Nasonia vitripennis (jewel wasp): 100118067
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Entry
100118067 CDS
T01081
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
nvi
Nasonia vitripennis (jewel wasp)
Pathway
nvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100118067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvi03019
]
100118067
03041 Spliceosome [BR:
nvi03041
]
100118067
Messenger RNA biogenesis [BR:
nvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100118067
Spliceosome [BR:
nvi03041
]
Complex B
Other components
Prp19-related factors
100118067
Complex C
100118067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
TPR_15
TPR_2
TPR_8
TPR_12
NRDE-2
PPR
TPR_10
TPR_7
DHR-2_Lobe_A
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
100118067
NCBI-ProteinID:
XP_008208020
NASONIABASE:
NV15907
UniProt:
A0A7M7H612
LinkDB
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Position
2:8875908..8880491
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AA seq
851 aa
AA seq
DB search
MLLANKIQDKMEPEQHYVFHNEEDLLYEEEILRNAYSVKHWWRYIDHLRTTQSPNLNVVY
ERALKELPGSYKLWYAYLRHRVKQLVGRPINDPLYEVVNNAFERALVFMHKMPRIWMDYC
TLMTEQGYITRTRHIFDRALRALPITQHHRIWPLYIDFVKRHNVHEMAVRVFRRYLKLAP
EETEEYIDYLISIERLDEAAMKLANIVNQDDFVSKHGKSKHQLWNELCDLISKNPTKIKS
LNVDAIIRGGLRRYTDQAGPLWNALADYYVRSGLFERARDIYEEAIQTVTTVRDFSQVFD
AYAQFEELSLKKRMEEAAENPTEDDDIDLELRLARFENLMERRLLLLNSVSLRQNPHNVL
DWHKRVELYEGQPHEIINTYTEAVQTIQPQLAVGKLHSLWVAFAKFYEKNDQISDARTVF
EKAVMVPYLKVDDLASVWCEWAEMEIRHGFYKEALRLMHRATAMPSRKVAYHDESETVQK
RVYKNLKVWSMYADLEESFGTFKTCKAVYDKIIELKIATPQIIINYGLFLEENNYFEEAF
RAYEKGISLFKWPNVFDIWNTYLTKFLKRYGGTKLERTRDLFEQCLEHCPPKHAKALYLL
YAKLEEEHGLARHAMSVYERATGAVLPEERFEMFNIYIKKAADIYGVPKTRQIYEKAIEV
LSEENTREMCLRFAEMEKKLGEVDRARAIYAHCSQICDPRITNNFWQTWKEFEVSHGNED
TMREMLRIKRSVQAMYNTQINMMAAQMLNNQTNDSMDAMKLLDNRASESALANDVIRPSQ
TINFVRGATEGGKSASKVVNPDEIDIDMDVDDEDGEENDNDSEGGEMEEDVPIEKQIIPS
QVFGSLKNEDD
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgctacttgcgaataaaatccaggataaaatggaacctgagcaacactacgtttttcac
aatgaggaggatctactatatgaggaagaaattttgaggaatgcctattcggtaaagcac
tggtggcgttacatagatcatctgagaactacacaaagtccaaatttaaatgttgtatac
gaacgagctctcaaagagttaccaggaagttacaaactatggtacgcttatttgagacat
cgagtaaagcagttggtagggcgtcccattaatgatccactttatgaagttgtaaataat
gcattcgagagagccttggtgtttatgcataaaatgccaagaatatggatggactactgt
acattgatgacggagcaaggctacattactcgaactcgacatatttttgatcgtgctctt
agagctcttccaatcacacaacatcatagaatatggcctttatacatagactttgtaaag
aggcataatgtacatgagatggcagtcagggtattcagaagatatttaaagttggcacca
gaagaaacagaagagtatatagattatctcatttctatagaaaggttggatgaggcagct
atgaaacttgctaacattgtgaatcaggatgattttgtgtccaagcatggaaaatctaaa
caccaattgtggaatgaactttgtgaccttatctctaagaatcctacaaaaataaaatca
ctcaatgtagatgctattattagaggaggtttaaggcgttacacagatcaagctggtcca
ctatggaatgcgttagccgattattacgttcgtagtgggctctttgaaagagcaagagac
atatacgaggaagctatacagactgtgacaactgtcagagatttctcacaagtttttgat
gcttatgcacaatttgaagagctgagtctaaaaaaaagaatggaagaagctgctgaaaat
ccaactgaagatgatgatattgacttagaattgcgcttggcaagatttgaaaatttgatg
gagagaagactgttattgctgaattctgtttcgttgcgacaaaatccacataatgttcta
gattggcataaacgcgtggagctctatgagggtcaaccacacgagattatcaatacgtat
actgaagctgtacaaacaattcaaccacaattagccgttggaaaattgcacagtctgtgg
gtggcattcgcgaagttctatgagaaaaatgaccaaatttcggatgcaagaacggtattc
gaaaaagcggttatggttccctatttaaaagttgatgatttagcttcagtatggtgtgaa
tgggctgaaatggaaatcagacatggcttttacaaagaggctctaagacttatgcaccgc
gcaactgcgatgccgtcaaggaaagttgcttaccacgatgaaagtgaaactgtacaaaag
agagtatataaaaatttgaaagtttggtccatgtatgctgatctagaagaatcttttggt
acattcaagacttgcaaggcggtttatgataaaattatcgaattgaaaatagctactccc
caaatcattataaattatgggttattcttggaagagaataattactttgaagaggcgttt
agagcatatgagaaaggcatttcgctctttaaatggccaaatgtctttgatatttggaat
acttatttaacaaaattcctgaaacgttatggtggaacaaaattggaaagaaccagagat
ctctttgaacaatgtctagagcattgccctccaaaacatgcaaaagctttatacctttta
tacgcaaagctggaagaagaacatggtttggcaagacacgccatgtccgtatatgaaaga
gcaacaggtgctgttttgcctgaagaacgctttgagatgttcaatatttacatcaagaag
gccgccgatatttatggcgttcctaaaacgcgacaaatttacgaaaaagcgattgaggtt
ttgagtgaagaaaatacaagggaaatgtgcttacgatttgcagaaatggaaaagaaatta
ggagaagtggaccgggcgagagccatatatgcccactgcagtcagatatgcgatcctaga
attacaaacaacttttggcaaacatggaaagagtttgaagtgagtcatggtaatgaagat
accatgcgggaaatgctgagaataaaacgaagtgtacaagcaatgtacaacactcaaata
aacatgatggctgcccaaatgttaaataatcaaacgaatgattcaatggatgccatgaaa
cttctagacaaccgagcttctgaaagtgctttagcaaacgatgttattcgtccatcacaa
acgattaactttgtccgtggagctacggaaggaggcaaaagtgcttccaaagtcgttaat
ccagatgaaattgacattgatatggatgttgatgatgaagacggcgaagaaaatgataat
gacagcgaaggtggtgaaatggaagaagatgtaccaattgaaaagcagattattccttct
caagtatttggtagtttaaagaacgaagatgattaa
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