Nicrophorus vespilloides (burying beetle): 108556704
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Entry
108556704 CDS
T04922
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108556704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvl03021
]
108556704
03036 Chromosome and associated proteins [BR:
nvl03036
]
108556704
Transcription machinery [BR:
nvl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108556704
Coactivators
SAGA/TFTC/STAGA complex
108556704
Chromosome and associated proteins [BR:
nvl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
108556704
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
DUF416
Motif
Other DBs
NCBI-GeneID:
108556704
NCBI-ProteinID:
XP_017768437
LinkDB
All DBs
Position
Unknown
AA seq
869 aa
AA seq
DB search
MASVKFLEEALSTDVDESAVSAIVGSLENQLVTSAPAAPNQAGNATVLNQNHINSAISNG
GTIPSQKHGAIANGDTINSITGVTTAQVATGTLNNATYNTTVNNSDGNKSTEPVNIVYSQ
GSQAMTSTGTIISNRVSFPAAQNVQNGTIGLSQLAPQTVLQTSSTSNVQTIQAKQPTLVI
KTSAAGGSAQGLVTVPMNVTTNVSQVNNVGSTTTQPPNILSNLQVLNVRPGVPAQPQKGQ
PARVVLSAPQLVGARPGTPQLTLQSLQGLQPGQQGHLLLKTENGQYQLLRVGPAPTGGVS
IAGTTGGQPVSFRMQTVPAQSAAAAAAATTTPATISTTGATQQVTAAAPTVVNTTPVQRP
ANDNTKEKCRKFLANLLELSSREPKSVEKNVRMLIQDLIDAKVEPEDFCDRLERLLNASP
QPCLIGFLKKSLPLLRQSLATKELTIEGIRPPPTNVVYSLASGTPTIQTQVRPALAASQV
RLVAPGTTVVRPGLVQQRVVTPLRGAIQQTRMLTTIRQPNANQQVIVSSSQPPALHPVFP
SNQVMRTASGLNIVRQPIQVKAGTLTQTRPQMQIRTTYPVVTKNLVTNIKMTGTKPVVPS
NISKLATKDKEKKTFSSAYTGDDDINDVAAMGGVNLAEETQRILGSTEFVGTQIRSCKEE
FFLNMNALQHRIRLAVAKHGLDEPSNEVAAVISHAAQERVKNLVEKLAIITEHRLEMVKS
DPRYEVTSDIKGQLKFLEELDRAERKRHEEMEREMLLRAAKSRSKTEDPEQAKLKAKAKE
MQRVEMEELRQREANATALQAIGPRKKPRLDGDAGVGTSQANTVFNSGARGQLPLKQRMK
KVTLRDLQFLFETEKDLCKSTLLYKSYLK
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagttaagtttctcgaggaagctctcagtacagatgttgatgaatctgctgta
agtgcaatcgtcgggtcgttggagaaccagctcgtaacttccgcccctgccgcccccaat
caggccggcaatgcgacggtcctcaaccaaaaccacataaatagtgcaatatcaaacggc
gggacaattccctctcagaaacatggggccatagctaacggtgacacgataaatagtatc
acaggtgtaacgacggcgcaggtagccacaggaacattgaacaacgcaacttacaatacg
acagtcaacaattcagatggcaataagtctacggagccggttaacattgtctattcccag
ggaagccaagcgatgacaagcacaggcacaatcatctcgaatcgtgtctcgttccctgct
gcacagaacgtccagaatgggacgatcggtctgtcgcagctcgcgccacagaccgtcctc
cagacgtcgtccacgtcgaacgtacagacgatacaggctaagcagcccacccttgtgata
aagactagtgctgctggtggtagtgcacagggtttagttacagtgcccatgaatgtgaca
acaaatgtgtcgcaggtcaataatgtaggtagcacaaccacacaaccccccaatatcctg
tccaatctccaggtacttaatgtgcgccccggggtccccgcacaaccacagaaaggccaa
ccggcacgggttgtgctcagtgcaccacagttagttggggccaggcctggaacaccccaa
ttaacattacaaagtttgcaaggattgcaacctggacagcaaggacacttactgttaaag
actgaaaatggtcaataccaattgctacgagtcggacctgctcccacaggtggagtcagc
attgctgggactactggtggtcaaccagtttcgtttcgaatgcaaacagtacctgctcaa
tcggcggcggcagcggcggcggcaacgacaacacccgcaacgatttcaacaacaggtgcc
acacaacaagttactgcggcggcaccaactgttgttaatacaacaccagttcagagaccg
gctaatgataataccaaagaaaagtgtcgcaagttcctagctaatttactggagttgtcc
agtcgagagccgaaatctgtcgagaagaatgtgcggatgttaattcaggatttgatcgac
gcgaaagtggagcccgaggatttctgcgaccgactagaaagactgctcaacgcatcccca
caaccgtgcctaattggatttctaaaaaaaagtctgccgttattgcgacagtctttagcc
acaaaagaattaaccatagaaggaatccgtcctccacccacaaatgtggtttactcgcta
gctagtggaacgccgacgatccagacgcaagtcaggcctgccttagccgcgtcccaggtg
aggttggtagcacccggcacgacggtcgtgagaccaggtctggttcagcagagggtcgtg
actcctctcaggggtgcaatccagcaaacgagaatgttgacgacgatacgacaaccgaat
gcgaatcaacaagtaatagtgtcgagctcacaaccacctgccttacatcccgtattccct
agtaaccaagtaatgagaactgcctccggattgaacattgtccggcagccgatacaggtg
aaggccggtactctgactcagacgaggccgcagatgcaaatccgcaccacctatccagtg
gtcacgaaaaacttggtaacgaacattaagatgaccggaacgaaacccgtagtgccttcg
aatatttctaaattagcaaccaaagacaaagagaagaaaacattttcctctgcgtacact
ggcgacgacgatattaacgatgtggccgctatgggcggagttaacttggccgaggaaacg
caacggattttgggttcgacggaatttgtcggtacacaaatccggtcttgcaaggaagag
ttctttttaaacatgaatgcgcttcagcataggatacggttggccgttgccaaacacggc
ctcgacgagcccagcaacgaagtcgccgccgtcatctcgcatgcagcgcaggaacgtgtt
aagaaccttgtcgaaaaattggcaatcattactgagcatcgattggaaatggttaaaagt
gatcctcggtatgaagtcacctcagatatcaaaggtcagttgaaatttttggaagaattg
gaccgagcggagagaaaacgtcacgaagagatggagagagagatgcttttgagggcagcg
aagagccgttcgaaaactgaggatcctgaacaagcaaaactgaaagcaaaggcgaaggaa
atgcagagagtggaaatggaggaattgcgccagcgagaagctaatgccactgccctgcaa
gccataggtcccaggaaaaaaccaagattagatggagatgccggagtcggtacttctcag
gcaaatactgttttcaatagcggtgctagaggtcagttgccattaaaacagcgtatgaag
aaggtaacacttagggacttgcagttcttgtttgaaactgagaaggatctgtgtaaaagt
acgctgttatataagtcatatcttaagtga
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