Nicrophorus vespilloides (burying beetle): 108559258
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Entry
108559258 CDS
T04922
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108559258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvl03019
]
108559258
Messenger RNA biogenesis [BR:
nvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108559258
mRNA degradation factors
5'-3' decay
Decapping complex
108559258
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
108559258
NCBI-ProteinID:
XP_017771959
UniProt:
A0ABM1MBK9
LinkDB
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Position
Unknown
AA seq
738 aa
AA seq
DB search
MANTFFGFDTLNDHEITYIGGEDVVDGRDGEESEYDALNDETFGGLGDSAVVDDWEQQHE
QFAEIAENNKHIDHLENCISQLVCDDSDESISSDGDIFNSNNLLLSLKQSLSKELNLYDN
NGPKNEKSVWKHEQSGPPPAQPGTNSQVPSKICTVEELERGLMQQKPMQFPPKYSGPMWP
VQPPVQPPQHYPPGLYPIGKQLPPGFGLMIRPNMPPQPANIPPGFRMPMPAQNMMLRSNY
LGQYLTHAPPPGKMMLYNMNYPSGMPRNNNNIQPPPPMLRHQQPSSPHLQQQQHQRLQHL
HTTLSRSFDNILNDNSTMQKFIEMSRIPVKDEYDGLMTNREKQWLLNIQQIQLNTGTPYF
DDYYYTVFKERKAKNNKDNHRNADRRFQRHNHRNNQQDRQDNALTSRVYTPLQFENSLGK
LQCGSVTAPRKIIDMDVVTLEKDSESTPTRDTRKTKQLLLELEGLYNMLLKAEDLLNPVA
IYNTDKLVQQKQKQRLRELDTASTPEQKQEILKLLQEESTSNPEKPSDYISKIMTAFLQD
DKVASYLNIRKGKMLLLRVLPQILSDNRSRTELELWTKILTSLPIVGRRDTAGDNILPSF
HPYFKRYIQACQIADILELVSGLVEVVRQENSRSTPLSHQAKSPLYFITANKFGVSALVT
MFIRAEYLIYANEVSDKQKTEWINFVVNWADLIVSGRGNIARPIELIPRKAYERHTTRIT
TLTDEKKMLLEKHYVELV
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggctaacacattttttggtttcgatactctcaacgatcatgagatcacttatatcgga
ggagaagatgttgtagatggcagagatggtgaagaatctgagtatgatgctcttaatgat
gagacgtttggtgggctgggagattccgctgttgtagatgattgggaacagcaacatgaa
cagtttgctgagattgccgagaacaataaacatattgatcatttagaaaattgcatcagc
caattggtgtgtgatgattctgatgaatccatttcttcagatggtgatatcttcaactct
aataacttattgctaagtttaaagcaatcattgagtaaagaattgaatttatatgataat
aatggtcccaaaaatgagaagtctgtgtggaaacatgaacaatctggtcctccacctgcc
cagcctggaactaacagtcaggtacctagcaaaatttgtacggtggaagagctggaaaga
gggctgatgcaacagaaaccaatgcagtttcctccaaaatattctggtccaatgtggcct
gtacaaccgcctgtacaaccacctcaacattatccaccaggcttatacccaataggaaaa
cagcttccaccgggattcggtttaatgattcgaccgaatatgccgcctcaacctgcaaat
ataccaccgggatttaggatgcctatgccagcgcagaatatgatgctacgcagcaactat
ctagggcagtatctaacgcatgctccgccaccaggaaaaatgatgctctacaacatgaat
tatccatctggaatgccgaggaacaacaataatattcagcctccgccgccaatgttgagg
caccaacagccgtcgtcgcctcacctgcaacaacagcaacatcaacgattacaacatctg
catacgacgttgtcacgatcatttgacaatattttgaacgacaattccactatgcagaaa
tttatagaaatgagcagaatccctgtaaaagatgaatatgatggtcttatgactaacaga
gagaagcagtggttgttaaacattcagcagatacaactgaatacaggcactccatacttt
gatgattattactacactgtttttaaagagcgaaaagccaaaaataacaaagataaccat
cgtaacgccgacagacgtttccagagacataatcataggaataaccaacaggataggcag
gacaatgcgttaacttcacgcgtgtatacacctctgcaattcgaaaattcgttgggaaag
ttacaatgtggatcagttacagctccaagaaagataattgatatggacgtagtgacactg
gaaaaagactctgaaagtactccaacaagagatacgcgcaaaacaaaacaattattgctc
gagctggaagggttatataatatgttgctgaaagcagaggatttattgaatccagttgcc
atttacaatactgataagctagttcagcagaagcaaaaacagagactgagagaattagat
actgcgagtactcctgaacagaagcaagagatcttaaaactgctgcaagaggagagcacc
agtaatcctgaaaaaccctccgactatatatcgaagataatgaccgcgttcctgcaggat
gacaaagttgctagttatttaaatattagaaaggggaaaatgcttctattgagagtcttg
ccacagatactttcggacaatcgttccagaactgagttggaactgtggacgaagatcctc
actagtttaccaatagtggggagaagggataccgccggtgataacattctcccaagtttt
catccctacttcaaacgctatatacaagcatgccagatagccgatattttggagctcgtc
tctggattggtggaagtggttcgccaggagaacagcagaagcacacctttgagccatcag
gcaaaatcaccactgtattttatcactgcgaacaagttcggtgtttccgctctggtaacg
atgttcatacgtgctgaatatctaatctatgcaaacgaggtctccgacaaacaaaagacc
gagtggattaatttcgtcgtgaactgggcagaccttatcgtatctggccgaggaaacatc
gccaggccaatcgagttgatccctcgcaaagcgtacgagcgccatacgacaagaataacg
acgttaaccgacgagaagaaaatgcttttggagaaacattacgttgaattggtttga
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