaacgatcatcgaagctctcaaattcgtcacctctggagagtatccgccggattct
gacagaggaaaatcctttgtacatgaaccaaaactcactttaaatcacacggtacgaggt
caagtaaaagccaaaattttggataaatcaggtcaagaacttgtcattattagaactatg
caggtatcgcgccaaaaaactggagctctgaaatttcaagctttagacaacacaatcaca
agattagatgcgcgaaccaaagataaaatacaaattactaatagatgttctgacattgat
cgagaaatgttagctgcaatgggagtttctaagccaatcttgaattacgtcattttttgt
catcaagaagaatcaaattggcctttagaggatggcaaaaaattaaaagatcgatttgat
gaaatatttgatacttccaaatacaataaagcaatggatactataactaaactcatcaaa
gatctgaattcagaaataaatactttgaaagctcgtgaagaagctttcaaagaaattctg
aatgaagctgaagaccaggaatcaaaactgaggaataatgaacaaagggaaaaagaagta
caggataaaataactgtaatcgatcaatctgtggtacctctcgaagaaagaatgaaacaa
attttagatgttaaatctgattaccagaaacttgaagaccaattaaataaagtcgaaact
gactacaaagtaactaataattatattgaaagtttaaaaaaacatataaaacagttgcac
acaggatctaaagaagaattagtcgacaagttggatagttatgatcaaaatttaactcaa
aaagttacaataaaaaagaagtctgaagaaaaactagaagagactgagcactgtgaaaat
actctacttaaaaaacttgccgatgctagaattaaattaggttcattaacacagaaaaaa
atcgcatttgatgaaaagattacaaagcgtaatgagcttttaaaaaaagctttcaaaact
tgggaaatacctcaagttgattcagtcactgaagaagaagcaaaagattatattgaacgt
atcagtagaaaggttaaagaattttcaatagctatgaaaaaaagagcacaagaatttgaa
caagaggaaaaacatgtccaaagagaagtagatgcctgtagaagtgaaaaaacaggaata
gattcagaaatgtcacttaaggaaaaagaaagaggcgaaataaaatttgaaataaataca
ttgagaaaaaaaataaaacaagtagatgaagacggtggcagattggacagtttagaagca
gacttgcaaaatgctactgaaaactttaatacagttgttcaaaattttgacgagaaattt
atcagagaaactttagaaagagaagcttcaaataagaaagaatttaataaccagttaaat
aatatagataacgaaataaatttcttaaataaacaaagctcccaacaagctgaattagaa
ttgcatcaaaacagtttgctgaaaaaagaggaggaaatttctgtcttaagaaataaaaat
gagagcaatttaaatttgttattcagtaacgcaattccgcaacaaaaattgaaagatagc
ttagagaaaattcaaaagtcattgtctgcagaaaagacaaatttactaaaacaaattgaa
gaagggcagcaaaaatttactacgtataaaacaacattgaaacacaaagaaagtgagcta
tccaaaacagtatctgaacttgaagcatgcaaggaaaaagtggcattcgaatgccaggaa
aatgactatgacgaaatgttagcattgcaagagagaaaagttaaagcactcaatgatcaa
agaggtatttatgcaagtcaatcctcaatgtatgaagaatatttgaaaattctgaagaaa
aaatcgtgctgtccattatgtgacagaggatttcacaattcttccgaagaaaattcgtta
gagcaaaagttgcattcagaaattagaaaaagtcctcaagctttgaaagattgtgaaaag
gaattgaagcaagagcaagctcgttatgatgcattacagcagttgaaacctgtgagagac
cagataagagaaattgaaaacaataaattacccaaacttagaactgatgtagaaaaaatt
aaaaatcaacttcaagattccgaacaaagtttagaaactttacgtcttatattatcggaa
cctgaagaaaagttgtgtatatacaagtcaattatcggagatgttattttattggatagt
tacattaatcaaagggatcatttaactcaaacgattgaaactaagaagcgcgaaatggct
agagcgggtaaagttagcgatcgaaccatgcaagaagctcaagatgagcgacagaaactc
aaagataggctttctgctgttgaaagaaacgttgataaagctcaattagctctgcaaagt
ggccaagaaaaagtgagtagagcaagagaacagaaaaataaactgaatgaggaagtatta
aaaatcagacaaggccagcaagaatcaagtcaattaaaagacaaagtaaatgatttgtat
aaaaaagaaacttatctcgaaaactctttaaagtctttaagacaaaatctggttatagct
gatgaagaattggaaagcaaagttcaggaattaaatgatcttaagcgaaaaaatcgtgaa
aaacaagaaagcgatatgaatttcaaatctattagtggaacggagtttcacgaactatca
acagttcagaaagaagtacaagaagttatggctagtaagttagaggaaaatttggaaaaa
atcgagacagatgttgaaaaaacaaaaacagaatgcgataaaatgaaagcagaaaaggca
agattagaggaacacattcgtttcttagacgaacaatgtagatctcaagaagtggggaag
aaagatcttgaaaataatttggatttaattaaaaaacaagaatttattaacgacttgaat
attaaaatcactaaatatcgaactacgttagagaatatgcaatttaataaattaagaaag
gaataccaagaattacaagaaaaaaaagacaaatttgagaaagagaaaaacgaatataaa
ggagcattgggtgaattggaaattgctataagaaattataaaaagagtttaaatcaagaa
aagtacagaatggctcgtcacaattacaaggaaaaacagttgcaagtagtggtgcaagaa
gaggctgtaaaaaatttgaaagagtacgtgacggttttagataaagctatgatacagttt
cacgaagaaagaatgaatactgtaaacaaaataatgcgtcagctgtggcagttaatatat
agtggctctgatacaacttcaattcaaattagagtacaaactaccgaaggtataggtgat
aaaaagcgctcttataattataaacttgttcaagttaaaagatcagcagaaatggatatg
aaaggcaaatgtagtgctggtcaaaaggttcttgcttctatcattattcgaatggcctta
gctgaaacattttgcagcgactgcgctgtccttgcattagatgaacctacgacaaacctc
gatgacgaaaacgcaacgaacttggccgttaccttatctaaagttattcaactacgtgcg
caaaatcataagaatttccagttaattgttataagtcacgacgaaaaatttatttcttca
ttatcgaatttaagcggaaagcaaatgtttcaagaactttatagaaaccctgaaggatac
agtttagttaaacgtagagatatgtcagattacataaaaaatagttcgcaaagtgtggcc
gatgaagattacgatgaatctgaagaagaacaagaacaagcaatagaaccaaaaaatcca
aaaaagcgaaatttaactatggatgattctcctccacatggccgcgctgttaaaagaaga
gcattccattaa
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