Nicrophorus vespilloides (burying beetle): 108557056
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Entry
108557056 CDS
T04922
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvl03041
]
108557056
Enzymes [BR:
nvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108557056
Spliceosome [BR:
nvl03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
108557056
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
Pro-kuma_activ
AAA_30
DsrH
Retrotrans_gag
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
108557056
NCBI-ProteinID:
XP_017768920
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MSSQCAHNLCEKERSKDILINEQLSFTSLLLSDKTLTGLTKSGFEKPSPIQVKAIPVGRC
GFDLIVKSKSGTGKTAVFGIIALEMLNLSNNDIQVLILAPTREIAAQICDVIKSIGADYE
GLKTEYFIGGLPIEDDIEKLKGCHIAVGAPGRIRHLMESEHLKINTVKLLVMDEADKLME
SSFQHDINKIYHKLPPQKQIIASSATYPDKLNKFLAKYMQSPSHISPNIDSPLLLGLKHF
VSEVKTHLNIIRQYNIKNEELIRLLSKISYTQCLVFTNFQSRAESISNTLNRSGWGSTYI
SAAQSQNERLEAIQSLKDMKCRILLSTDLTARGIDASNVDLVINYDVPIDASTYLHRMGR
AGRYGSRGICISIAGKGKELMQFQNIIGMIGGNTMGVGKLPNDDTFPDDLWEVKPESFEQ
IYGIVDESCVDERSLRMKNIKGAILDMKNIDANSDQPECKGDDENTDVNMKQDDLNVGEN
DEATNILLKLANGESSSSIKEMIMKTTNNTSQALLANGEKMDLIKISEDMGLGPTKIPEN
KDYMEGFDTNDILMKLANGEAISDDVNESFKRKRDDQRYQKNVSLMNIAKCLYTSDLYGD
NQVGVSTVQSYLNDMKTGKTEGNKSADFEDVFKFAYDYNTKPNEKHWLDAIGEEFDENEV
VDKPEVINLLDCNDDDEEYDDYDYDEEEEAEYEDEYEEEDEFEESLNKKPKNEICIAGDA
PSLDYAVGVRSDNEYAQNEKFVAHFNNCSDQLLSNFGKFDSAENFHTAFAQWQQQINGVR
DYVQQNIYLQEMNNYQYYKYNM
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgcaatgtgctcataatctttgcgagaaagaacgttcaaaggatattttaatt
aatgaacaattaagctttacatcacttttactctctgacaaaactttaactggtctaacc
aaaagtggattcgagaaaccatcaccaattcaagtaaaagccataccagtaggaagatgt
ggtttcgatttaatagtaaaatcaaagtccggaactggaaaaacagctgtgtttgggatc
attgcattggaaatgctcaatttatcaaataatgatatacaggtgttaatacttgcacca
acaagggagattgcagcccaaatttgtgatgtcataaaatctattggagcagattatgaa
ggtttgaagactgaatactttattggtggtttacctatcgaggatgatattgaaaaactg
aaaggatgccatatagccgttggagcaccagggcggatcaggcatttaatggagtcagaa
catctgaaaataaatacagttaagctcttggtcatggacgaggctgacaagttgatggaa
agcagttttcaacatgatattaataaaatatatcataagctacctccgcagaagcaaatt
atagcttcaagtgcaacatacccagataaactgaacaaatttttagccaaatatatgcag
tctcctagccacatctcgccaaatatagattctcctttacttttgggacttaaacatttt
gtatcggaagttaaaacccatctgaatataatcaggcagtacaatattaagaacgaggaa
ttgataaggttgctttcgaagatttcttacacacaatgtttggtcttcacgaatttccaa
agtcgcgctgaaagtattagtaatactttgaatagaagcggttggggttcgacgtatata
tccgctgctcaatcgcaaaatgaaaggctggaagctatacagagtttgaaggatatgaag
tgccggatacttttgtccacggatttaactgccaggggaattgatgcaagcaacgtggat
ctggttattaattacgatgtaccaattgatgcaagtacttatttgcatcgaatgggccga
gctgggaggtatggatctagaggtatctgcatctctatagcggggaaaggtaaagaattg
atgcaattccaaaatatcattggaatgattggtggaaataccatgggagtcggtaaatta
ccaaacgatgatacgtttcctgatgatctttgggaagttaaacctgagagtttcgagcag
atttatgggattgtggatgaaagctgcgtggacgagagaagcttgaggatgaaaaacatt
aaaggagctatattagacatgaaaaatattgatgcaaacagtgaccaaccagaatgtaaa
ggagatgatgaaaatacagacgttaatatgaagcaagacgatttaaatgtaggcgaaaat
gatgaagctacaaatattctcttgaaattagcaaatggagaatcatccagtagtattaaa
gaaatgatcatgaagacaactaataatacttcacaagctttattagcgaacggagaaaaa
atggatttaattaaaatatctgaggatatgggtttggggccaacgaaaatacccgagaat
aaagactacatggaaggttttgatacaaatgatatattgatgaaattggcgaatggtgag
gcgattagcgatgatgtaaatgaaagtttcaagaggaaaagagacgaccaaaggtaccag
aaaaacgtttcgttgatgaacatcgctaaatgtttatacacgtctgacctttacggtgac
aatcaagttggtgtatctacagtgcagtcttatttgaacgatatgaaaactggaaaaaca
gagggaaacaagtctgcagatttcgaagatgtttttaaatttgcttatgactacaataca
aagccaaacgaaaagcattggctggatgcaattggcgaggaattcgatgaaaacgaggtg
gttgataaaccggaagtcatcaatctgttggattgcaatgacgatgatgaagagtacgat
gactacgattacgatgaagaagaggaagccgagtatgaagatgaatacgaggaagaggat
gaatttgaagagagtttaaacaagaaacctaagaacgagatttgcattgccggtgatgct
ccttcgttggattatgctgtaggtgtccgatctgacaatgaatatgcacaaaatgagaaa
ttcgtggctcatttcaataactgcagcgatcaattgttatcgaatttcgggaagtttgat
tcagctgaaaatttccacactgccttcgctcagtggcaacaacagatcaacggggttcgt
gactacgtccaacagaacatctatcttcaagagatgaacaactaccagtattacaaatat
aacatgtaa
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