Nasonia vitripennis (jewel wasp): 100120859
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Entry
100120859 CDS
T01081
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
nvi
Nasonia vitripennis (jewel wasp)
Brite
KEGG Orthology (KO) [BR:
nvi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nvi04147
]
100120859
00535 Proteoglycans [BR:
nvi00535
]
100120859
00536 Glycosaminoglycan binding proteins [BR:
nvi00536
]
100120859
Exosome [BR:
nvi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100120859
Proteoglycans [BR:
nvi00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
100120859
Glycosaminoglycan binding proteins [BR:
nvi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100120859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
DUF1554
IBIN
Motif
Other DBs
NCBI-GeneID:
100120859
NCBI-ProteinID:
XP_016838930
NASONIABASE:
NV16687
UniProt:
A0A7M7IND7
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Position
3:complement(5004547..5132636)
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AA seq
1181 aa
AA seq
DB search
MSPNFRGSLPPLLLLLLLLLCAAARASQDFFGDKKETEFDLLEAAVSLIDDKNLYLTDGY
DGFMSFGFRPGSEVKQPYRMYLPEKLPSEFTLVASFKPFSAKNSYLFAVLNPFETVVQLG
IRISDGPSTNQNISLIYTNSDMSTVSDEVAKFTVPRLVKRWSKIVIRVTPNEVILYLNCH
EMARQKVTRIPLELVFDTASTLYIAQAGPHIQEKYDGLLQSLKLHLGFPQDLVKCNEDFD
FYSGGDGSGDHELISGSGEIDPDDVPIARGDDEVESEEVKPPPLITPPPPNPNSKEVTKG
EKGDKGEKGESVRGPPGPPGTSYDLNDEEWIAKLPEGPPGPKGDPGDCSCNASALLTSFS
MPKLMHGEKGEPGTPGKEGKQGPLGLTGAAGPPGERGQPGPQGPKGDKGDLGNTGPEGSQ
GEKGEPGRDGAPGEKGAQGPPGPPGKGEFAGYDPSWKPRAIYRTEGYAMRPGLPGQKGDD
GKPGHPGPKGEPGVHGAKGDKGDAGHKGMKGLHGKEGPRGVQGVKGEPGAPGVPGLPGAV
GEVGRTGDKGAKGDMGPEGKTGPAGPPGPPGHGGVSVSDVVGPGRGQKGEPGERGYKGDL
GLKGEKGDKGDFGPAGVPGINGIQGPQGDKGEPGKDGSPGFPGTPGMKGERGERGPPGAT
TIAGTGDYVTIKGEQGAMGPMGKRGRRGRPGPPGNEGPPGPPGPEGPPGKPGINGEIGLP
GWMNNMKGRPGTPGIPGLSGSKGEKGEPGAPSPYGSAHGIKGDKGADGFPGIPGAPGMRG
PPGPAGPPGVPSQGSYIPVPGPPGPPGPPGPPGPGIGKSHIYGERDYYGSRQGLRSSMDE
LKALRELKELKELKEHLGANAAATRGPLETTTKIVPGAVTFQNTEAMTKMSGVSPVGTLA
YIIDEQALLVRVNNGWQYIPLGTLLPITTPAPPTTASPPVNPPFEASNLINQVPVKADGT
SWYPKMLRMAALNEPFTGDMHGVRGADYACYRQAKRAGLKGTFRAFLSSRVQNVDSIVRL
GDRDLPIVNVKGDVLFNSWKEMFNGNGAYFSQNPRIYSFNGKNILSDFTWPQKVVWHGSH
TLGDRAMDTYCDAWHSGSSDRYGLGSPLTGGRLLEQVRYSCDNKFALLCIEVTSEQTKRR
RRRRSLDEDEDEEEEDVDEEDESLLTEAEYAEQLRQLFHAD
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcctaatttcagaggatctttgccgccgctgcttctactgctgctgctgctgcta
tgcgctgccgcgagagccagtcaggatttcttcggagataaaaaggagacggagttcgac
ctgctggaggcggccgtgtcgctgatcgatgacaagaacctctacttgaccgacggctac
gatggcttcatgtctttcggcttccgtccgggatccgaggtcaagcagccctaccggatg
tacctgccggagaagctgccctcggagttcaccctcgtcgcctcgttcaagccgttctcg
gcgaagaacagctacctcttcgccgtactcaaccccttcgagacggtcgttcagcttggc
atccgcatttcggacggcccgtcgacgaaccagaacatatccctgatctacaccaactcg
gacatgtcgacggtctcggacgaagtggccaagttcacggtgccccggctggtaaagcgc
tggtccaagatcgtgattcgggtcactccgaacgaggtcatcctctacctgaactgccac
gagatggctcggcagaaggtcactaggattccgctggagcttgtgttcgatacagccagc
acgctctacatcgcccaggccggacctcacattcaagagaagtacgacggcctcttgcaa
tcgctcaagctacatctgggcttccctcaggacctcgtcaagtgcaacgaagatttcgat
ttctattcaggaggagacggctctggggatcacgagttgatcagcggctcgggagaaatc
gatcccgacgacgtacctatagccagaggcgacgacgaggtcgaaagcgaggaggtgaag
cctccacccctcataacaccgccgccgccaaacccaaacagcaaggaggtaacgaaggga
gaaaaaggcgacaaaggcgagaagggcgagagcgtgagaggtccgccgggaccgcccggc
acaagctacgatcttaacgatgaggaatggatagcaaagttaccagaaggtccacccgga
cccaagggtgacccaggcgactgcagctgcaatgcgtcggccttgctcacctcgttctcg
atgcccaagctgatgcacggagaaaagggcgagcctggaacgcctggaaaagagggaaaa
cagggaccacttggactgacgggcgcggcaggaccaccaggcgaacggggtcagccaggg
cctcaaggcccaaaaggcgacaagggcgacttgggcaacactggtccggaaggttcccaa
ggcgaaaagggcgagcctggccgcgatggagctccaggcgagaaaggggcccaaggccca
ccgggcccacccggaaagggtgaattcgccggttacgaccccagctggaagcctcgagcg
atctacaggacggagggttacgccatgcgtcccggacttccaggacagaagggcgacgac
gggaaacccgggcatccgggtcctaaaggtgagccaggcgtgcacggagccaagggcgac
aagggcgacgctggtcacaagggtatgaagggtttgcacgggaaagagggtcccaggggt
gttcaaggcgtgaagggtgaacctggcgcccctggtgtgcccggtcttcctggagccgtc
ggtgaggtcggccgtaccggtgacaagggggccaagggcgacatgggtcctgagggcaaa
actggacccgcgggaccaccgggaccacctggacatggtggtgtcagcgtcagtgacgtc
gtcggccctggccgaggtcaaaaaggagagcctggcgagcgtggctacaagggcgatctc
ggactcaaaggcgaaaagggcgacaaaggtgacttcgggcccgccggtgtgcccggtatc
aacggcattcaggggcctcaaggcgacaagggagaacccggcaaggacggctcgccaggt
ttcccaggtacgccaggcatgaaaggcgaacgtggtgagaggggcccaccgggtgcaacg
acgatcgcgggcactggagactacgtgactatcaagggtgaacagggagccatgggaccc
atgggtaaacgcggccgcaggggtagacccggtccacccggtaacgagggcccacctggt
ccgccgggccccgaggggccccctggcaaacctggtatcaatggcgagatcggactgccc
ggatggatgaacaacatgaagggtcgacccggcacgcctggaatacccggcctttcagga
tcaaaaggggagaaaggagagcccggagctccaagtccttacggctcggcgcacggcata
aagggcgacaaaggcgcggacggcttcccgggtattcccggggcgccaggcatgcgtggc
cctccgggcccagcgggtccaccgggagtgccctcacagggcagctacataccggtgccc
gggccgcccggtccacctggaccgcctggaccgcctggacctggtatcggcaagagccac
atatacggcgagcgagattactacggctctaggcaaggactgaggagcagcatggacgag
ttgaaagctctgcgagagcttaaagaactgaaggaacttaaggagcatctgggtgctaac
gctgcagcgacaagggggcctttagaaactacaacgaaaattgttccaggagcagtgaca
ttccagaatacagaagcaatgacaaaaatgtcgggtgttagtcctgttggcacactcgct
tatatcatagacgagcaggcgttactagttagagtcaataacggctggcaatatattcca
ctgggaacattgctgccgataaccacgcctgcgccgccgacaactgcatcgccaccagtt
aatccgccattcgaggcttctaatctgatcaaccaggtacccgtaaaggcagacggcact
agctggtatccgaaaatgctgcgaatggcggcgctgaacgagcccttcaccggcgacatg
cacggagttcgcggggccgattacgcctgttaccggcaggccaagcgagccggcttgaaa
ggcactttccgagccttcctcagctcgcgagttcagaacgtcgatagcatcgtcaggctt
ggtgaccgcgatctgcccatcgtcaatgttaagggtgacgttcttttcaattcctggaaa
gaaatgttcaacggcaacggagcctacttctctcagaacccacgaatctacagtttcaac
ggcaagaacatactctcggacttcacatggccacaaaaggtagtctggcacggctcgcac
acccttggcgaccgagcaatggacacgtactgcgacgcttggcattcgggcagttccgac
cgctacggtctcggctcacccctaaccggtggtcgtctcctggaacaggttcgttactcg
tgcgacaacaagttcgccctgctctgcatcgaggtgacgagcgaacagaccaagcgacgt
cgacgtcgacgttccctcgacgaagacgaggacgaggaagaggaggacgtcgacgaggag
gacgagagtctcctgaccgaggctgaatacgccgagcaactgcgccagctttttcacgcc
gattga
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