Nicrophorus vespilloides (burying beetle): 108560592
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Entry
108560592 CDS
T04922
Name
(RefSeq) transient receptor potential cation channel trpm isoform X1
KO
K04978
transient receptor potential cation channel subfamily M member 3
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nvl04040
]
108560592
Ion channels [BR:
nvl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108560592
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
TRPM_tetra
Sec10_N
Motif
Other DBs
NCBI-GeneID:
108560592
NCBI-ProteinID:
XP_017773706
LinkDB
All DBs
Position
Unknown
AA seq
1741 aa
AA seq
DB search
MISAKPKHILISSKDFQELNALDLLKKSKEKPPARTWIESNFQKRECTTFIQCPIDEQRC
SCGRPSTYHGIATLDVPNSETWLPSRHTRATATDAFGTLDFQGGAYSTKAQYVRLAHDTR
PERLLQLFTREWNLEPPKLLITVQGGKANFELQPKLKKVLRSGLLKAANTTGAWIFTSGT
NTGVTRQVGDALLTERSQRSGKIISLGIAPWGIIENNHELLGINRDVQYHSISSPRSRLA
VLNNRHSYFLLVDNGTQGKYGAEIVLRRKLEKFISMQKLHPCQGIGLAQKYHPNGTEYTY
STTPVVCLVIEGGTNTIRAVLEYVTDDPPVPVVVCDGSGRAADLIAFMHKYASDSDDIIE
NMKDYILTLIQRSFEVDLNKAECLYGELLQCTKRKNLITVFRISEHLDSRSQELDQTILT
ALFKAQHLTPSEQLSLALTWNRVDIARSEIFVYGQEWPEGALEEAMMQALEHDRIDFVKL
LLEKGVGMKEFLTIPRLEMLYNTKQGPSNTLWYILKDLKAIPEGYNYTLHDIGLVINKLM
GGAYRAYYTRRKFRPIYAKVMNKKPNNRHSSSFVKYCGNAMSLLAETLPTKDGLCSFEFP
YNELFIWAVLTKRQCMALLMWSRGEEVLAKSLVACKLYKAMAHEASVDMETEVYEELRGY
GKEFETIALDLLDYCYRKDDDLAQQLLTCELRNWSGQTCLSLAVAANHRALLAHPCSQVI
LADLWMGGLRTRKNTNLKVILGLVFPPYIFRLEFKTVEELQLMPQTQEEHLENDDDDDSS
EPDKSPDAENGRKRSLVITSPIHHFSVQNKKGRKCSLIKTTAIHQLSLHSKTLLSDNFIR
RDTIVQENGRVFPDLEETKYSFTFEEKSLQKKRTRPLKLKKKVYEFFTAPITKFWANSIS
YLIFLIIYSYMVLVRMDQTPRWQEYVVISYICSFGCEKIREIISSEPVAVRHKLAVWASN
MWNLCDASAITFFFIGLGFRLKPYTMEVGRVMYCVDSIYWYLRILNILGVNKYLGPLVTM
MGKMVKNMIYFVVLLLVVLMSFGVSRQSILYPNKEASWRIVRDVFFEPYFMLYGEVFADR
IDPPCGGEGEEECLTGRWINPAVMSIYLVIANILLINLLIAVFNNIFIEVNAVSHQVWMF
QRFTVVMEYEQKPILPPPVILICHMYLLFKYFKRKRKGLRETYDNGLKLFLEPKAMNMLY
KFEEECVEGYFSEQEKKQSQSMEYRIKVVIERMEYLAQKVEDIDTKVNTQGTLLQNIEFR
SRKIGEAFNELAEMMHRFLAAKRMSDDKQTLAPDRTGDRLRRSSERSDAPSDDSHGLLQP
LRKRPTRSLTEVRPDAYIFDDGAHYEVRTVAEESDEHLESMSAAGSRKEIHMMEQIERQR
SSDSKTSVDSDRGDTEEDEYKVSQETLTLESLKFRYAQRRRDSFGGRRNSEGGYGEEAFS
GSRPSLTRRQLSETQSEPDSSEPMVMGGGSNSLQLRAIVQERNVAFAEPKINVIPPSSSS
SGCMCGIGTSSAGPAVVAASVSSAAPAGNSAGGGVSNGNAQPHNPRSMLMSMHTEYTSIT
DELESVCGLLSPPRTPRLLSPPRPGQSAPVHNRHRRRCASEMSNPEFALFMEKQHLRSAE
EYDYMLMEDLIQRKYDEDEDEPVEQNPALLTVVQESREFRNSYPGRSLRRASAIEDDTML
PIVCVNPRQESEESSENMPLVQPLPPRPTIVVDSSQLPIHEEVVKKADSKASLHMQSETM
C
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atgatcagtgcaaaaccgaaacatattttgatatcctcgaaagatttccaggagctgaac
gctttggatttacttaagaaatctaaagaaaagcctccagcgcgcacttggatagagtcg
aacttccaaaagagggaatgcaccacattcatacaatgtccgatagatgaacaaagatgc
agttgtggtcgacccagcacatatcatggtattgcgactctggatgttcccaactcagaa
acgtggctgccctcaagacacacacgtgccacagcgacggatgcttttggtacactcgac
tttcaaggaggagcatattccaccaaagcgcagtacgtgcgtttggcacacgacacaagg
ccggaacggctgttgcagctctttaccagggaatggaacttggaaccaccgaagcttcta
atcactgtgcaaggtggcaaagcgaacttcgaacttcagccgaagctcaagaaagtgttg
cgcagcggattactcaaagctgcgaacaccactggtgcttggatcttcaccagcggaaca
aatacaggtgtaacacgacaagttggagatgccctcctaacagaaagatctcaacgtagt
ggaaaaatcatatccttgggaatcgcaccttggggaattattgagaacaatcacgaatta
ttaggaattaacagggacgtacaatatcactccatatcctcacctagatcaagattagcc
gttttaaacaatagacactcatattttctcttagttgataacggtactcagggaaagtac
ggtgcggaaatagtattaagaaggaaactagagaagttcatatccatgcaaaagttgcac
ccttgtcaaggtataggtcttgcgcaaaaatatcatcccaatggaactgaatatacttac
agtactacgcccgtagtatgtcttgtgatagaaggaggtacaaatacaataagggctgtg
ctagaatacgtgacagatgatcctccggttcctgtagttgtgtgcgatggatcaggaaga
gcagctgaccttattgcttttatgcacaaatatgcttccgactctgacgatataatagaa
aacatgaaagactatattttgacgttaatacagagatcctttgaagtagacctgaataaa
gcggagtgtttgtacggcgaattgcttcagtgcacaaaaagaaagaatctgatcacggtg
ttcaggatctcggagcatctggattctaggtcgcaggaactggaccaaactattctgacc
gccctcttcaaggcacagcacttgacgccatcggaacagctctcacttgctttgacatgg
aacagggtggatatcgcccgatccgagatcttcgtttacggacaggaatggcctgaaggg
gcgctcgaagaagccatgatgcaggcgttggaacacgaccgaattgacttcgttaagttg
ctgcttgagaagggtgtcgggatgaaggaatttcttacaataccgcgtctcgagatgtta
tataatacgaagcaaggtccgagcaataccttgtggtacatcctgaaagatctgaaagcc
attccggaaggatacaactatactttacacgatattggattagttattaacaaattgatg
ggtggggcttatagagcgtattatactagacgaaaattcagaccaatctacgccaaagtg
atgaataaaaagcccaacaaccgtcattcatcttcatttgttaagtactgcggaaatgca
atgagtctattggctgagacattgccaacgaaagatggactatgctccttcgaatttccc
tataatgaattatttatttgggcagttttaacgaagagacagtgtatggctcttctaatg
tggagtcgtggcgaggaagttttggccaaatcccttgtcgcctgtaaattgtacaaggca
atggctcatgaagcctcagtggacatggaaacggaagtttacgaggaacttagaggttac
ggcaaggagtttgaaactattgctttggatctcctagattattgctaccgcaaggacgat
gatttggctcaacagctattgacttgtgaacttcggaactggtcaggacaaacatgtctc
agtcttgcagttgcggccaatcacagagcccttcttgcacatccttgttcgcaggtgata
ctagccgatctttggatgggcgggctgaggaccaggaagaacaccaatctcaaggtcatc
ctgggccttgtattcccaccatacatattcaggttagagtttaaaacggttgaagagctc
cagttgatgccgcaaacgcaagaagaacatttagaaaatgatgacgacgatgacagttca
gaaccggacaaaagtccagacgccgagaatggccgaaaacgttcattggttataacatcg
ccaatacatcatttttccgttcagaacaagaaaggccgaaaatgttcattgattaaaacc
acagcaatacaccaactttctctacacagcaagactctactatcggacaattttattcgg
agagacaccattgtccaagaaaacggaagagtttttccggatttagaggaaaccaagtac
tcattcacgttcgaggagaaaagtctgcagaagaaaaggacgagacccttgaaattaaag
aagaaagtatatgagtttttcacggcaccaataaccaaattttgggctaattccatttcg
tatttgatttttttgatcatctatagttatatggttctggtgcggatggatcagacgccg
aggtggcaagagtacgtggtaatttcctacatttgtagtttcggttgcgaaaagattcgt
gaaattatttcctctgaaccagtggcggtgcgtcacaaattggcggtttgggcttcgaac
atgtggaatctgtgtgatgcatcggcaatcacgttcttctttattggcttaggttttcgg
ttaaaaccttatacaatggaggtgggccgtgtcatgtattgcgtagacagtatttactgg
tacctcaggattctcaacatcttaggtgttaataaatatttgggacctctcgttactatg
atgggaaaaatggttaagaacatgatatactttgtggtgttgttgctggtggtgttgatg
agtttcggagtgagtcggcaatccattctatatcctaataaagaagctagctggaggatt
gttagagatgtttttttcgagccgtatttcatgttgtacggagaagtgtttgccgataga
attgatccgccttgcggtggtgagggagaagaggagtgcttgacgggacgttggattaat
ccagcggtgatgtctatttaccttgtaattgccaacatcctgttgataaatctgcttatc
gcggtattcaataacatcttcatcgaagtcaacgctgtatcgcaccaagtttggatgttc
cagcggttcactgtcgttatggaatatgaacagaagccgatacttccacctcctgtaata
ctcatttgccacatgtacttattattcaaatatttcaagaggaaaaggaaaggcctgagg
gagacttacgataacggactgaaactttttttggaacctaaagccatgaacatgctgtac
aaatttgaggaggagtgcgtggagggctacttcagcgagcaagagaaaaaacaatcgcaa
agcatggagtatcggatcaaagtcgtgattgagaggatggagtatctggcccaaaaagtg
gaggacattgacacaaaagtgaacacgcaagggactttactgcagaatatcgagtttcgc
tcgaggaaaattggcgaggctttcaatgaactagcggaaatgatgcacaggttcctcgca
gccaaacggatgtcggatgataaacaaacgctggcgccggatagaacaggcgataggtta
cgaagaagcagtgaaagatccgacgctccttcggatgattcacacggtttgctacagccg
ctgaggaagaggcccaccagatctttgaccgaggttcggccggatgcttacatattcgac
gatggagctcattatgaagttcgaacggtagctgaggaaagtgacgagcacctggaaagc
atgtcagcagctggcagcaggaaggagatacacatgatggaacaaatagaacgtcagaga
agtagtgattcgaaaacatctgttgatagtgatcggggcgacacggaggaggatgagtat
aaagtatcccaggagacgctgaccttggaatcgctgaaatttaggtacgcccagagaaga
cgcgattctttcggcgggaggagaaactccgaaggtggttatggagaagaagcatttagc
ggaagcagacctagtttaacgcgacgacaactatccgaaacgcaatccgaaccggatagt
tcggagccgatggtgatggggggcggcagcaacagcctgcagctccgtgccatcgtgcag
gaacggaacgttgcattcgcagaaccaaagatcaatgtgataccaccttcatcatcgagc
agcggctgcatgtgcggcattggcacaagctcggccggcccggcggtagtcgccgcctcc
gtcagctccgccgcccccgcaggtaattcagcaggtggtggtgttagtaatgggaacgcg
cagccacataacccccgctcgatgctcatgtccatgcacacagagtatacgagcatcacc
gacgagctggaatccgtttgcggactcctcagtccgccccgtacgccccgactcctttcg
cccccgagacccggacaatcggcccccgtacataatcgtcatcgccgtagatgcgcatcc
gaaatgtcgaatccggagttcgctttattcatggagaaacagcatcttcgcagtgccgag
gaatacgattacatgttgatggaggatctgatccaaaggaagtacgacgaggatgaggat
gaaccggtcgagcagaatcctgctctactaactgtggtgcaggaaagcagggaattcagg
aactcctatcctgggcgatctctgcgaagagcaagtgcaatcgaggatgacacaatgctg
ccgatagtctgcgtgaatcccagacaggaatcggaggaaagttctgaaaacatgccactg
gttcaacctcttcctcctagaccgacgatcgtcgtcgactcctcacagcttcccatacac
gaggaagtcgtcaagaaggctgacagcaaggcgagcttgcacatgcaatcggaaacgatg
tgttga
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integrated database retrieval system
