Nasonia vitripennis (jewel wasp): 100121688
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Entry
100121688 CDS
T01081
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
nvi
Nasonia vitripennis (jewel wasp)
Pathway
nvi03020
RNA polymerase
nvi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nvi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100121688
09124 Replication and repair
03420 Nucleotide excision repair
100121688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvi03021
]
100121688
03400 DNA repair and recombination proteins [BR:
nvi03400
]
100121688
Enzymes [BR:
nvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100121688
Transcription machinery [BR:
nvi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
100121688
DNA repair and recombination proteins [BR:
nvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
100121688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
100121688
NCBI-ProteinID:
XP_031784925
NASONIABASE:
NV11441
UniProt:
A0A7M7QEI8
LinkDB
All DBs
Position
4:2062770..2067398
Genome browser
AA seq
1174 aa
AA seq
DB search
MYAEEDHYEDEDTEEISSKVWQEACWIVINAYFDEKGLVRQQLDSFDEFIEMSVQRIVED
SPQIELQAEAQHTTGEIENPTKHLVKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTYS
APLYVDITKTIEKDGEEPIETQHQKTFIGKIPIMLRSKYCLLAGLSDRDLTELNECPLDP
GGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAFKCEIRSCLEHSSRPTSTLWINMMA
KSGANIKKSAIGQRIVAVLPYIRQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEMV
KPSLDEAFVIQEQNVALNFIGTRGARPGVTKDKRIKYAKEILQKETLPHVGISDFCETKK
AYFLGYMVHRLLSASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYAQK
FIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHLARAGVSQVLNRLTFASTLSH
LRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQPSPI
LEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPDQLMATLRKLRRQMDIIVSEV
SMIRDIRDREIRIYTDAGRISRPLLIVENQTLLLKKRHIDMLKDRDYNNDGWQELVASGV
VEYIDTLEEETVMIAMSPDDLKQEKEYAYCSTYTHCEIHPAMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSIV
AILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSETKKFGDQEEQFEKPSRQTCQGM
RNALYDKLDDDGIIAPGIRVSGDDVVIGKTMTLPENDDELDSTTKRFTKRDASTFLRNSE
TGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFSCEG
LTPDIIINPHAIPSRMTIGHLIECIQGKVSANKGEIGDATPFNDAVNVQKISTLLCEYGY
QLRGNEIMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRAR
DGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLRNNTFECKGC
KNKTQISQVRLPYAAKLLFQELMAMNIAPRLMVT
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgctgaagaggatcactatgaggatgaggacacggaggagatttcgtccaaggtg
tggcaagaagcctgctggattgtcatcaatgcatactttgatgaaaaaggtcttgtccga
cagcaacttgacagtttcgatgaattcattgaaatgtcagttcagagaattgtggaagac
tcgccacaaatcgaactccaagcagaagcccaacataccactggtgaaattgagaacccg
acaaaacacctggtgaaatttgaacagatttacttatctaaacccactcattgggagaaa
gatggtgcaccatcacctatgatgcctaacgaagctaggcttagaaatttgacctactct
gcgccactttatgtggatattacaaagaccattgagaaggatggcgaagaacccatagaa
actcaacatcaaaagacatttattggaaaaattccaatcatgttgagatcaaaatattgt
ctacttgctgggttgtcagatcgtgatttgacagaattgaacgaatgtccgttggatcct
ggtggttatttcattatcaatggttcagaaaaggtcttgatagcacaggagaaaatggcc
acgaatacggtgtacgtattttccatgaaagatggaaaatacgcctttaaatgtgaaatt
agatcatgcttggagcacagttcacgcccaacgtcgacattatggatcaacatgatggcc
aaaagtggagctaacattaaaaagtcggctattggtcaacgtattgtggctgtattgccg
tatatcagacaagaaattcctataatgatcgtatttagagctctcggattcgtagcagat
cgtgatattttggaacacattatttacgatttcgacgacccagagatgatggaaatggta
aaaccatctctggatgaagctttcgttatccaagagcaaaacgttgcattaaactttatt
ggaactcgtggtgcaaggcctggtgtcacaaaagacaagcgtattaaatatgccaaagaa
attttacaaaaagaaactctaccccatgtgggtatcagtgatttttgtgagacaaagaag
gcctacttccttggctacatggtacacagactgctatccgcatctcttggtcgcagagaa
ttggacgatcgtgatcattacggaaataagcgtctcgatctagccggacccctattggct
ttccttttccgtggattattcaagaatttgatgaaagaagtaagaatgtatgctcaaaag
ttcattgatagaggaaaagactttaatcttgagcttgccatcaaaacaaaaatcatcacg
gacggtctaaggtattcgttggcgacgggtaactggggtgaccaaaagaaggctcacttg
gccagagccggagtatctcaggtgttgaacagactgacgttcgcctccacattatctcac
ttgagaagagtcaattcgccgattggtcgtgacggtaaattggccaagcctcgtcagctt
cacaatacactttggggcatgttgtgccctgcggaaaccccggagggagcagccgttggt
ctggtaaagaatttagctctcatggcctacatcagtgtcggttcacagccttcgccaatc
cttgagttcttggaggagtggtctatggaaaatttggaggaaattgcacccagtgctatc
gctgacgctaccaaaatcttcgtcaatggatgttgggtgggaatacacagagatccggat
cagctgatggcgactcttagaaagttgaggcggcagatggacatcattgtctcggaagta
tcgatgatccgagatattcgtgatcgtgaaatcaggatctataccgatgctggaaggatt
agtaggccattgctgattgtcgaaaatcagactttactactcaaaaaacgacacattgat
atgctcaaggaccgagactacaataacgatggatggcaagagctagtcgctagtggtgtc
gttgagtacattgatactctcgaggaggaaacggtaatgatcgccatgtctcccgatgat
ttgaaacaagaaaaggagtatgcttattgttcaacttacacacattgtgaaatccatccc
gccatgattttgggagtatgcgcttctatcatcccattccctgatcataatcagagtccc
aggaatacttatcaaagtgctatgggtaaacaagctatgggtgtctacatcacaaatttc
cacgttcggatggacacacttgcacacgtactgtactatccgcacaagccgctcgtaact
accagatccatggagtacctccgtttcagagagttgccagccggtatcaacagcattgtg
gcaattttatgttacactggttacaaccaggaagacagtgtcatcctgaacgccagcgcc
gtcgaaagaggtttcttcaggtcagttttctaccgttcgtacaaggactcggaaacaaag
aaattcggggatcaggaggaacagttcgaaaagccatcgcgtcaaacgtgccagggcatg
cgcaacgcattgtacgacaaattggacgacgatggtattatcgcgccaggcattcgagtt
tctggagacgacgtcgttattggaaaaaccatgactctacccgaaaacgacgatgagctt
gatagcacgactaaacgattcacaaagcgagacgcctctacattccttcgtaacagtgaa
actggtatcgtggaccaggtcatgctgacgttaaacagcgagggttacaaattctgcaaa
attcgtgtacgcagtgtgcgtataccccagatcggtgacaaatttgcctctaggcacgga
cagaagggtacctgcggtatccagtatcggcaagaagacatgccgttctcctgcgagggt
ctcacgcccgacatcatcatcaaccctcacgccatcccgtcccgtatgacaattggtcac
ttgatcgagtgtattcagggaaaggtttccgcgaacaagggagagatcggtgacgctact
cccttcaacgacgctgtcaacgtgcaaaagatctcgactctcttgtgcgagtacggatac
cagttgagaggcaacgagatcatgtacaacggacacacggggcgcaagatcaacgcccag
gtcttcttggggcctacctactatcagagactcaagcacatggtggacgataagatccac
agcagagcgagaggtcccgtacaaattctcgtgaggcaacctatggagggtagggccagg
gacggaggtttgcgtttcggagagatggagcgcgattgtcagatcagtcacggagccgct
cagttcctgcgagagcgactcttcgaagtttccgatccgtacagaatacacgtgtgcaat
ttctgcggcttgatagccatcgccaatctcagaaacaacacgttcgagtgcaagggatgc
aagaacaagacccagatctcccaagtgaggctgccctacgcggcgaaactcttattccaa
gaactgatggcaatgaatattgcaccccgactcatggttacgtaa
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