Nicrophorus vespilloides (burying beetle): 108561911
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Entry
108561911 CDS
T04922
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl03030
DNA replication
nvl03410
Base excision repair
nvl03420
Nucleotide excision repair
nvl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108561911
03410 Base excision repair
108561911
03420 Nucleotide excision repair
108561911
03430 Mismatch repair
108561911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nvl03032
]
108561911
03400 DNA repair and recombination proteins [BR:
nvl03400
]
108561911
DNA replication proteins [BR:
nvl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108561911
DNA repair and recombination proteins [BR:
nvl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108561911
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
AAA_22
AAA_30
AAA_18
AAA_14
RuvB_N
Zeta_toxin
PTCB-BRCT
AAA_5
RCF1-5-like_lid
AAA_17
AAA_33
AAA_16
RNA_helicase
AAA_assoc_2
Viral_helicase1
AAA_28
Motif
Other DBs
NCBI-GeneID:
108561911
NCBI-ProteinID:
XP_017775919
LinkDB
All DBs
Position
Unknown
AA seq
1052 aa
AA seq
DB search
MSRNIKSYFNVVYTKKGDKKPSPVKSSKSPANKKLQVISSDEEIPKAQKKNEVKIKKKKT
KVIESDSSDEEVKSMKKKAKVKTEEKLIPVNVKKLFGGKVVQSEVKNKKKKQDEDFEKTL
QQLDDDFDIDESILDKSMNEAMFEESTPKKTLSKESKLKKEKSSKEDTTVVEVACKKVKH
EKDSLNKDKCDNGESSCEMVNTPKKEKMKVEKDTAKVDKTPVSRKRKAEEDLDESGLDPD
QERYEKKRYSAMLYKQYLNRSGPVLKGQKEMPKGKPDCLKNLCFLKTGVLESMEKDDMDI
LVKEHGGRTVSAVSKKVNYMVVGQDPGPSKLEKARSFGIKEITEDELLDMILVKSGMPPK
YVKHSEDDDDIVCSPIKESNERRKKNLKEIEKKIKVEPKSPKKEKENKQENVKSKSPKFK
EENGKVKNSKKETEEENGKVKAHILANEKTQCSGNKVKSIKNEKESKVAKSVENKVVAVK
REVVEVSDDNRSWTEKYKPKDIAGIIGQQGDNSNMKKLISWLTNWYKNHSGKNRPKLVKP
SPWAKNDDGAYFKCALLSGSPGVGKTTTATLVAKELGFDVVEFNASDTRSKRLLHEEVAQ
LLSTKSLATYFKDGSAPTKKHVLLMDEVDGMAGNEDRGGIQELIGLIKNTSVPIICMCND
RQHPKIRSLVNYCMDLRFANPRIEQIRGAMMSICFKEKVKISPDALMEVIKGAGMDIRQT
LNNLSMWTAANKNLTVDTAQKESNASKKDTVIGPWEVIRKVFSEEEHKKTSIADKSKLFF
YDYSIAPLFVQENYLQVVPHCNKKDLLERVASAADAISMGDIIDKKIRSTNNWSLLESQA
MYSSVLPGHYMSGHFGGQINFPGWLGKNSKRTKFQRLMTELQVHMRTTASASKTAVNLDY
IYYLRDSIVKPLQKEGSDGVAKSLEVMQAYNLLREDLDSILELSQWPKRKDPMASVESKV
KAAFTRAYNKEGAMLPYSINTGTFKKKTSKVESDVYGDVEGEESDDNEDDDDITKDAMIK
EKKKPATKTKKETGEGSKKGAGTSKGRAKKAK
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtaatatcaagtcttatttcaatgtggtctacaccaagaaaggggataagaaa
ccatcaccagtaaagagcagtaaatcaccagcaaataagaagttgcaggtgatttcaagt
gatgaagaaataccaaaggcacagaagaaaaatgaagtcaaaattaagaagaagaaaact
aaggtaattgaatcagattcttctgatgaagaggtcaagtctatgaagaagaaggcaaag
gtgaagactgaggagaaattaatacctgtcaatgtcaagaagttgttcggagggaaagta
gtgcagagtgaagtaaagaacaaaaagaaaaagcaggatgaagattttgagaagaccctg
cagcaattggatgatgattttgatatagatgaatccattttggataagagcatgaatgag
gctatgtttgaagagagcacacctaagaaaactttaagcaaagagagtaaattgaagaaa
gagaagtcatctaaggaagatacaactgttgtagaggttgcttgtaagaaagttaaacat
gaaaaagattcactaaataaagataaatgtgataatggggaaagcagttgtgaaatggtg
aatactcctaagaaggagaaaatgaaggttgagaaggatacagcaaaggtggataaaact
cctgttagtaggaagaggaaagctgaggaggacttggatgagtctggattggaccctgac
caggagagatatgaaaagaagagatacagtgctatgctttacaaacagtatttgaacaga
agtgggccagttcttaaaggacaaaaggagatgcctaagggaaaaccggattgtttgaag
aacttatgtttcttgaaaactggagtattagagtcaatggagaaggacgacatggatata
cttgttaaagagcacggcggtaggacagtcagtgccgtttcaaagaaagttaattatatg
gtggtcggtcaagaccccggtccatcgaagttggaaaaagcgcgtagctttggaattaag
gagatcactgaagatgaattgctggatatgattctggtaaaatccggaatgccgccaaaa
tacgtgaaacattccgaagatgatgatgatattgtatgttctccaatcaaagagtcaaat
gagaggcggaagaagaatctgaaagaaattgaaaagaaaatcaaggtcgaaccaaagagt
cccaagaaggagaaggagaacaaacaagaaaatgtaaaatcaaaaagtccaaagtttaaa
gaggaaaatggaaaagtgaagaattccaagaaagaaactgaagaggaaaacggaaaagtg
aaggctcatatactagcaaatgaaaaaacgcagtgttctggaaataaagttaaaagtata
aaaaatgagaaggaatcaaaagtagctaaaagtgtggagaataaggttgttgcagtcaag
agggaagtggtggaagtgtcagatgataataggtcttggactgagaagtataagcctaag
gatattgcaggtattatcggacagcagggagataacagcaacatgaaaaagttaatttca
tggttgacgaattggtacaaaaatcattccggaaagaacagaccgaagcttgtaaagccg
agtccgtgggcgaagaacgacgatggcgcgtacttcaaatgcgctctgctgagcggttcg
ccgggcgttggtaagacgaccacggccactctagttgccaaagagttgggcttcgacgtg
gtagagttcaatgcttcagataccaggagtaagagattgctgcacgaagaagtagcccag
ctgctgagcaccaagtctctggccacttacttcaaggatggatctgcgccgaccaagaag
cacgtccttctgatggacgaagtagatggaatggccggaaatgaggatagaggtggaatc
caagagctcatcggtctcataaagaatacaagtgtgccaataatatgcatgtgcaacgat
cgtcagcatccgaagatacgttctttggtaaactattgtatggatttgcgattcgcgaat
cctcgcattgaacaaatccgaggcgccatgatgagtatttgcttcaaagagaaggtaaag
atcagcccggacgctttgatggaggttatcaaaggcgccggcatggatataagacaaacg
ctgaacaacttgtcgatgtggacggccgcaaacaagaacttgacggtggacactgcgcag
aaggagtcgaatgcttcgaagaaagacactgtgatcgggccttgggaggttatccggaag
gtgttttctgaagaggagcataagaagacttcgatcgcggacaagtcgaagctgttcttt
tacgattacagtatcgcgccgctcttcgtgcaagagaactatctgcaggtggtgccacac
tgcaacaagaaggatctcctagagagggtagcctccgccgcagacgccatcagcatgggt
gatatcattgacaagaaaatcagatctacgaacaattggtctctgttagagtcgcaggct
atgtactcgtcggtgttgccaggtcactacatgtccggtcactttggcggtcagatcaac
ttccccggatggttgggcaaaaactctaaaagaaccaaattccaaagactcatgactgag
cttcaagtccacatgcgcacgacagcttccgcaagtaaaactgctgttaatctggattac
atctactatttacgagattcgatcgtgaaacctctacagaaggagggatcagatggcgtg
gcaaaatcgctggaggtgatgcaagcttacaacttgctcagggaagacctggatagcatt
ttggagttgagccagtggcccaagcgaaaagacccaatggcttcggtggagtccaaggtt
aaagctgcattcacccgcgcctacaacaaggaaggcgcgatgctgccatattctatcaac
acggggaccttcaagaagaagacatcgaaggtcgaatcggacgtttacggagacgtcgaa
ggcgaggaatccgatgacaacgaagacgatgatgacattactaaggatgctatgataaag
gagaagaaaaagcctgcgaccaaaaccaaaaaggaaactggtgagggaagcaagaagggt
gcgggtacctcgaaaggaagggcgaagaaggcaaaataa
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