Nasonia vitripennis (jewel wasp): 100121761
Help
Entry
100121761 CDS
T01081
Name
(RefSeq) uncharacterized protein LOC100121761 isoform X3
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
nvi
Nasonia vitripennis (jewel wasp)
Pathway
nvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nvi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100121761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvi03021
]
100121761
03019 Messenger RNA biogenesis [BR:
nvi03019
]
100121761
Transcription machinery [BR:
nvi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100121761
Messenger RNA biogenesis [BR:
nvi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
100121761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
Pfc11_Clp1_ID
zf_PCFS4
Pcf11_C
Pcf11_helical
Phg_2220_C
2C_adapt
Motif
Other DBs
NCBI-GeneID:
100121761
NCBI-ProteinID:
XP_008210971
NASONIABASE:
NV16871
UniProt:
A0A7M7H6R9
LinkDB
All DBs
Position
1:15942113..15951489
Genome browser
AA seq
1716 aa
AA seq
DB search
MLSDMNHGRTCKTTEIVEEYVSSLQDLKTNSKPQINLLTILAEDYIEYASAIVEAVEAHL
QKVRSEIKLPVLYLIDSIIKNVNGSYINLFSKNIVQTFCNVFEKVDESTRARMWKLRQTW
SEIFPPNKLSALDVQVHSIDPAWPISSSPSSASAQSKSIIHVNPKFLSMQQKVQQPRRLT
QASPRSSRVATTPKAPVVDTKLISDEQTREERMMREELLKKQKELVALQQKKLQILQEQK
HLEKNRIHVKPDLIAADGTLKKPILTTVPCDTTKSSEKLPSSPVYVPEVPDEPKLISPSI
LPYDPRIKTATALQNGGNAVVSVNPPDDVAPDNQPDLTSSESSSMFTASPVKARPKEIET
FVPRLPDKIESPQASNDNKNTDNERMTQISSNNSSSSQKQATTSDTDSKKHSSKKASSTR
SSSKQRESRRKSSRKSTSSSSPHKKSSKSRKRSLTSERHHHRSHHHHHHHRRHSPKQQQG
LDEEEQFGSLIISPPQPTVNVFKDRRDSVGSTSSSHRTKRSSCRESSSRSRSPESCRDEA
AKRKDSTSSKDEDLRAALIAASTSSSKTPKIDAKEDLDLRVLPMTSNKRQSTEVIQSSSG
KKSKTEENFDDLFGKEDVDLRLLNPALPKVIAAQSIQPPTPSPPMISNDKDSWAKFKTPT
KSLDSSSRSDSFSRSQSDRSTSDRSRDRSSRSKFYNKQSDDRGRRSGGRDYERNADRNIE
IIMKEAAEQLNQGTITKAQYNKLIQDVLHMSEDEKLRAAQRKERESKIWDRSDKGLRMKE
HGMHPRPPGPRWPPPWHQQWAHPPGPFQGHFRPMGSWHPRFCGGPMRPDFHQFHAGFNPR
HPGMSPNVPPILPNGPINPLTGRPMNPLGGPLGPIPPGVIRGDGALLMPNRRSPNSIGDD
GSTWSNSPFSPNIGSTSDGKSMEQEEFSSSSNPNSDELPPADPNVLEEVGKDTTRSINID
DTPREIRYYGHAGVIFMNWDDPRDIGFQNGARRISIDGKDTVVCSFNDDYREFTYEGEVH
KIKLGAPTRELYIDDKWYQVYFGGQAIMVDLGNKKVSVKLDGPPPQVKIGTTKRTDLVLG
KINLIINARSMVPVFLDSKPQIFHIEDRPCTLEFRDALQTVLLNGRPFNVEFGGLPKPIL
IGEKKHFVRFSVLPRGFRAGYVKIAGMKGEQPKETCVTDDTVTGQNQTDIALSSTTNVSL
LIELDATSQDGLDQSYTSKSDLQLDVLSSVVSSAMAPSSGLSYQAEPFENTSVTSTAAVP
LNELFKRLVESGIFSSLSETKKPEEEEKKAPEVLPVAFDKPETLKIKNPAMVATLYSGIQ
CSSCGARFALEIAARYSRHLDWHFRQNRKERDSSRKAHSRLWYYDVSDWIQFEEIEDLED
RAQSWFETEKQTMEIENAAAEDLFAETMQPSVPTGSDEDSCCQVCHESFEQFYNDEKEEW
HLRPAISFEDKNFHPICLEDYKRTLEETATAFDISESSENNKDVDIKDIKSEDAVKEESL
DLKTEDDQLKEGDVIKTEEEKSANTSTVVMEPVESKTELIVSDENNVEQSSQQEEIKDEE
SEFDLSLTVSNELETMFAENSENTTMETETTEEGSKTQDLLESDLAPEEKPMESAVVDST
QVEVKSTIDGNVELESTTSTIPATASKIKINITKSLNSPKESKDEREVVEAMSEEEEEPT
ASLVPASVKPGLQDRNFSVLPPVDKGVELSALCSIM
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atgctatccgatatgaatcacggccgaacctgtaaaacaacagagattgttgaggaatat
gtttcctctctccaggatctcaaaaccaatagcaaacctcaaattaatttgcttacgata
ctagcagaagattatattgaatatgcatcagctatagttgaagcagtagaagcccattta
caaaaggtgcgaagcgagatcaaacttccagtactgtatcttattgattcgataatcaag
aatgtgaatgggtcctatataaatcttttctcaaaaaatattgtgcaaacattttgcaac
gtatttgaaaaggttgatgaaagtacaagagcaagaatgtggaagttgaggcagacatgg
agtgaaattttccctccaaataaattaagtgctttggatgtacaagtgcacagcattgat
ccggcttggccaatatcatcttcaccttcatcagctagtgcacaatcaaaatcaataatc
catgttaaccccaagtttctttcaatgcagcaaaaagtacagcagccaaggcgattaaca
caggcgtcaccgcgatcatcacgagttgccacaacaccaaaagcaccagtagttgatact
aaattaatttcagatgagcagacaagggaagagcggatgatgagagaagagctcttgaaa
aaacaaaaagagttagttgcactacaacagaagaagctgcagatattgcaagaacagaaa
catttagaaaaaaatcgaatccacgtgaaacctgatttgattgctgctgacggcacctta
aagaaaccaatattgaccacagtgccttgtgatacaacaaaatcatcagaaaaattgcca
tcaagtcctgtgtatgtaccagaagttccagacgagccaaagcttatttccccaagtatt
ctgccctatgatcctagaataaaaactgcgacagctttacagaatggcggaaatgccgtt
gttagcgttaatccacccgatgatgttgctccggataatcaaccggatctcactagcagc
gaaagctcatcgatgtttaccgcaagtcctgtgaaagctcgaccgaaagaaatcgaaaca
ttcgttcctcgtcttcccgataagatcgaaagccctcaagcttctaacgacaataagaat
acagataatgagagaatgacccaaatatctagtaataatagcagtagtagccaaaaacaa
gcaacgacaagtgacactgattcgaaaaaacattcgtctaagaaagcttcatctacacga
tcttcttcaaagcagcgagagagccggagaaaatcttcgcgtaaatctacttcctcgtct
tctccgcacaagaagtcatctaaatctcgtaaacgaagtctcaccagcgaacgtcatcat
catcgttctcatcatcatcatcatcatcatcgtcgacactcgccaaagcaacagcaaggc
ctcgacgaggaggagcagttcggctcgctgataatctcgccaccacaacccacggttaac
gtgttcaaagataggagagacagtgttgggagtaccagcagttcacatagaaccaagaga
tcatcgtgcagagaaagtagtagtcgaagtagaagtccagaaagttgtagagatgaggca
gcgaaaagaaaagatagtactagtagcaaggatgaggatctcagagcagcgttgattgcg
gccagtacgagtagcagtaaaacgccaaaaattgacgcaaaagaagatttagacttacgc
gttcttcccatgacaagcaacaagcgccagtcaacagaagttattcaaagttcaagcgga
aaaaaaagtaaaacagaagaaaactttgatgatctattcggcaaagaagacgtggacctt
cgtcttctaaatccggctttaccgaaggtgatcgctgcgcaaagcatacagccaccaaca
ccatcgcctccaatgatctccaacgataaagacagctgggctaagttcaaaacgccgact
aaatctttagatagtagttcccgatctgactccttcagtcgatctcaaagcgatagatca
acatcagaccgcagccgtgatcgatccagtcgcagtaaattttacaacaaacaatctgac
gatcggggaagacgcagtggtggaagagattatgaacgcaatgccgatagaaacatagaa
atcattatgaaagaggcagctgaacagctaaatcaagggaccatcactaaggcgcagtat
aataaattgatacaagatgtgttgcacatgagcgaggacgaaaaactgagagctgctcaa
agaaaggagagagaaagtaaaatatgggatagaagtgataagggcctaagaatgaaagag
catggcatgcatcctcgaccacctggtccaaggtggccgccgccctggcatcagcaatgg
gctcatccaccgggtccgttccaaggacatttccggccaatgggttcctggcacccgcga
ttttgcggtggacccatgcgcccagattttcatcaatttcatgcaggctttaatccacgt
catcctggtatgagtccgaacgtacctcctattttgccaaacggaccaataaatccattg
actggtagacctatgaatccactgggtgggccattaggtcctatcccacctggtgtaata
cgaggagatggtgcactccttatgccaaacagacgctcaccgaattctattggggatgat
ggctcaacgtggtcgaattcgccttttagccctaatattggaagtactagtgatggaaag
tcgatggaacaggaagaattcagttcaagcagtaatcctaatagtgatgaactaccaccg
gcagatcctaatgttttagaagaggtaggaaaggataccacgagatcaatcaacatagac
gatacaccaagggagatcaggtattacggacacgctggcgtcatctttatgaactgggac
gatccgagagatattggattccaaaacggcgcaagaaggatttccatagatggcaaagat
acagttgtttgttcatttaatgacgattatcgcgaatttacctacgaaggagaagttcat
aaaataaagcttggtgcacctacgcgagaattatacattgatgacaaatggtatcaagtt
tactttggcggtcaagcaatcatggttgatctgggaaacaagaaagttagtgtcaaatta
gatggaccgcctcctcaagtcaagataggaactaccaagcgcacagatctcgttttagga
aaaatcaacctcatcatcaatgctagaagtatggttccagtattccttgattccaagccc
caaatttttcatatcgaggatagaccttgtactttggagtttcgcgatgctctgcaaacg
gtcctgttaaacggcagaccattcaacgtcgaatttggtggtctacccaagcccattctc
attggggagaaaaagcattttgtgcgattctcggtattaccacgtggttttcgggctggt
tatgttaaaattgctgggatgaagggtgaacagcctaaggaaacttgtgttactgatgat
acagtgaccggacaaaatcagaccgacatagctttaagtagtactacgaatgtgtcattg
ctgatcgaattagatgctacttctcaagatggcttggatcaatcatatacatcgaaatca
gatttacaactggacgtgctgtcttcggtggtatcctcggcgatggcaccctcatcagga
ctatcgtatcaagccgaaccttttgaaaacactagtgtcacttccactgcagccgtgccg
ctaaatgagcttttcaaaagattagtcgaatctggaatattctcaagcctgagtgaaacg
aaaaaaccagaggaggaagagaagaaagccccagaggttcttccagtcgcattcgacaaa
ccagaaacattaaaaataaaaaatccagccatggtcgctactctttatagtggtattcag
tgcagttcttgtggagctagatttgcgctggaaatagcagctcgttatagtcgccactta
gactggcacttcagacagaatcgaaaagaacgagactcatctagaaaagcgcattcaaga
ctttggtattacgatgtcagtgattggatacagtttgaagaaatcgaagatcttgaggat
agagcacaaagttggtttgaaacagaaaaacaaactatggagatcgaaaatgcggcggca
gaggatctctttgctgaaacgatgcaaccaagcgtacccacaggctcagacgaagactcc
tgctgccaagtatgccacgaatcttttgaacaattttacaacgatgaaaaggaagaatgg
cacttgagaccggctatttcttttgaggacaaaaattttcatcctatctgtctagaagac
tataaacggactttggaagagacagcaacggctttcgatatatctgaatcaagtgaaaat
aacaaagatgtcgatattaaggatattaaaagtgaggacgctgtaaaagaagaaagttta
gatttaaaaactgaagatgatcaattaaaagaaggagatgtaattaaaacggaagaagaa
aaatcagcaaatacttcaactgtagtaatggaaccagtcgaatcaaaaacagaattaatt
gtatcagatgaaaataacgttgagcaatcatctcagcaagaagaaataaaagacgaagaa
agtgaattcgatttatcacttacggtatcaaatgaattggaaactatgtttgcggaaaat
tctgaaaatacaactatggaaacggaaacaacggaggaaggtagtaaaactcaagatctt
ctagaatcagacctagcaccagaagaaaaacctatggaatctgccgtcgttgattcgact
caagttgaggtaaaaagtacaattgatgggaatgttgagttagaatctactacatcaacg
ataccagctactgcatcaaagatcaaaataaatattacaaaatcactcaattcgccaaaa
gaatctaaagatgaaagggaagttgtagaagcaatgtcggaagaagaagaagagcctacc
gcatctttggtaccagcatcagtaaaacctggtttacaagaccgaaatttttcggtccta
ccgccagtcgacaagggtgttgaactttctgcgttatgttcgattatgtaa
DBGET
integrated database retrieval system
