Nasonia vitripennis (jewel wasp): 100117259
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Entry
100117259 CDS
T01081
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
nvi
Nasonia vitripennis (jewel wasp)
Pathway
nvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100117259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvi03041
]
100117259
Enzymes [BR:
nvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100117259
Spliceosome [BR:
nvi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
100117259
Complex C
U4/U6.U5 tri-SnRNP related factors
100117259
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_N
HA2_C
Helicase_C
DEAD
AAA_19
AAA_22
nSTAND3
AAA_30
Flavi_DEAD
Cas3-like_C_2
TsaE
T2SSE
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
100117259
NCBI-ProteinID:
XP_001601553
NASONIABASE:
NV10615
UniProt:
A0A7M7G3V6
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Position
5:27455378..27459206
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AA seq
884 aa
AA seq
DB search
MSKYRKKESSTEESDSEEEQRKKDLKERDEFANRLKTKDENKTRKVALPLGSGAAEAAKR
LKIMEEESKDKLVPKLRIESRRKYLEKRKEDKVAELEADILDDEYLFDEEILTEREKKER
AHKKELLRIAKEHEKAREIERIQRYHMPHEKKKGEPEQDYTDREPPQSEQSKWESDQMSS
AVFKFGAKNKKAQEEYELLLADEVEFVQALQMPGDKKDKKIEEKPKERKLTTIEETQKSL
PIYPFKKELIQAIRDHQVLIIKGETGSGKTTQIPQYLYEAGFTEGDKLIGCTQPRRVAAM
SVAARVAHEMSVKLGNEVGYAIRFEDCTSHRTRIKYMTDGTLHREFLSEPDLASYSVMII
DEAHERTLHTDILFGLVKDIARFRSDLKLLISSATLDATKFSEFFDDAPIFQVPGRRYPV
DIFYTKAPEADYIDAAVVSILQIHATQPPGDILVFLTGQEEIETCFEMLQDRVRRLGSKL
GELLILPVYANLPSDMQAKIFMPTPPGARKVVLATNIAETSLTIDNIIYVIDPGFAKQNN
FNSRTGMESLMVVPISKASANQRAGRAGRVAPGKCFRLYTAWAYQHELEENTVPEIQRIN
LGNAVLTLKALGINDLVHFDFLDPPPHETLVLALEQLYALGALNHRGELTKLGRRMAEFP
VDPMMAKMLLASEKYRCSEEISTIAAMLSVNGAIFYRPKDKIIHADAARKNFNVPGGDHL
VLLNVYNQWAQSGFSTHWCYENFIQHKSMKRARDVKEQLVGLMERVEMELVSGISETVNI
RKAITAGYFYHIAKLSKGGSYKTAKHNQTVSVHPNSALFQELPRWVLYHELVFTTKEFMR
QVTEIESKWLLEVAPHYYKPKELEDSTNKKMPKVAGRAGPDGTN
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtacaggaagaaagaatcttcaacagaagagagtgacagcgaagaggagcag
agaaagaaggaccttaaggaaagagatgagtttgcaaaccgtttgaaaactaaagatgag
aacaaaacaagaaaagtggcattgccacttggatctggagctgctgaggcagcaaaaaga
ctcaagatcatggaggaagagtcaaaagacaagcttgtgcctaagctgcgtatagagtct
cgcagaaaatatctagagaaaagaaaggaagataaagttgccgaattagaagctgacatt
ctagatgatgagtacttgttcgatgaggaaatattaacagaaagggaaaaaaaagaacga
gctcacaagaaagaattgctccgaatagctaaagaacatgaaaaggccagagaaattgag
cggattcagaggtatcacatgcctcatgaaaaaaagaagggtgagcctgaacaggactac
acagacagagaacctcctcagtcagaacagagcaaatgggaatctgatcagatgtcctct
gctgtatttaaatttggtgcaaagaataaaaaagcacaagaagaatacgaactactcctg
gcggatgaggttgaatttgtacaagctctgcaaatgccaggtgataaaaaagataaaaaa
attgaggaaaagcctaaagagcgtaagttaacgacgatcgaagaaacgcaaaaaagttta
ccaatatacccgtttaaaaaagaattaatccaagcaataagagatcaccaggtacttatt
attaaaggagagactggctcgggtaaaacgacccaaatacctcagtatctgtacgaagct
ggatttacagaaggagacaaattaatcggctgtacgcagccgagaagagtggcggcgatg
tcagttgctgcccgagttgctcacgagatgagtgtaaagttaggtaacgaagtcggctat
gctattcgttttgaagactgcacatctcatcgcacgagaataaaatacatgacggacggt
acactgcatcgagaatttttgagtgaaccggatttggcttcttacagcgttatgataatt
gatgaagctcacgaaagaactttacacacggatattctcttcggtctggtaaaagatata
gcacggtttcggtcagatttgaaattgctaatatcgtcagctacactggatgcaacgaaa
ttcagtgagttttttgatgacgcaccgatttttcaagtacctggacgaaggtatcctgtc
gacatattctatacaaaggcgccagaagcggattatatagatgcggcagtcgtctctatt
ttgcaaatacacgccacacagcctcccggcgatattcttgtattcttgacaggtcaggaa
gaaattgaaacatgttttgaaatgctgcaagatagagtcaggaggttgggtagcaaatta
ggcgaacttttgattttacccgtttacgccaatcttcctagtgacatgcaggctaaaatc
tttatgccaacacctccaggggcaaggaaggtggttttggctactaacattgcagaaacg
tcgctgaccatagataacataatctacgtcatcgatcctgggttcgccaagcaaaacaat
tttaattcacgtacgggcatggagagtttgatggtggtccctattagtaaagcgtcagca
aatcaacgagcaggacgagccggaagagttgctcccggaaaatgtttcagactatacact
gcctgggcttaccagcacgagttagaagaaaataccgttccagagatacaaagaatcaat
ctaggtaacgcagtacttacgctgaaagcgttaggtataaacgacttggtccactttgat
ttcttggaccctccgccacacgagacactcgtactcgctctggaacagttgtatgcctta
ggagcactcaatcatagaggtgaactcactaagctcggcagaagaatggccgagtttcca
gtagacccgatgatggcgaagatgctacttgcgagcgagaagtatcgttgttcggaagaa
atttccacgatcgccgctatgctctctgtcaacggtgcaatattttacagacctaaagat
aaaattatccatgccgatgctgcacggaagaatttcaatgtacctggtggcgaccatctg
gttttgttgaacgtttataatcagtgggcgcagagcggctttagtacgcattggtgttat
gagaattttatacaacacaaatcaatgaaaagggctcgagatgttaaggaacaacttgtt
gggttaatggaacgggttgaaatggaacttgtttctggtatatcagaaaccgtgaatatc
agaaaagctattacagcggggtatttttatcatattgctaagttatccaaaggaggttcg
tacaaaacagcaaagcacaaccagacggtatcagtgcatcccaatagtgctctatttcag
gagttaccaagatgggtcttgtatcacgagctggtattcacaaccaaagagttcatgaga
caggtaaccgaaatagagtccaagtggcttctagaagtagctcctcattactacaagcct
aaagaattagaagattcaacaaataagaaaatgccaaaagtagcaggtcgtgcaggtcca
gatgggacaaattaa
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