Nicrophorus vespilloides (burying beetle): 108557681
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Entry
108557681 CDS
T04922
Name
(RefSeq) polyadenylate-binding protein 4-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl03015
mRNA surveillance pathway
nvl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108557681
09123 Folding, sorting and degradation
03018 RNA degradation
108557681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvl03019
]
108557681
03041 Spliceosome [BR:
nvl03041
]
108557681
Messenger RNA biogenesis [BR:
nvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108557681
mRNA cycle factors
Stress granule specific factors
108557681
Spliceosome [BR:
nvl03041
]
Complex C
Other components
Complex C specific factors
108557681
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RRM_10
RBD_DEAH11
POP1_C
Motif
Other DBs
NCBI-GeneID:
108557681
NCBI-ProteinID:
XP_017769792
UniProt:
A0ABM1M5E2
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MNQAPNYPMASLYVGDLHSDITEAQLFEKFSGAGPVLSIRVCRDLITRRSLGYAYVNFQQ
PADAERALDTMNFDTIKNRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA
FGNILSCKVAQDETGNSKGYGFVHFETEEAANKSIEKVNGMLLNARKVYVGRFIPRKERE
KELGEKAKLFTNVYIKNFGEDLSDDQLKKMFEKFGHITSYKIMNKEDGKSKGFGFVAFEE
SGAAEAAVNELNGKEIVEGKPMYVGRAQKRAERQLELKRRFEQLKIERMNRYQGVNLYVK
NLDDTIDDERLRKEFSLFGTITSAKVMMDEGRSKGFGFVCFSSPEEATKAVTEMNGRIVG
SKPLYVALAQRKEDRKAHLTSQYMQRLANIRMQQMGSYIQPGAPPNYYMPTLTAQPQRYI
GTTTTHIPPMRSNPRWPQNPARPSQGGANAYAGMQGTFRATRPTNQSGTMRGNMSVARPI
TGQHQSNIQVRPLTGQNVVPNTARPANYKYTSNMRNPPQSLNMQGAAPVQQQAVHIQGQE
PLTASMLAEALPPDQKQMLGERLFPLIHRMYPDLAGKITGMLLEIDNSELLHMLEHNESL
KSKVEEAVAVLQAHQANKAIKKE
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagctcctaactatcccatggcgtctctgtacgtcggggatttgcactcagat
attactgaggcacagcttttcgagaaattttcgggcgctggtcccgttctctcgatccgc
gtgtgcagagatctcatcactagaagatctttgggttacgcttatgtgaactttcaacaa
ccagcagatgccgaacgtgcattggatacaatgaattttgatacgatcaagaatcgtcca
atccgtatcatgtggtcccaacgtgatccatctctacgtaaatctggagttggaaatgta
ttcatcaagaatttggataaatccattgataataaggctatgtatgatacattctcagcc
tttggaaacattttgagttgcaaggttgctcaagatgagactggcaacagcaagggctac
ggctttgttcattttgaaactgaggaagcagctaacaagtcaattgaaaaggtcaatggc
atgttgcttaatgccaggaaggtatacgttggtagattcattccacgtaaagaacgcgaa
aaggaattgggagagaaagctaagctgttcactaatgtgtacattaagaactttggtgaa
gatttaagtgatgaccaattgaagaaaatgtttgaaaagtttggtcacattacaagctac
aaaatcatgaataaagaagatggtaaatcaaagggattcggttttgttgcatttgaagaa
tccggtgctgccgaggccgccgtcaatgagttgaatggaaaggaaattgttgaaggtaaa
ccaatgtacgttggacgtgcccagaagagggctgaacgtcagctcgaacttaagcgtaga
tttgagcagctcaaaattgagcgtatgaaccgctaccaaggcgttaacttgtatgttaag
aatttggatgacaccattgatgatgaaagattgaggaaggaattttcgctctttggtaca
attacgtctgctaaggtaatgatggacgaaggtcgtagcaagggtttcggttttgtttgt
ttctcctctccggaagaagcgaccaaagctgttactgaaatgaacggccgcatcgtgggt
tcgaagccgctgtacgttgctttggcccagcgtaaagaagatcgcaaagcccatttgacg
tcgcaatacatgcaacgtttggcaaatatcagaatgcaacaaatgggatcttacattcaa
ccaggggcaccgccaaactattacatgcctacgttgactgctcaaccccagaggtatatc
ggcacgaccaccactcacataccgccgatgcgttccaatccaagatggccccagaatccc
gcgcgtccatcacaaggaggagccaatgcctatgctggtatgcaaggtactttcagggcg
actaggccaacaaaccaatctggaactatgcgtggtaatatgagtgttgcaagacctata
actggccaacatcaatctaatatacaagttcggccacttacaggacaaaacgttgtacca
aataccgccaggccagcaaactacaaatacacatccaacatgagaaatccaccacagagt
cttaatatgcaaggtgcagctcctgttcaacaacaggcagtacatattcaagggcaggaa
ccgttgaccgcctccatgttggctgaagccttgccaccagaccagaagcaaatgcttgga
gaacgcttgttcccacttattcatcgtatgtacccagatcttgctggtaagataactggt
atgttgttggaaattgataactcagaattgctccatatgctggaacataacgagtcgttg
aaatcaaaagttgaagaggctgttgccgtgctccaagcccaccaggctaacaaggcaatc
aaaaaggagtaa
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