KEGG   Nasonia vitripennis (jewel wasp): 100116778
Entry
100116778         CDS       T01081                                 
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
nvi  Nasonia vitripennis (jewel wasp)
Pathway
nvi03013  Nucleocytoplasmic transport
nvi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100116778
  09122 Translation
   03013 Nucleocytoplasmic transport
    100116778
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nvi03019]
    100116778
   03041 Spliceosome [BR:nvi03041]
    100116778
Messenger RNA biogenesis [BR:nvi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     100116778
Spliceosome [BR:nvi03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100116778
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_IP5PC_F EIF3I WD40_Gbeta Beta-prop_WDR41 Beta-prop_ACSF4 Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_TEP1_C WDR54 Beta-prop_NUP159_NUP214 Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N WD40_like Beta-prop_EIPR1
Other DBs
NCBI-GeneID: 100116778
NCBI-ProteinID: XP_001601192
NASONIABASE: NV15000
UniProt: A0A7M7G349
LinkDB
Position
3:18173257..18175325
AA seq 337 aa
MKYGENMGENLNSKLFYNTILCQTFSPDGRYLLAGNVYGDISVYDLSTALGPRQTDDEEF
LGPTYQFKAHPDQQVQSMLTTNNFLVTGTCGEVAGWDWKSVTSSKSLKIKPSWVVQIPSK
KDSLEKPDVNCMVYSKENHLIYAGCGDNKIHTINLDTGKIISSLAGHTDFIHSISVFGKQ
LASGGEDGTVRLWDLRNKENTNILQPHLNDKVARPKIGKWIGAVDFTDDWLLCGGGPKLS
LWHVRTMEAATVFDLPDEGIHVADIFEERIITGGAMPYLYHLTYQGVPLAKVPISSKTVY
SVIYQENPQKVLSIGGSSNKIDVCTNFNYREMVLKFA
NT seq 1014 nt   +upstreamnt  +downstreamnt
atgaagtacggagagaatatgggtgaaaatttaaattctaagttgttttacaacactata
ctttgccaaacattttccccggatgggcggtatttgctagctgggaatgtttatggcgac
atttcggtgtacgacttgtccacagcacttggacctagacaaaccgacgatgaggaattt
ctgggacccacataccaattcaaagcacacccagaccaacaagtacagagtatgctcaca
acaaataactttttagtcactggcacatgtggagaagttgctggatgggattggaaatca
gtcacttcgtcaaaatctttaaaaatcaaaccttcctgggtagttcaaatacctagtaaa
aaagacagccttgaaaaaccagatgtgaattgtatggtgtattccaaagaaaatcatcta
atttatgctggctgtggagataataaaattcataccattaatttggatactggaaaaata
attagtagcttggctgggcatactgattttattcatagtatatcagtttttggtaagcaa
ctagcttcaggaggtgaagatggaacagttagattatgggatcttcgtaataaggaaaac
acaaatatcttgcaaccacacttgaatgataaagtggcaaggcctaaaataggaaagtgg
attggagctgtggatttcacagatgattggctgctatgtggtggaggcccaaaactatcc
ttgtggcatgtgagaactatggaagctgcaactgtctttgatcttccagatgaaggcatt
catgttgcagacatctttgaagagcgaataattacaggtggagctatgccttatctgtac
catttaacatatcagggtgtaccattggccaaagttcctatttcaagtaaaacggtttat
agcgtgatttaccaagagaaccctcaaaaagttttaagtattggaggttcaagcaataaa
attgatgtatgtacaaacttcaattaccgtgagatggttttaaaattcgcgtga

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