Entry |
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Name |
(RefSeq) probable ATP-dependent RNA helicase DDX56
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KO |
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Organism |
nvi Nasonia vitripennis (jewel wasp)
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Brite |
KEGG Orthology (KO) [BR:nvi00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:nvi03009]
100116447
Enzymes [BR:nvi01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100116447
Ribosome biogenesis [BR:nvi03009]
Eukaryotic type
Pre-60S particles
Helicases
100116447
|
SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
1:4142515..4146493
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AA seq |
555 aa
MSSTKSNEDVSEEETEEKTKQFHELGLDDRILKAIAKLGWLEPTLIQEKTIPLILDGKDV
LVRARTGSGKTGAFAVPLVQKILSNKETQQHQQTTGLILAPSKELCKQIHEVFVNLTTKC
SREVRCLDISPQVELSVQKPLLAENPDIVIATPGRALQHLKAKNLNVKKSLETLIIDEAD
LIFSFGYEEEIKTLLAYLPTVYQAILASATLSEDVLSLKKLVLHNPAILKLEEPPLAPPS
QLAHYTLAAEENDKAAILYALLKLHLIRGKCIIFVNTVDRCYKLKLFLEQFGIPTCVLNS
ELPASSRCRAVTQFNSGTYDIIIASDEKALEEPHVMKQKRGKRRKDKESGVARGIDFQFV
SNVINFDFPLDINAYIHRAGRTARGKNQGTALSFVAIRERPMLEQVEEQLKKDYGQENLF
KTYQFKLNEVEGFRYRSRDAWKAVTRIAVREARLKEIKQEVLTCDKLKSYFEDNPRDLQS
LRQDKALHTVRLQAHLKDVPEYIVPASLKSMANIGRRKRKFNRDAAASGASAAKSKYQAR
ASNPLAALTLAKKKK |
NT seq |
1668 nt +upstreamnt +downstreamnt
atgtcttctactaaatcgaacgaagatgtttcagaggaggaaaccgaagagaagacgaaa
cagtttcacgagcttggcttggacgacagaatattaaaggcaattgccaagttgggttgg
ctcgaacccacacttatacaggaaaagaccattcctctaatcctagatggtaaagatgtc
cttgtaagagccaggacaggctctggaaagacaggagcttttgcagtacctctggtccaa
aagatcctgtcgaacaaggaaacacaacagcaccagcagacaactggcctgattttagct
cccagcaaggagctgtgcaaacaaattcacgaggtctttgtaaacctcaccacaaaatgt
agcagagaagttaggtgtttggacatcagtccccaagtagagctttctgtacagaaacct
ctgttggctgaaaatccagacattgtgatcgctaccccaggtagagctttgcagcatttg
aaggccaagaatttaaatgtcaagaaaagcttggagactctgattattgatgaggctgat
ctgattttctcctttggctatgaagaagaaatcaaaacacttttagcatatttgccaact
gtttaccaggcaattttggcttctgccacattgtctgaagatgtattgtcactgaaaaaa
ttggttcttcacaatcctgctattttaaagctggaagaaccaccattagcgccaccttca
caattggcacattataccctggcagctgaagaaaatgacaaagctgcaattttgtatgca
ttgttaaagttacacttaataaggggaaagtgtattatttttgtgaatactgtagatagg
tgttacaaattaaaattgttcctggagcaattcgggattcccacctgcgttttaaattcg
gaattgccagctagctcgagatgtagagcagttacacaattcaatagcggaacgtacgac
ataatcatagcttctgatgagaaagcgttggaagagcctcacgttatgaagcagaaaaga
ggcaaacgtcggaaagacaaagaatctggtgtggctcgcggtatagatttccagtttgtc
tccaacgtgataaacttcgacttccctctcgatataaatgcgtacatacacagggcagga
cgaactgccagaggaaagaatcagggaacagccctgagttttgtagcaatcagggagcga
ccgatgctagaacaggtcgaggaacagctgaagaaagattatggtcaagaaaacctgttt
aaaacttaccaattcaaacttaacgaagtagaaggattcaggtatcgatcgagagacgcc
tggaaggccgtgacgcgtatcgcggtccgcgaagcccgactaaaggaaattaaacaagaa
gttctgacttgcgacaaactaaaaagctacttcgaggacaatccgcgcgatcttcaatcg
ctccgacaagacaaagctcttcacaccgtgagactccaagcccatctaaaagacgttcca
gaatacatagtaccagcttcgttgaaaagcatggcaaatatcggccgcagaaagcgtaag
ttcaaccgggatgcagccgcctctggagcaagcgccgccaaatcgaaatatcaagctcga
gcttccaaccctctcgctgctctcactctcgccaagaagaagaagtag |