Nicrophorus vespilloides (burying beetle): 108560715
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Entry
108560715 CDS
T04922
Name
(RefSeq) 2',5'-phosphodiesterase 12-like
KO
K19612
2',5'-phosphodiesterase [EC:
3.1.13.4
3.1.4.-]
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvl03019
]
108560715
03029 Mitochondrial biogenesis [BR:
nvl03029
]
108560715
Enzymes [BR:
nvl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
108560715
Messenger RNA biogenesis [BR:
nvl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108560715
Mitochondrial biogenesis [BR:
nvl03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
108560715
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
IG_AIR9
PDE12-like_N
Motif
Other DBs
NCBI-GeneID:
108560715
NCBI-ProteinID:
XP_017773871
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MDSGELKANLRFLPWQNQCTFMFPIYYKNNVFELDDQINISVLSYETINEFMGYISDKIN
KLIHTNMGKENGNHVVDLKVLFKNRSKLVSTCNTVKHLESLKHLTFSILGIDFPVLINAP
LIQGMKLPEIIFHGHSVSAINFKFTFVDNDLSSFTWYKSKDKIEWEQVGRQFNYLVKKTD
ADHYLKLECLPINSQHTGEVFSVISQNVVCAIPQLPVCPFEDRQKHITGYTQNPNFRVVC
YNTLSCRYTGTQFTYCDKQHLSVDYRKQLIMKELTGYKADIICLQEVDNKVFSFYFRDEF
KKLNYAAIYNKKGNVIPEGLATIFNTKRFSFFGQGHIVFNMEVKKNPCLRNVLRIIKKDQ
DLEETFMKQATSLQFCKLKNQCLNEITIVANTHLYYHPDASNVRLIQTVLCLDYLKNICS
KEIKHNPNYNVGLIFCGDFNSTPDSEVYKFLVNGTIQYENAGYATTLFHPFSFKSACGTP
QYTNYTKEFKACLDYIFVETKMSVVDYVPFPSEDILKKDEGLPSAVFPSDHLPLIADVKY
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggacagtggagaattgaaagcaaatttaaggttcctaccatggcagaaccaatgcaca
tttatgttccctatatactacaaaaacaatgtgtttgaactcgatgatcagatcaatatt
tctgtgctgagctatgagactataaatgaatttatgggatatatatcggataaaataaac
aaattaattcatactaatatgggaaaggagaatgggaaccatgtagtggatttaaaggta
ttattcaagaacagaagcaaattggtgtctacctgtaacactgtgaaacatttggaatcc
ttgaagcatttgaccttttcaattttgggcatagatttccctgtcttaatcaatgctccg
ttgatacagggcatgaaattaccagaaataatattccatggacacagtgtgtctgcaatc
aacttcaaattcacatttgttgataacgacttgtcttccttcacttggtacaagtcgaag
gataaaattgaatgggaacaagttggtagacagttcaattacttagtgaaaaaaacagat
gctgatcactacttgaaattggaatgtttgccaataaattcacaacatactggtgaagta
ttcagtgtgatctctcaaaatgttgtctgtgcaataccacagttgccagtttgccctttc
gaagatcgacagaaacacataacaggctacacacagaaccccaatttcagggttgtgtgt
tacaacacactttcatgcagatacacaggtacccaatttacgtactgtgataaacagcat
ttatctgtggattacagaaagcagctgattatgaaggagctaactggttacaaagctgat
ataatctgcttgcaggaagttgacaacaaggtattcagtttttattttcgcgacgaattt
aagaagcttaactacgcagctatatataacaaaaagggaaatgtaattccggagggtttg
gccaccatcttcaacacgaaacgcttcagtttcttcggtcaaggtcatattgtgtttaac
atggaagttaagaagaatccctgcttgaggaatgtgttgagaataatcaagaaggatcaa
gatttggaggagacgtttatgaagcaagctacttcattgcagttctgtaagctgaagaac
cagtgccttaatgaaatcaccattgttgcaaatacgcatctgtattatcatcctgatgca
tctaacgtccgtttgatacagacggtactatgcttggattacttgaagaacatttgtagc
aaggaaattaaacataatccaaattacaatgtcggcttgatcttttgcggtgacttcaac
agtaccccagactcggaagtgtacaaatttttggtgaatgggaccatccaatacgagaac
gctggttacgcaacgacccttttccatccgttcagttttaagagcgcttgcggtacaccc
cagtatacgaactatacgaaagaatttaaagcatgcttggattatatattcgtcgagacc
aaaatgtctgtggttgactatgtgccttttcccagtgaggatattttaaagaaagatgaa
gggcttccaagtgcggtctttccatcggatcatctaccgttgatcgccgacgtaaaatat
tag
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