Nicrophorus vespilloides (burying beetle): 108559085
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Entry
108559085 CDS
T04922
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nvl03036
]
108559085
Enzymes [BR:
nvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
108559085
Chromosome and associated proteins [BR:
nvl03036
]
Eukaryotic type
Gene silencing
piRNA pathway
108559085
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
Motif
Other DBs
NCBI-GeneID:
108559085
NCBI-ProteinID:
XP_017771716
LinkDB
All DBs
Position
Unknown
AA seq
1548 aa
AA seq
DB search
MENGKDKQKKVVKPNKKPINANLCSNKNGQASKGAIPKIKPLVKQRANDLLHKKKDLSSE
SKPSGMNVNQASAQKTEDNSIEVDVQNTKERQTYENVISTIATADDQLRKLRVLLKKRGK
VDEPVELSQENENNPTEIAVLRDLLKNRGKRNSGLNSSDNTGLNSSENSGLNSSDNTVLN
SSENSGLNSSAVNNTDVERNAEVSMDQLNLIPAGATLANRIQALQKIANNMGHGTYYNTI
VPCNKEENENDFKGIEELNSNCTFRTVDSNTHSTSSSTSRYKCNISDARVIPINSVNNTD
RKQFRIGCSCKQCKHFNISTFEDMFDHTTNRTPEINVPSYMKHFIRDSTTEYTFSTIYAK
KFDSSMRSKGKSRQVLAHGLHPPVMAELFQEIPFEKSVYSSLHQFNFKELKPVQTFALPA
IMNNSHVCMVSGNKSGKTIAYISALFSFKMDGKMYAKLPDKDGPFSIVLCSNSIKVENIH
DMFKNFSKSKELKSSFKCSMAFNLIDTKMSKINKNADVMVVNPSSLIVLLKNNIITLKRL
CHIIIEDLDIIARDYNKTLLSIFKLINEMLSHRRGDQSVQFISTAENWTIDLENTLKKLY
KLPLICIANPIQAAAYGTANIQLIEVSVNKKATKVVEIIRDLSQIQKSLIVCDIEDIETI
RKEFRANDMDILCIDESMNSDDIYDIENIWCRRIYNTNAVLVCTDQILSANLCIRDAWLL
INYSIPDTWSTFTKRFAYLIDHYKSPFEFKNRCYNSKIITLIDENAFMTFPRINHFFESM
GATLPTRLITAAKEYREMEEEGKVVANVKLCNVLKTFGKCNILKCSDRHILNKKLDGPNH
PFSTTMGKLKYKILEILNINRFLVRPVEYIDCDNVIHDLEAPIQNISDVLSSIKSYDKST
SIKIRGNYVYIEESNCIRCVVNKIVTMDSITKEPILVEIQSLDFGYQKVVDSNKLMIIPN
VLNNVPPSYIELCIGNLIPSNNEPDWNSLSIMHMAMKLNTEKYKNKNYYCLDNILLQIGN
TIWVEDLHLNVNLANVSKEVTLFRLRKFVEERRLANINEESMIGLYALCEKYGLQLPKSR
IIVKKILKDTQIQPQWAHLSDNEFNSVYFCSGINPNRFYVRLSKHTKLYIQMQKDIQKEI
KSAPYLSLNSKQITVGHCYLGMDPNDSEYYRVIVQEIKGDKANCVFVDDGTLLNIPLTEL
KHLSNHFISRLPFQAIECSLYGIKPCNSDWTCEVDVLYGYCQEPHSDYYRKLYSFTKQTD
IGKFNANSRYEIILVDCMEGTTILNQLFVDSGYGTCSRNVTFDIDTKALYLKHNGCRSED
AKHEESNIDQNDEMDDDEWDFELFDAEQFFKALTGQIHGDILTLSHSENKQSVEVDNSPV
PTTSGHCLPDILWYQTSNSIRLDISLIDVTDYSLTLAAGRLLSFQCMQNGRDYRFSFQLF
DKVQKKFEHKAKARYIKVKLTKVKEIDWPRLMFLKDRMRNIKYNFNKIYIEEDVETKKTF
LDIGKTEEDLINNDEDEEQDDNTNLDVYDSFSDTDSTDYEEETNSDAE
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatggaaaagacaagcaaaagaaagttgttaagcccaacaagaaacctattaat
gcgaacttatgttctaataaaaatggtcaagcttcaaagggtgctattccaaaaattaaa
cctttagtaaaacaaagagcaaatgatttattgcacaaaaagaaagatctttcatctgaa
tctaaaccttctggcatgaatgtgaatcaagcaagtgcacagaaaactgaagacaattca
attgaagtggatgtgcagaatactaaagaaagacaaacatatgaaaatgttatttcaact
attgcaactgcagatgatcagttgagaaagttaagggttttattgaagaaaagaggaaag
gttgatgaacctgtagaattatcacaagaaaatgaaaataatccaactgaaatagctgta
cttagagatttattaaaaaatagaggaaaaaggaactctgggttaaattcatcagataac
actgggttaaattcatcagagaactctgggttaaattcatcagataacactgtgttaaat
tcatcagagaactctgggttaaattcatcagctgtaaataatactgatgtggagagaaat
gctgaagtatcaatggaccagttaaatttgataccagctggtgctacattggcaaaccgt
atacaggcgctccagaaaattgcaaacaacatgggacatgggacatattataatacaatt
gtaccatgcaataaagaagagaatgaaaatgatttcaagggtattgaagagttaaattca
aattgcacttttcgaactgttgacagtaatacacatagtacaagttctagtacttccaga
tataaatgcaacatatctgatgcaagggtcataccaattaattcagtcaataatacagac
agaaagcaattcagaattggctgctcctgcaagcaatgtaaacactttaacattagtacg
tttgaagatatgtttgaccacactactaataggactccagagattaatgttccctcatat
atgaaacattttatcagggacagtacgacagaatatacattttccactatttacgcgaaa
aaattcgattcctcgatgagatcgaaaggaaaatcacgtcaagtgcttgcacatggttta
catccaccggttatggcagaattgttccaggagattccgttcgaaaaatctgtttacagc
tctttgcatcaattcaactttaaagagttgaagcctgttcaaacattcgctcttcctgct
attatgaacaattcccatgtttgcatggtcagtggaaataaaagcgggaaaactatagct
tatatttctgcccttttctcgtttaaaatggacggtaaaatgtacgcaaaattaccagat
aaagatggtccatttagcattgttctttgctctaattcaatcaaggttgaaaatatccat
gatatgttcaagaatttttccaaaagtaaagaactgaagagcagctttaaatgttccatg
gccttcaatttgatcgacacgaaaatgtcgaaaatcaacaaaaatgccgacgtgatggtg
gtaaaccctagctcactgattgttttattgaaaaataacatcattactttaaaacgtttg
tgtcatataattattgaagatctcgatatcatagccagagactacaataagactttgttg
agcatatttaaattgattaacgaaatgttaagtcaccgacgtggcgaccagtcggtacag
tttatcagtacagctgagaattggactatagatttagagaatacccttaaaaagttgtac
aagttgccattaatctgcattgctaatcctatacaagctgctgcttatggaactgcaaat
attcaacttattgaagtatcggtaaataagaaagcaacgaaggttgtcgaaattattcgt
gacctatcgcaaatacagaaatctttgattgtatgtgatattgaagacattgagacaatt
agaaaggaattccgtgcaaatgatatggatatcctgtgcatcgacgaatctatgaattcg
gatgacatatacgatatagagaatatttggtgtagaaggatctataacactaatgctgtg
ttggtttgcacagatcaaattttgtctgcaaacttgtgcatcagagatgcatggctgttg
attaactattctataccagatacttggagcacctttacaaaaagatttgcgtatctaatt
gatcactataagagcccttttgaatttaaaaatcgttgttacaactctaaaattataaca
ctgatcgatgaaaatgcgtttatgacttttcctaggataaaccattttttcgaaagcatg
ggagcaactttaccaactagattaataacagctgctaaagaatatagagagatggaggaa
gagggtaaggttgttgcgaatgtcaaattgtgtaatgttttgaaaacatttggcaaatgt
aatattttgaagtgtagtgatcgacacatattgaacaaaaaattagacggtccgaatcat
ccgttctctacaactatgggaaagctaaaatataaaatccttgaaatcttgaacattaat
aggttcttagtaagaccagtagaatatattgattgtgataacgttattcacgatttagaa
gctccgatccaaaatatttcagatgtattgagtagtattaaaagctacgataaatctaca
agtattaaaatacggggtaattacgtttatatcgaagaaagtaattgcatcagatgtgtt
gttaataaaatagtaaccatggatagtatcaccaaagaaccaatcttagttgaaattcaa
tctttagattttggatatcaaaaagtagttgatagtaataaactcatgataattccaaat
gtattgaacaacgttccaccttcttatattgaattatgtattggaaatttgattccatca
aataacgagcccgattggaattctttatcaataatgcatatggctatgaagttgaatact
gaaaaatacaagaataagaattactactgcctcgacaatattctactgcaaatcggcaac
accatctgggtggaggacttacacctcaacgttaatcttgctaatgtttccaaagaagtt
acactttttagactaaggaaatttgtcgaagaaagaagattggccaacataaatgaggaa
tcgatgattggattgtacgcattgtgcgagaaatacggtttgcaattgcctaaatctcga
ataatcgtaaagaaaattttgaaagatacgcaaattcaacctcaatgggcacatctatct
gacaacgagttcaatagtgtttacttttgtagcggaattaatccgaataggttctatgtt
cgcctgagcaagcatacgaaactttacatacaaatgcaaaaagatattcaaaaggagatt
aaaagtgcaccatacttaagtttaaattcgaaacaaattactgttggtcattgttatttg
ggaatggatcctaatgattctgaatattacagagtaatagttcaagaaatcaaaggagac
aaagcaaattgcgtttttgtggatgatggaacattactgaacataccattaactgagctt
aaacatttgtcaaatcatttcatatcaagattaccgtttcaggcgattgaatgttcattg
tatggcattaaaccatgcaattccgactggacgtgtgaagtagatgtgctatacggttac
tgtcaagaaccgcacagtgattattacagaaaattgtattctttcaccaagcaaactgat
attggaaagttcaatgcaaatagcagatatgaaataatacttgttgactgcatggaagga
actacaatcctaaaccaactatttgtagatagtggatatggtacttgtagcagaaatgta
acattcgatattgatacaaaagcattgtaccttaaacataatggttgtcgcagtgaagat
gctaaacatgaagaaagtaatatcgatcaaaatgatgaaatggatgacgatgaatgggac
tttgagctatttgatgctgaacagttcttcaaagctctaacaggtcaaatacatggtgac
atactaactttgagtcatagcgaaaataaacaatctgttgaggttgataatagtcctgta
cctacaacttctggccattgcctcccagacattctctggtatcaaacatcaaacagtatt
cgtcttgatatttctttaattgatgttacagattactcattgactttggcagctggtaga
ttgttaagtttccagtgcatgcaaaatggcagagattacagattttccttccaactattc
gataaagttcaaaaaaagtttgagcataaagctaaagctagatatattaaggttaaattg
actaaagttaaggaaatcgattggcctagattaatgttcttaaaagatagaatgaggaac
attaagtataatttcaacaaaatttacattgaggaggacgtcgaaacgaagaagacattt
ttagatattgggaagacggaggaagatcttattaacaacgacgaagacgaggaacaagat
gacaatactaatttagatgtttacgatagtttctcagatacagattcgacagattatgaa
gaagaaactaactctgatgcagagtag
DBGET
integrated database retrieval system
