Nasonia vitripennis (jewel wasp): 100120442
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Entry
100120442 CDS
T01081
Name
(RefSeq) 3'-5' RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
nvi
Nasonia vitripennis (jewel wasp)
Brite
KEGG Orthology (KO) [BR:
nvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvi03041
]
100120442
Enzymes [BR:
nvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100120442
Spliceosome [BR:
nvi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100120442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HA2_C
OB_NTP_bind
Helicase_C
R3H
DEAD
Ank_2
nSTAND3
AAA_22
AAA_19
HA2_N
ATPase
Ank
Ank_5
PhoH
ABC_tran
NPHP3_N
AAA_7
AAA_14
NACHT
ATPase_2
Sigma54_activat
SRP54
Motif
Other DBs
NCBI-GeneID:
100120442
NCBI-ProteinID:
XP_031779462
NASONIABASE:
NV17065
UniProt:
A0A7M7Q1K2
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Position
2:complement(19798618..19803743)
Genome browser
AA seq
1154 aa
AA seq
DB search
MPRRKNQRHRDIGEDTRIAVNLTIKKLMETADQKELEFPSSYTAEERAYIHDLARQLGLK
SKSRGRGANRFLTVFKREGSTIVQADAVIKLQKTSRQVIYNLIKKCPLESKERRDLLPPT
ERERTVESEVNTNTKAMGRLNNSIPQVPQLKTNYDVLNFRNSLTVVTKREEILHTLSTNQ
VVIIAGETGCGKTTQIPQFILENCQQKNQTCRIICTQPRRLSAVSVAERVAFERDEKIGQ
TFGYQIRLESRVAPKTLLTYCTNGVLLRTLMGDDSALAMITHIIVDEVHERDRFCDFLLI
ALKDALVKYRSLKVILMSATIDTTIFTKYFNNCPVVSVPGKLFDVDVYYLEDVLKIINYT
TKEMLSKKKELVNSKEQQKVLESWTQYNPPSSGPAKNKERNTIPIPIQKQHNEPVSEKVE
LEPWLIEEMDKSIADAWLSGGEDKFTQILHLIHSENVSVDYQHSKTFVTSLMVAAGRGLL
NTVEQLLNLGANLNLKSCNDWTALDWAKNMKQAECAELIEAYIKTYDCPTSEVELSRAKN
APISEEDKMLLDVYHHTFNDENVDYNLLLTLILHIHLQMPMGSILVFLPGYDDIVTMREK
INGENRMNQGNRYNLYILHSNMQTSDQKRVFRPSPQGTRKIILSTNIAETSITIDDVVYV
IDSGKVKEKSFDAISGVCMLRSNWISQACAKQRKGRAGRCQKGICYRLYSSVRYNSMQLY
QTPEMLRLPLQQLCLYTKHLAPGNTPIAEFLEKAIEPPSNVITRNAVQLLKTIDALDPWE
DLTELGSHLLDLPIEPRLGKMLLYAVVLKCLDPILTIVCSLAYKDPFVIPFQPSKKQAAM
LARKEFASNTYSDHMSVLRAFQIWQNARANGWERAFCEKNFISAAVMEMVVGMRTQLLGQ
LRASGFVKSRGSGDIRDLNSNSENWAVVKAALTAGLYPNLIRVDREHAQLRTQKEVKVFF
HPSSTLRDFSKSLRTTSAQVHAANVNSLPCDWMLYEEMSRSGRFCHARTVTLVNPITVAI
FSGPARLPMDVIYEAECIPESESDSEVDESHEGTTILKLDDWVVFKVDPEAAQLVLHLRQ
KWNALFLRRMKNPNKLMTQQDEQVIKTLVTVITNEEQACGLQQPLGIGQRPRPLLVDYYP
ANARRTEDYEEKNL
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgccgaaaaaaccaacggcatcgggacattggagaagatactagaatagctgtt
aatttgacgataaaaaaattaatggaaactgctgaccaaaaagaattagagtttccttct
tcctatacagctgaagaaagagcttatattcatgatttggcacgtcaattgggccttaaa
tcaaagagcagaggtcgtggtgccaatcgatttctcactgttttcaagagagaaggttct
acgatagttcaagctgatgctgttattaaattgcaaaaaacatctagacaggttatttat
aacttaattaaaaaatgtccccttgaaagcaaggagcgcagagatctattaccaccaaca
gaaagggaacggactgtggaaagtgaagttaatactaacacaaaggcaatgggccgattg
aataatagtataccgcaagtacctcaactaaaaactaattatgatgtactgaatttccgc
aactcattaacagttgtgactaaaagagaagaaattctgcacaccctgagtacaaaccaa
gttgttattatagctggagagactggttgcggtaaaactacacaaattcctcagtttatt
ctagaaaattgccaacaaaaaaatcaaacttgcagaatcatttgtacacagccacgaaga
ctgtctgctgtatcagtggctgaaagggttgcttttgagcgagacgaaaaaattggtcag
acatttggttatcaaataagactagaaagtagagttgctccaaaaactttgttaacatat
tgtactaatggtgttcttttgagaacattaatgggggatgactcagcactagcaatgata
actcacataattgttgatgaagttcatgaacgtgatagattttgtgactttcttcttatt
gcgttgaaagatgctcttgtcaagtacagatctttgaaagtgattctcatgagtgcaacc
attgatacaacaatattcactaaatattttaataactgtccagtagtgagtgtgcctgga
aaattatttgatgtagatgtatattatttagaagatgttttgaaaattattaactacacg
acaaaggagatgttgtcaaaaaagaaagagcttgtaaatagcaaagagcaacaaaaagtt
ttggagtcttggactcagtacaatccaccgtcatctggacctgcaaaaaacaaagagagg
aatactatacctattccaattcagaaacagcataacgaacctgtttcagaaaaggttgaa
ctagagccatggctgatagaagaaatggacaaatctattgctgatgcatggctgtctgga
ggagaagacaagttcactcaaattttacatttgatacattcagaaaatgtttctgtagat
tatcagcattcaaaaacttttgttacttcactaatggttgctgcaggtcgtggattacta
aatacagttgaacaacttctaaatcttggtgcaaatttgaacctgaaatcttgcaatgat
tggactgctttggattgggcaaaaaatatgaaacaagctgaatgtgcagaactaatagaa
gcttacattaagacttacgattgtcctacatcagaggttgaattatcaagagccaagaat
gctcctatttcagaagaagataaaatgctgcttgatgtctatcatcatacattcaatgac
gaaaatgtcgattacaatttgcttctgacattaattctgcacatacacttgcaaatgcct
atgggatctattttggtgtttttgccaggatatgacgatattgttactatgagagaaaaa
atcaatggagaaaatagaatgaatcagggtaatcgctataatttgtatattcttcattcc
aacatgcaaacaagcgatcagaaaagggtattcagacccagcccgcaaggcacacgaaag
ataattctgtctacaaatattgctgaaactagtataacaattgatgacgttgtgtatgtc
attgattcaggtaaagtaaaggaaaagtcatttgatgccatatctggtgtatgtatgctg
cgatcaaattggatatctcaagcttgtgctaaacaacgtaaaggtagagctggtagatgt
caaaaaggcatatgctatcggctttattcttcagttcgatataacagtatgcagttatat
caaacaccagaaatgttgagattgcctttgcagcagctctgtctctatacaaagcattta
gctccaggaaatacacctatagctgaattcttagaaaaagctatagagcctccatccaat
gtgataacaagaaatgcagttcaattgcttaaaaccattgacgctcttgatccttgggaa
gatctcactgagttaggaagtcatttgttggatctgcctatcgaacctcgtttaggaaaa
atgctgctttacgcagttgttctcaagtgtctcgatcctattttaacaatagtctgcagt
ttagcatataaggatccatttgttataccttttcaaccatcgaagaaacaagcagcaatg
ctagcacgcaaagaatttgcatctaatacttattctgatcatatgtcggtactcagagct
tttcaaatttggcagaatgctagagcaaatggatgggaaagagcattctgtgaaaagaat
tttatatcagccgcagttatggaaatggttgttggaatgaggactcaactgctcggccaa
ttgcgagcatctggttttgtgaagtccagaggatctggtgatattagagatttgaattct
aattctgaaaattgggctgttgttaaagcagctttaacagctggattgtatccaaatttg
attcgcgttgatcgagaacatgctcaattaagaacgcagaaagaggtcaaagtttttttc
catccttcatcgactttaagagacttctcaaaatctttgagaacgacttcagctcaagtg
catgctgctaatgtaaattctttgccttgtgattggatgctttatgaagaaatgagtcgc
tctggccgattttgtcatgctagaactgtaaccttggttaatccaatcactgtagcaata
tttagtggaccagctcgattgccaatggatgtaatttatgaagccgaatgtatacctgaa
agtgaatctgattcagaagttgatgaaagtcatgaaggaacgacaatattaaaactcgat
gactgggtagtatttaaagttgatccagaagcagctcaacttgttttacatttaagacaa
aagtggaatgcattatttttacgtcgcatgaaaaatccaaataaacttatgacccaacaa
gatgaacaagttatcaaaactttagtaactgtgattactaatgaagagcaagcatgtgga
ttacagcaaccattgggtataggtcaaagacctagaccattacttgtggactattaccca
gccaatgccagacgtacagaagactatgaagaaaaaaatctttaa
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