Nicrophorus vespilloides (burying beetle): 108556687
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Entry
108556687 CDS
T04922
Name
(RefSeq) LOW QUALITY PROTEIN: probable ribonuclease ZC3H12D
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvl03019
]
108556687
Messenger RNA biogenesis [BR:
nvl03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
108556687
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH_2
zf-CCCH
RuvA_C
Lipoprotein_21
UBA_N4BP1_C
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
108556687
NCBI-ProteinID:
XP_017768383
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MSSSSNSNNTVRIKTICAPFLKDNYQRISVLFSALLNETKCGDGFSIFEVQCTTPLAPDR
SYSSDFISRLQKYVDDICKEGCGVGGEDSSYDSDYEADTPGAAPAKHHQDVSRTTSDTLA
AEYADYVQTDSNPGYTARVEFALKLGYTEKLVQAALQKLGPTPTQNELLRELIKLGAQRG
TSSCDNSPTDTLSPLXGGGGIISSQSEPSPSLRSVVIDGSNVAMSHGNKEIFSCRGIRIC
VDWFKARGHKDITVFVPTWRKESPRPDNPIQDREILAELEKERQLVFTPSRFVGGRRMVC
YDDRYVLKLASEVDGIVVSNDNYRDLCQESTEFRRVIEERILMYSFVNDRFMPPDDPLGR
SGPTLDNFLRTQPKKSEPPPLCPYGKKCTYGNKCKYNHPERGPLPHKSVTERLSEHAQRH
LQAREGETRKLPLGRTRSHIPQHKEPQHTIVSKSRSVDNVGENLHRKLQRQLTLNPSADP
RLANVRKQFKPAMPNWEMHQNVTRIVSAPDSNRPWPPQVPMRHMQRVSSCSDPQLNNWHQ
WQSNPQEDARRKLHYHLAAIFPEEQVSQVMQLYPEETNPQKICAAILAMFPKQ
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagcagcaatagcaacaacacggtgcgcataaagacgatctgtgccccgttc
ctgaaggacaactaccagaggatctccgtcctcttctccgctcttctgaacgagacgaaa
tgcggcgacggattctccatcttcgaggtgcagtgcacgaccccgctggcccctgaccgc
agctacagctcggactttatcagcagactccagaaatatgtagatgatatatgcaaggag
ggctgcggcgtcggaggcgaggattcgagctacgactcggactacgaggccgatacaccc
ggagcggcaccggccaaacaccaccaggacgtttcaaggacaacgagcgacaccctcgcc
gccgaatatgcggactacgtgcaaaccgattccaatcccggctacacggccagagtggag
tttgcgctcaagctcgggtacaccgagaaactggtgcaggccgccctccagaagctgggt
ccgacaccgacgcagaacgagctcctccgcgagctgatcaagttgggcgcgcagaggggc
acctccagctgcgacaacagccccacggacacgctatcacctcttnncggcggaggtgga
atcatctcgtcacaatcagaaccttctccgtccctgcggtccgtcgtcatcgatgggagc
aacgtggccatgagtcatggtaacaaagagatattctcgtgcagaggaatcaggatctgc
gtggattggttcaaggcgcgcggccataaagacataacagtattcgtgccgacatggcgc
aaagagtctcctagaccggacaacccgattcaagacagggagatcctcgccgagctggag
aaggagcgccagctggtgttcacgccctcgaggtttgtcggaggccgaaggatggtctgc
tatgatgacagatacgtcttgaagttggcctcggaggtagacggcatcgttgtcagcaac
gacaactacagggacctctgccaggagtccaccgagttccggagggtcatcgaggagcgc
atcctaatgtactccttcgtgaacgaccgtttcatgccgccggatgatcccctcggtcga
tccggtccgacgttggacaacttcctgcggacgcagccgaagaaaagtgaaccaccacct
ttgtgtccgtacggaaagaagtgcacgtacgggaacaagtgcaagtacaaccatccggaa
cgcggacccctcccgcacaagtctgtgacggaacggttatcggaacacgcgcagcgtcat
cttcaagccagagagggtgagactagaaaacttcctctgggtcgcaccaggtcgcacatc
ccgcagcacaaagaaccccagcacacgatcgtgtccaagagcaggagcgtggacaacgtc
ggcgagaatctccacaggaagctccagcggcagttaacactgaatccatccgcggatcca
agactggcgaacgtcaggaagcagttcaaacctgcgatgcccaactgggagatgcaccag
aacgttaccaggatagtatcggcgccagacagcaatcggccgtggccgccgcaggtaccg
atgcggcacatgcagagggtctccagctgctcggatccccaactgaacaactggcaccag
tggcagagcaatccgcaggaggatgcgcgcaggaaactgcactaccaccttgccgccatc
ttccccgaagaacaggtatcgcaggtgatgcaactgtacccggaggagacgaatccgcag
aagatctgcgccgcaatcctggcgatgttccccaagcagtga
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