KEGG   Nicrophorus vespilloides (burying beetle): 108558018
Entry
108558018         CDS       T04922                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
nvl  Nicrophorus vespilloides (burying beetle)
Pathway
nvl03082  ATP-dependent chromatin remodeling
nvl03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:nvl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    108558018
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    108558018
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:nvl01009]
    108558018
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nvl03021]
    108558018
   03036 Chromosome and associated proteins [BR:nvl03036]
    108558018
Protein phosphatases and associated proteins [BR:nvl01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108558018
Transcription machinery [BR:nvl03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     108558018
    SWI/SNF complex
     108558018
Chromosome and associated proteins [BR:nvl03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    108558018
   PBAF complex
    108558018
   SWI/SNF complex
    108558018
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd
Other DBs
NCBI-GeneID: 108558018
NCBI-ProteinID: XP_017770290
LinkDB
Position
Unknown
AA seq 381 aa
MAIRTFGDKPISFQLEENGEYYCVGSEVGNYLRLFRGSLYKRYPGMYRRTITVEERKRLI
DSGLSQHVLASSVSLLRTSEVEDIIEGNDVFRYKAVSVHTTEPLLPREGKTKKSMQWVPS
LPNSSHLDAVPQATTINRNRVASKKVRTFPLCFDDSEPQVHTENAGQSELLVPIRLDMEI
EGQKLRDTFTWNKNESLISPEQFAEVLCDDLDLNPLTFVPAIAQAIRQQLEVFPNEPPGI
IEENCDQRVIIKLNIHVGNTSLVDQVEWDMSQKENNPEHFANKLCAELGLGGEFVTAIAY
SIRGQLSWHQRTYAFSEAPLPIVEVPFRPPCESDQWAPFLETLTDAEMEKKIRDQDRNTR
RIRRLANTTPGCKYKQSRHMM
NT seq 1146 nt   +upstreamnt  +downstreamnt
atggcgatcagaacgtttggggataagccgatcagctttcaattggaagagaatggtgaa
tattattgcgttggatccgaggtgggcaattacttgcgcctcttcaggggctccctgtac
aagaggtaccccgggatgtaccgtaggacgataacagttgaagaacgaaaacgcctcatc
gacagcggtctcagtcaacatgtcttggcaagttccgtttcactgctcagaacatctgaa
gttgaggacattattgagggcaatgatgtattcagatacaaagcggtgtcggtgcacaca
acggaacctctgcttcccagagagggcaagacgaagaagagcatgcaatgggtgccgtcg
cttccgaactcgagtcatctggacgccgtgccacaagccacgacgatcaacagaaaccgt
gtcgcctccaaaaaggtgaggacgtttccgttgtgcttcgacgacagcgaaccgcaagtg
cacacggagaacgccggccagtcggagcttttggtaccgatccgtctcgacatggaaatc
gagggtcagaagctcagggacacgttcacttggaacaagaacgagagtttgatcagtccg
gagcagttcgctgaagttctctgcgatgatctggatttgaacccgctgacctttgtgccg
gctatagcgcaggccatccgtcagcagctcgaggttttccccaacgaaccacccggcatc
atcgaggagaactgcgatcagcgcgtcatcatcaagctgaacattcacgttggaaacact
tcgttggtcgatcaggtggaatgggacatgtcgcaaaaggagaacaatccagagcatttc
gcgaacaagctgtgcgccgagctgggattgggaggagaattcgtgacggccatcgcgtat
tccatccgaggacagttgtcctggcaccaaaggacgtacgctttcagcgaagccccgtta
ccgatagtcgaggtgcctttccgtccgccgtgcgaatccgatcagtgggctccgttcttg
gagacgctcaccgacgccgaaatggagaaaaagatccgcgatcaagaccgcaacacccgg
cgcatccgccgtttggccaacacaacacctggctgcaaatacaaacagtctaggcatatg
atgtaa

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