Nicrophorus vespilloides (burying beetle): 108556725
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Entry
108556725 CDS
T04922
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvl03019
]
108556725
Messenger RNA biogenesis [BR:
nvl03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
108556725
3'-5' decay
Other 3'-5' decay factors
108556725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
AAA_30
AAA_19
UvrD-helicase
ResIII
PhoH
PAM2
AAA_22
zf-C2H2_jaz
AAA_14
zf-C2H2
zf-C2H2_2
AAA_7
T_hemolysin
AAA_16
Motif
Other DBs
NCBI-GeneID:
108556725
NCBI-ProteinID:
XP_017768423
LinkDB
All DBs
Position
Unknown
AA seq
1491 aa
AA seq
DB search
MNVSVSENFARGSGKKWSSLMEARAFEYLAAKDWLKAIEILNELLALKYLNKSQIITFLF
ARTDCFRGLGHNEAVITDCRRLLQYIDNGDLQGGSKTRVRLIIALMYSQRFAEAELAIQE
WVSFHIGPNQKEASKFLEHLHNEIQVNGCNSIESELAAYEQKLKTFRMDKTDQSGFVCTY
CSLMFKDKADLRAHCQTDIHQRIIMSDEGRDWKWRPPPRGSSMETYRLCDSFSETGQCRY
GLQCVEAHGTDELHEWRERMNYRRMRLQRAYETEMYGKSYTEEFIEKLIQTTAPDKVMRD
SIPEVNDLCSSKLSISISAKNVNHVWMFKLVANNCDLKATALLMDAHRTYFRIIRLQYAV
GDDWKDIDILPNGQEWILKSENRPFGESPTYRVAVAFCADIYGTFRQSIVFDFGTQPVLV
KHLCVDVIPLTDMEKINEIRKEVLLSSSERWNSANSDIVNFSSELVALVPSYGNTECEWA
KTLASSYPCPQSDTFVFSQATIMEKRLTQNNYRSRMHELLYVEEMARYEHIARYNVNTKL
MIIHSYLLCPNSTASSTAKYSSCGELFALMHLGKDLSEDTSAGRLILNNCTTILLSPDPP
DAQGKVYEALIEDKGKTMIYLRLSAKMVSALGLEADQDVKFNVQFQLNRIPYCEWHYAID
KIPDFKLIFPDTYLEPNIPWTPSRQWSSTLDPRLNLKQKEAIVAITTPLCVHLPPVLIIG
PFGTGKTFTLAQAIKQLVSDPENRILICTQSNSAADLYIKDYLHPYVESGHEEARPLRIY
YHKRWVATVNQVVQKYCMIDSSPSGRSFRMPTLEDILKYRIVVVTLSISMYLATMELQRG
FFTHIFLDEAAQAMECEAIMPLALANHNTRIVLAGDHMQLSPELFSHIAKDRKLHVSLLE
RLYDHYPSGFPCKILLSENYRAHEAIINFTSESFYDQKLISSGKQPRHEVYYPLTFFTTR
GEDVQDINSTAFYNNSEVYEIVERVYELKKQWPSAWGKFDDQSIGIMTPYSDQVLRIRSE
LRKRQLFGISVERVLNVQGKQFRAIFLSTVRTRRTCKNGDDSDFGFLSNSKLLNTAITRA
QSLVAVVGDPVALCSIGKCSKVWERFLQICEENKSLFGITWLSLRNHLDGVELKKTYVLN
PLAPEFIPRKFKENYVRAQLIPEINLLIPPPFRIPIIAPNFIQFRPAIPWAFAPPRQFRP
VMPQKPPEDIANVQFANSVQQQVPESKPLPLPPQPQQPINPLRDYMSLLPPNTTLADMIL
NPYNQQRWYFYLLETKGLDAAKKFEYLIQTTTNKDIVKTPPIAVSTVPAAAAAVPQIQPI
QAQAPPAPSVTLPPPGFNLPLPLYKRQSVKESTNNVLHHQLEGQPLLMTDRHIQSHHPPP
HSPSRILQQFHHQQQPPPPQQQQQMPQAKPPPAHWQQQQQQQQLNVEFANLNLQANANGA
ASECPDEVLKRNSYASVVRMQKPFDDQDGKLVNGVNSCENVGQVPRLYQYF
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttagtgtttcggagaacttcgcgcgaggatccggaaaaaaatggtcatcgctg
atggaggctagagcttttgagtatttagccgccaaagactggctgaaagctatcgagatt
ttaaatgaactgctcgcattgaaatacctgaacaaatcgcagatcatcacgttcctcttc
gcgaggacggactgtttcaggggcttgggccacaatgaggcagtgatcacagactgccga
agactcttgcagtacattgataatggagatctgcagggtggttcaaagactcgagtcagg
ttgatcattgctctcatgtattcacagagatttgcagaagctgaattggctatacaagaa
tgggtgtcttttcatattggacccaatcagaaggaggcctctaagttcttggagcatctg
cacaatgaaattcaggtcaatggctgtaattccattgagtctgagcttgctgcttatgag
cagaaactgaagacatttcgcatggacaaaactgatcagtctgggtttgtgtgcacgtat
tgcagtttgatgtttaaagataaggcagatctgcgggcgcattgtcaaacggacattcat
cagaggatcattatgtcggacgaggggcgggattggaagtggaggcctccgccccgagga
tcctcgatggaaacctatagactttgcgattccttctcggagaccggtcaatgtcgctac
ggtctccaatgcgtggaggctcatggaacggacgagctgcacgaatggcgcgaaaggatg
aactatagaaggatgagattgcagcgagcttatgaaactgaaatgtatggtaaatcttac
acggaagagttcatcgagaagctgattcagacgacggcgccggataaggtaatgcgcgac
agtataccggaggtgaacgacttgtgctccagtaaactgtccatatcgatatcagcaaag
aacgtgaatcatgtctggatgttcaaattggttgctaacaattgcgacctaaaagcaaca
gcacttctgatggacgcgcaccggacgtacttccgtattatccggctgcagtacgccgtc
ggcgacgactggaaggacattgatatattgccgaacggacaggaatggatcctgaaatcg
gagaacaggcctttcggggaatctcccacgtacagagtagccgtggcattctgcgccgat
atctacggcacgttcaggcaaagcatagtcttcgattttggtacgcagccggtccttgtg
aagcatttgtgcgttgatgtaatacctctaacagacatggaaaagatcaacgagattaga
aaagaagtgcttctgtccagcagcgaaaggtggaacagcgcgaattcagatatagtgaac
ttctcgtcagaattggtggcgttggtgccttcgtacgggaacaccgaatgcgaatgggcc
aaaacactggcctcttcctatccgtgcccgcagtcggacactttcgtgttttctcaggct
accatcatggagaagagactgacccagaacaattatcggtccagaatgcacgagttgctc
tacgtggaagagatggcacgatacgagcatatagctagatacaatgtgaacacgaagttg
atgatcatccatagctatctactttgtccaaacagcactgccagcagtacagccaagtat
tcgagttgcggcgaactcttcgcactgatgcacctaggaaaggacttgtcggaggatact
tcagccggcagattaatactcaacaattgcaccacgatactattatcgcctgatccgccg
gacgcccaaggcaaagtctacgaggctttaatcgaggataaaggaaagacaatgatatac
ttgagattatctgcgaagatggtgtccgcgctcggcctggaggccgaccaagacgtcaag
ttcaacgtgcagtttcaactcaaccgaataccgtactgcgagtggcattatgccatagat
aagattcctgatttcaagctcatctttccggacacctacctggaaccgaacataccgtgg
actccgtcccgtcaatggtccagcacgctggaccctcgtctgaatctcaaacagaaagag
gcgattgtcgccatcactacaccgctgtgtgttcatctgccaccagtattaatcatcggg
cccttcggcaccgggaaaacgttcacattagcgcaagcgatcaaacaacttgtatccgat
cccgagaacagaatcctcatctgcacgcaaagtaacagcgccgccgatttgtacataaaa
gactatctccatccgtacgttgaatctggacacgaggaggcgagacctctcagaatttac
taccacaagagatgggttgctacagtcaatcaagttgttcaaaagtattgcatgattgat
tcgtcgccgagcggtcgaagtttccgtatgccaacgctcgaggacatcctgaaatatcga
atcgtggttgtaacattatcaatatcgatgtatttggcgacgatggaattgcagcgcggt
ttcttcacgcatatattcctggacgaggccgcacaggctatggaatgcgaggcaattatg
ccactggctttggccaaccacaataccaggatcgtacttgccggtgatcacatgcaactg
agtcctgaactgttctcgcacatcgccaaagatcgaaaattgcacgtgagtctgctcgaa
agactatacgatcattacccatccgggtttccatgcaagattctgctgtcagagaattat
agggcgcacgaggccatcatcaatttcacttcggaatcgttctatgaccagaagttgatt
tccagtggaaagcaacccagacacgaagtttattatcccttgacatttttcactacccgt
ggtgaggacgtgcaggatatcaattccacggcattctacaataattctgaggtatatgaa
atagttgaaagggtgtacgaattgaagaagcagtggccgtccgcgtggggaaaattcgat
gatcaatcgattggtataatgacgccctactctgatcaggtcttgagaataagatcggag
ctgcgtaagcgacagttgttcggcatatcggtggagcgagtgctgaacgtgcaaggcaag
cagttcagagcaattttcttgtcaaccgttcgaacgaggaggacttgcaaaaacggcgac
gactctgactttggtttcctatccaactcaaagttactaaacactgccataaccagagct
caaagcttggtcgccgtcgtcggcgatccggtagctctttgctcaataggtaaatgtagt
aaggtttgggagaggtttctgcaaatctgcgaggagaacaagagtctcttcggtatcact
tggttgtcgctgaggaatcacttggacggagtggagctgaagaagacgtacgttttgaat
ccgctggcgccggagtttatcccccgtaaattcaaggagaactacgtcagggctcagctg
atacccgaaatcaatctgctgatcccgccaccgttcaggataccaataattgctccaaat
ttcatacaattccgaccggcaatcccgtgggcttttgcgccacctcgtcaattccgacct
gtcatgccgcagaaacccccggaagacatcgccaacgtacagtttgccaacagtgtgcag
caacaggttccagagagtaaaccgctgccgctgccgccgcagccgcaacagcccatcaat
cctctcagggattatatgagtctactgccacccaatacgacgcttgccgatatgattttg
aatccgtacaaccagcaacgttggtacttctacttgctggagaccaaagggctggacgct
gcaaagaagttcgaatatctcatacagacgaccaccaacaaggacattgtgaagactcca
cctatagcagtctccaccgtccctgccgccgcagctgcagttcctcagatccaacctatc
caagcgcaagcaccacccgctccatctgttactcttccgcctcccggcttcaacttgccc
ctacctctgtacaaacgccaaagtgttaaagaatccaccaacaacgtcttgcaccatcaa
ctggaagggcagccgctcctaatgactgatcgacacatacaatcacatcatcctccaccc
cattcaccttcacgcattttgcaacaatttcaccatcagcaacagccgccgccgccgcaa
caacaacaacaaatgccacaagcaaaaccaccgcctgctcactggcaacaacagcaacag
cagcagcagttgaacgtggaattcgcgaatctgaatctgcaggcgaacgcgaacggcgcc
gccagcgaatgccccgacgaggtgctgaaacgtaacagttacgcgagtgtggtgagaatg
cagaaacctttcgacgatcaggatggcaaattggtaaacggtgttaacagttgtgagaat
gtgggccaggtgcccagactctatcagtacttctaa
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integrated database retrieval system
