Entry |
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Name |
(RefSeq) DNA polymerase delta catalytic subunit
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KO |
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Organism |
nvi Nasonia vitripennis (jewel wasp)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:nvi00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100122758
03410 Base excision repair
100122758
03420 Nucleotide excision repair
100122758
03430 Mismatch repair
100122758
03440 Homologous recombination
100122758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:nvi03032]
100122758
03400 DNA repair and recombination proteins [BR:nvi03400]
100122758
Enzymes [BR:nvi01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
100122758
DNA replication proteins [BR:nvi03032]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
100122758
DNA repair and recombination proteins [BR:nvi03400]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
100122758
MMR (mismatch excision repair)
DNA polymerase delta complex
100122758
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
3:24558418..24563311
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AA seq |
1086 aa
MSKRSYSSPAVNKKTKNDEEPSTFESELAAMDDIEDEFFNEGTQIFGQGPEQENTSSKWS
RPDPPALDPSKDTLCFQQIDVDHYTDKPMPGMPGSRIGPVPVMRMYGVTEQGNSVCCHVH
GFSPYFFVSAHPSFNNSHCKSFKEALNAAVKNDMKNNNDNIQDFILAVEIVERQTVYGYT
GEKKSQFLKITVALPRLIAPCKRLLETQVVFPTLDHKYTAYESNIDFDIRFMADTHMVGC
SWIELKPGKWKLRGKHNHNMAQITRCQLECDVAWDQFVAHAPEGEWSKVAPFRILSFDIE
CAGRKGIFPEPEHDPVIQIANMVILQGESEPFLRNIFTLDTCAPIVGCQVLSFEKESSML
EKWADFIRQLDPDIFTGYNINNFDFPYLINRAQHLHVRDFNYLGRIKNIRSVIKNQVLQS
KQMGRRENKFVNFEGRVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSIISDLQ
NGNAQTRRRLAVYCLKDAYLPLRLLDKLMCIIIYMEMARVTGVSLSSLLTRGQQIKVVSQ
LLRKTIERGYLIPVHHGQGSDEQYEGATVIEPLRGYYNDPIATLDFSSLYPSIIMAHNIC
YTTLLSPSAQNHYNLSNDDITRTPANSNFVKGSVRKGILPEILEQLLSARKAAKADLKKE
TDPLKQKVLDGRQYALKVSANSVYGFTGAQQGKLPCLEISGSVTAYGRTMIEKTKQEVET
HYRKENGYDHDAVVIYGDTDSVMVKFGVKKIEDAMKLGKEAAEYVTSKFIKPIKLEFEKV
YFPYLLINKKRYAGLYFTKPDKYDKMDCKGLETVRRDNCPLVANMMNTCLQKLLIDRNPD
DAMDYAKQIISDLLCNRIDISQLVVTKELTKTDYTAKQAHVELAAKMKKRDAGTAPKLGD
RIPYVFISGPKGVPAYQKAEDPIYVLENNIPIDTNYYLENQLSKPLVRIFEPILGDKAES
LLLKGEHTRTKSVATSKVGALVAFTRKKEACLGCKAVLAADREGKALCQYCEEKEGQILQ
NEIYNGRKLEEKFCRLWAECQRCQGSLHQEVICTSRDCPIFYMRKKVQMDLDTQAKRIEK
FGIPQW |
NT seq |
3261 nt +upstreamnt +downstreamnt
atgagtaaacgatcgtactcgtccccagcagtcaacaaaaaaaccaaaaacgatgaggaa
ccatccacattcgagtctgagctcgctgcgatggatgacattgaagatgaatttttcaac
gaagggacgcaaatttttggacaaggcccagagcaagaaaacacatcttcgaaatggagc
agaccggatccacctgctttggacccatcaaaggatactttgtgttttcaacagattgat
gttgatcattacacagacaagccaatgccaggcatgcctggaagtcgaataggaccagta
ccagtaatgagaatgtatggagtcacggagcagggaaattctgtttgttgtcatgtacat
ggtttcagtccgtacttctttgtatcagcacatccatcatttaataattcgcattgtaaa
tcattcaaggaagcactaaacgctgcggtaaaaaatgatatgaagaacaacaatgacaat
attcaagactttattttggcagttgaaatagttgaacgtcaaacagtgtatggttatacc
ggagagaaaaagtctcaatttttgaaaataacagttgctttgccaagattaattgctcct
tgtaaaagattactagaaactcaggttgtgtttcctactcttgatcataaatatacagct
tatgaaagtaatattgattttgatataagattcatggctgatactcatatggtaggatgt
tcatggatagaactaaagccaggaaaatggaagttaagaggaaagcataatcataacatg
gcccagatcactagatgtcaattggaatgtgatgtagcttgggatcaatttgttgctcat
gctcctgaaggagaatggtctaaggtcgcaccatttagaattcttagttttgatattgaa
tgcgctggtcgcaaaggaattttcccggaacctgagcatgatcccgttattcaaatagct
aatatggtaattttgcaaggagaaagtgaaccatttttaagaaatatcttcaccttggac
acatgtgcaccaatagttggatgtcaagtattaagtttcgaaaaagaaagttcaatgtta
gagaaatgggctgatttcatacgtcaactggatcccgacatatttaccggatacaacatc
aataatttcgatttcccgtacttgatcaatcgcgcgcaacacttacacgttagggacttc
aattatttaggtcgaataaaaaatataagatctgtgataaaaaatcaagtacttcagagc
aaacagatgggcaggagagaaaacaaatttgttaactttgaaggacgtgtgccttttgat
ctgttactggtcttagttagagattacaaactgcggtcttatactttaaacgccgtgagt
taccatttccttcaagaacaaaaggaagatgttcaccatagcatcatctctgatttgcaa
aatgggaatgctcaaacgaggcggcgtctcgctgtatactgcttaaaagatgcataccta
cctcttagattgttagacaaacttatgtgtattattatttatatggaaatggccagagtg
acaggtgtatccctctctagtctacttacaagaggtcaacagattaaggtagtttcacaa
ctgttacgaaagacgatcgagaggggctacctcatacctgttcatcatggtcaaggatca
gatgaacaatacgaaggagctacagtcatcgagccgctccgtgggtactataatgatccc
attgccacattggatttcagttctctataccccagtatcataatggcccacaacatctgt
tatacaactctcttgagtccaagtgcccaaaatcactacaatctctcaaatgacgatata
accagaactcctgcaaactctaatttcgttaaaggcagtgtcagaaaaggcatactgccg
gaaattttggagcaattgctttccgctagaaaagcagcaaaagcggacttgaaaaaggaa
acggatcctttgaagcaaaaagtgctcgatggccgtcagtacgctttaaaagtttctgcc
aattccgtttatggttttactggcgcccagcaaggaaaattgccttgtctcgaaatatcc
ggaagtgtcactgcttacggtcgtacaatgatcgaaaaaacaaaacaagaagtcgaaacg
cattatagaaaagaaaacggctacgatcatgacgcagttgtaatttacggtgatactgat
tcggtcatggttaaatttggagtcaaaaaaatcgaagatgctatgaagcttggaaaggaa
gccgctgaatacgtaacatcgaaattcatcaaacctatcaaattagagtttgaaaaggtg
tatttcccatatcttctcatcaacaaaaaacgttatgctggtttgtactttactaagccg
gacaaatacgacaaaatggattgcaaaggtttggagactgtgagaagagataactgtccg
ttggttgcgaacatgatgaacacctgccttcaaaaattactcattgacaggaacccagat
gacgcgatggactatgcaaaacaaataatcagcgatctcctgtgcaatcgcatcgacatc
tctcaactggttgtcacgaaagaattgacaaaaaccgattacacggcgaaacaagctcac
gtagagttggctgcgaaaatgaagaagcgtgacgctggtacagctccgaaactaggtgac
cgaatcccttacgtgttcataagcggacctaaaggtgttccagcttaccaaaaagccgaa
gatcccatctacgtcttggagaacaatatacccatcgacacgaattactatctcgaaaat
cagttgtcgaagccgctcgttagaattttcgagcctatactcggggacaaggcggaatct
ctattgctgaagggagaacacacgcgaacgaagtctgtggccacatccaaagtaggtgca
ctcgtggctttcacgcgtaaaaaggaggcatgtctgggatgcaaagctgtcttagcggcc
gatagggaggggaaagcactctgtcagtattgcgaggaaaaggaaggccaaattctacag
aatgaaatttacaacggacggaaactggaggagaagttttgcagactgtgggctgagtgt
cagcgttgtcagggtagtcttcatcaagaagtcatttgcacgagtcgagattgtccaatc
ttttacatgagaaagaaagtgcaaatggatctggatacacaggcaaagcgaatcgagaag
tttgggattcctcagtggtga |