Nicrophorus vespilloides (burying beetle): 108560924
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Entry
108560924 CDS
T04922
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108560924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvl03019
]
108560924
Messenger RNA biogenesis [BR:
nvl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
108560924
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
108560924
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
EXOSC1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
108560924
NCBI-ProteinID:
XP_017774134
LinkDB
All DBs
Position
Unknown
AA seq
296 aa
AA seq
DB search
MSNKIHIGIASDRVNPSVALNQRVPKIYTPGEVITEQNELMRGHGTYEEDGCLKSSVAGL
KEEVNKLISIKPLKSRYNGEIGDVVVGRITEVQQRRWKVETNSRLDSVLLLSSVNLPGGE
LRRRSAEDEHMMRKYLQEGDLISAEVQNVFTDGSLSLHTRSLKYGKLSQGVLIKVFPALI
KRSKTRFHNLSVGASVILGNNGFIWICPTVNTEEESVGGFIQNLEYIVPIEEREIIARIR
NCILALAQSKMMLFDTSILFAFEESKKYAVAELLLPEAMVDVALLTQQRLTLLENQ
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacaaaattcatattggcattgcctcagatcgtgttaatccttcagtggcttta
aatcagagagttcccaagatttacacacctggtgaagttataactgaacagaatgagttg
atgcgaggacatggaacatatgaagaagatggttgtttaaagtcttccgtagctggattg
aaggaagaagtaaacaagttgatttccataaaaccattaaagagtagatacaatggtgag
attggtgatgttgttgttggaagaataacagaggttcaacaaagacgttggaaagtagaa
accaattcaaggttggactcagtattactcttatcatcagttaatttgcctggtggtgaa
ttgaggagaaggtcagctgaggatgaacatatgatgcggaagtacttacaagaaggtgat
ttgattagtgctgaagtacaaaatgtgtttactgatggctccctatcacttcatacaaga
agtttaaaatatggaaagttatctcaaggagttttaattaaagtgtttccggctctgatt
aaacgcagcaaaacccgttttcataatctttcagttggggctagcgtcattttgggtaac
aacggttttatatggatttgtccaacagtaaatactgaggaagaaagtgtcggtgggttt
attcaaaatcttgagtatatcgttccgatagaggaaagggaaattatagctaggatcaga
aattgcatattggctttggctcaaagtaaaatgatgctattcgatacaagcatcttattt
gcatttgaagaatccaagaaatatgccgttgctgaattgctgttaccggaagctatggtg
gacgtagctctgctcacgcagcaacgtttgactttgttagagaatcaatga
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