Nasonia vitripennis (jewel wasp): 100122941
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Entry
100122941 CDS
T01081
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
KO
K12857
Prp8 binding protein
Organism
nvi
Nasonia vitripennis (jewel wasp)
Pathway
nvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100122941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvi03041
]
100122941
Spliceosome [BR:
nvi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
100122941
Complex C
U5 SnRNP specific factors
100122941
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_SPT8
NBCH_WD40
ANAPC4_WD40
Beta-prop_DCAF4
eIF2A
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_WDR75_2nd
Beta-prop_RIG_2nd
Beta-prop_Vps41
Nbas_N
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
100122941
NCBI-ProteinID:
XP_031788134
NASONIABASE:
NV12322
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Position
5:complement(6572154..6574212)
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AA seq
350 aa
AA seq
DB search
MPILDKRKGDDILSLVPASKKTKNEVVFSSREKAVVQSGPPRTSSLMSPIMLLEGHGGDI
FSLEFHPEGQYLASTGFDRQIFIWNVYGECENISVMTGHSGAIMELHFSPDGSTLYTAST
DMTLGLWDLIAGTRIKKLKGHTSFVNSVNGARRGLTQLCSGSDDSTIRIWDPRKKGQCFS
LNNTYQVTAVTFNDTAEQVISGGIDNDIKVWDLRKNAILYKMKGHTDSVTGLSLSPDGSY
ILSNSMDNSLRIWDIRPFAPYERCVKVLSGHQHTFEQNLLRCAWSADGSLVSAGSSDRFH
YIWDTTSRRILYKLPGHNGSVNDVDFHPKEPIVCSGSSDKQIYMGEIDAQ
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcctattttggataagagaaaaggcgacgacattctgtcgctcgtcccagcatcgaag
aaaaccaaaaatgaagtcgtatttagcagcagagaaaaagctgtggtgcaaagtggccca
ccaagaacatcctcgcttatgtctccgatcatgttgctggagggacatgggggggatatt
ttttcactggagtttcatccagaaggacaatatcttgcatccacaggttttgatcgacaa
atttttatttggaatgtctatggagagtgtgaaaatatttctgttatgactggccacagt
ggagctattatggagctgcatttcagtccagatggaagtactttgtatactgcaagcaca
gatatgactctaggcttgtgggatttaattgctggaacaaggataaaaaagctaaagggg
catacctcttttgtcaactctgttaacggagctaggagaggtttaactcagctatgctct
ggcagtgacgacagcacaattcgaatttgggatcccaggaagaagggccaatgtttttct
ctaaataacacttaccaggtaactgcagtaacatttaatgatacagctgagcaagtaata
agtggagggattgacaatgacataaaagtgtgggatttacgaaaaaacgctattttgtac
aaaatgaaaggtcatactgattcagtcacaggattgagtctcagtccggatggctcctat
atattgtcaaattctatggataacagtttgaggatatgggatattagaccatttgcacct
tacgaaagatgtgtaaaagttttgtctggtcaccaacatacttttgagcaaaatttgcta
agatgcgcttggtctgctgatggtagcttagtctcagcaggttcatcagatagattccat
tatatatgggacacaacaagcagacgaattttgtataaattgcctggacacaatggatct
gttaatgatgttgattttcatccaaaggaaccaattgtgtgctctggttcaagtgacaaa
caaatctacatgggtgaaatagatgctcaataa
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