Nasonia vitripennis (jewel wasp): 100116310
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Entry
100116310 CDS
T01081
Symbol
LCCH3
Name
(RefSeq) ligand-gated chloride channel homolog 3 precursor
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
nvi
Nasonia vitripennis (jewel wasp)
Pathway
nvi04080
Neuroactive ligand-receptor interaction
nvi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
nvi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100116310 (LCCH3)
04082 Neuroactive ligand signaling
100116310 (LCCH3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nvi04040
]
100116310 (LCCH3)
Ion channels [BR:
nvi04040
]
Ligand-gated channels
GABA-A
100116310 (LCCH3)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
100116310
NCBI-ProteinID:
NP_001234895
NASONIABASE:
NV14245
UniProt:
D3UAF7
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Position
3:21105173..21119671
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AA seq
512 aa
AA seq
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MTRTSASMESSPSRLIAGALLIVLALADLSHRAACFLQSGSTELSDRLANVTQTISRILD
GYDIRLRPNFGGDPLFVEMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFSHEKEIL
TLSGDFAEKIWVPDTFFANDKHSFLHDVTERNKLVRLAGDGSVTYGMRFTTTLACMMDLH
YYPLDSQNCTVEIESYGYTVLDVVMSWKETPVRGVDEAKLPQFTIIGYETNDRKEKLATG
IYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTT
ISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGARAKKKSKKKETEEK
KTICSSKTGSKASSPFPGSTDADIIELQDLRLSPLPSIRNRSGLASGAATPGGPSSSGAR
LDQLHDPGKFPPSFRISRPPGYSTHAKSPGLRYRGTRHQRPKVLHAIKRGASVLKASMPK
IKDVNLIDKYSRIIFPVSFMLFNAGYWIFYVL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgacgaggaccagcgcctctatggagtcctcgccgagcagactcatcgccggcgcgctc
ctgatcgtcctggcactcgctgacctgtcgcatcgggccgcttgttttttgcagagtggc
tcgacggagttatcggacaggctcgcgaacgtgacgcaaacgatctcgaggatcctcgac
ggctacgatattcggctgaggccgaatttcggtggcgatcctctgttcgttgagatggat
ctcacgatagcgagtttcgacgctatttctgaagtcaatatggattacacgataacgatg
tacctcaatcaatactggaaggacgagaggctggctttctcgcacgaaaaggagattctc
accctcagcggcgactttgccgagaaaatctgggtgccggacaccttcttcgccaacgac
aaacacagcttcctgcacgacgtgacggagcgcaacaagctcgtgcgactggcgggcgac
ggctcggtcacctacggcatgaggttcaccacgacgctggcctgcatgatggacctgcac
tactacccactcgactcgcagaactgcaccgtcgaaatcgagagctacggctacacggta
ctggacgtggtgatgtcgtggaaggagacgccggtacggggcgtcgacgaggcgaagctg
ccccaattcacgataatcggctacgagacgaacgaccgcaaggagaagttggcgactggc
atctaccagaggctgtcgctcagtttcaagctacagcgcaacatcggctacttcgtcttc
cagacctatctgccgagcatcctcatcgtcatgctcagctgggtcagcttctggatcaat
cacgaggcgaccagcgcacgcgtcgctctcggcataacgaccgtgctgacaatgacgacg
atatcgacgggggtgaggagttctttgccgcggatcagctacgtgaaagccatcgacatc
tacttggtcatgtgcttcgtctttgtgttcgcggcgctgctcgagtacgcggccgttaat
tacacgtactggggcgccagggccaaaaagaagagcaagaagaaggagaccgaggagaaa
aaaaccatctgctcttcaaagactggaagcaaagcgagctccccatttcctggctcgacc
gacgcggacataatcgagctgcaggatctgcgactatcgccgctgcccagcatcagaaat
cgatcgggtctggcgtcgggcgcagcgacgcccggcggaccgtcgtcctcgggagcgagg
cttgaccagcttcacgaccccggaaagttcccaccgagcttcaggatctcaaggccgccg
ggatacagcacccacgccaagagtcctggactgcgttatcggggcactcggcatcagagg
ccgaaggtcctgcacgcgataaagcgaggagcctcggtgctgaaggcctcgatgcccaag
atcaaggatgtgaacctcatcgacaagtactcgcgcatcatattccccgtgagcttcatg
ctcttcaacgccggctactggatcttctacgtgctgtga
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