Nicrophorus vespilloides (burying beetle): 108561836
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Entry
108561836 CDS
T04922
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108561836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvl03019
]
108561836
Enzymes [BR:
nvl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
108561836
Messenger RNA biogenesis [BR:
nvl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
108561836
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
TniB
nSTAND3
AAA_10
CbiA
AAA_24
AAA_22
AAA_21
Motif
Other DBs
NCBI-GeneID:
108561836
NCBI-ProteinID:
XP_017775410
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MSGDDKKNIISEFKLDPEAELRFEIETKNEKVLLTLKSGSAEVFGTELVKGKTYEFTSGA
KIAVFTWQGCIVELKGKTDVSYVAKETPMVLYMNCHAGLDQMRLNAEKNNTKGPMCMVVG
PNDVGKSTVCRILLNYAVRMGRRPLYVDVDLGQGQISVPGTIGSILVERPALIDEGFPQE
APLVYHDGHKSPGDNPALYKKLLTQLGSTIKDRLEINKKTKMSGCIINTCGWIKGVGYKF
ILHTMEAFNVNVILVLDQERLYNELVRDSPRFVKVVFLPKSGGVVERSKGARGEYRDQRI
REYFYGTPKNALYPHSFEVKFSDVKIFKIGAPALPDSCLPLGMKARDHLTKLVLITPNPG
LLHHLLSVSFSEKDDDDMILSHCAGFICVTNVDVERQQLTVLSPQPKPLPNNLLLLSELQ
FMDSH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcgacgacaagaagaatatcatttccgagtttaagttggatccggaggccgaa
ttgcgattcgagatcgaaacgaagaatgaaaaagttttattaaccttaaaatcaggttca
gctgaagtttttggtactgaattggtaaagggaaagacttacgagttcacgtccggtgcg
aaaatagccgtgttcacttggcaaggttgtatagttgagttgaagggaaaaactgatgtg
agttatgtggcaaaagagacgccgatggtgttgtacatgaactgccatgcaggtttggat
cagatgagactgaatgcggagaagaacaacaccaaaggaccaatgtgtatggttgttggt
cctaatgatgtgggcaaatcaacagtgtgcagaatcttattgaactatgcagtgaggatg
ggtagaagaccactttatgtggatgttgatttgggacagggacagatctctgttcctgga
acaattgggagcattttagtagagagaccagcgctaattgatgagggtttcccacaggaa
gcgcctttggtttatcatgatggacataaatcaccaggagataaccctgctctttataag
aaattactaacacaattaggaagtacaatcaaagatagattagaaattaataagaaaaca
aaaatgtctgggtgcattataaacacctgtggatggatcaaaggggttggatacaaattt
attttacacacgatggaagcgttcaatgtgaacgtgattttggtgttggatcaggagagg
ctatataatgaactagtcagagattcaccgaggttcgtcaaagttgtgtttcttcctaaa
agtggtggagttgtagagaggtctaaaggagctcggggtgaatacagggaccaaagaatt
cgcgagtacttttatggaacaccgaagaacgcgctatatccacattcattcgaagtgaag
ttttcggacgtgaaaatattcaaaatcggagctccagcattaccagattcctgtttacca
ttgggtatgaaagcacgcgatcaccttaccaagctcgtgctgataacaccaaatccagga
cttcttcaccatctgctctcagtcagcttttctgagaaagatgacgatgatatgatctta
tcgcattgtgcaggattcatatgtgtaacaaacgtagacgtcgagagacaacaactgaca
gtattatcgccgcaaccaaaacccctgcccaacaatttattactgctatctgaattgcag
tttatggacagccactga
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