Nicrophorus vespilloides (burying beetle): 108562968
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Entry
108562968 CDS
T04922
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1-like isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvl03041
]
108562968
Enzymes [BR:
nvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108562968
Spliceosome [BR:
nvl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108562968
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
HA2_C
OB_NTP_bind
HA2_N
AAA_19
ResIII
nSTAND3
Ank_2
AAA_22
Cas3-like_C_2
ATPase
Flavi_DEAD
PhoH
NPHP3_N
T2SSE
nSTAND_NTPase7
AAA_30
Motif
Other DBs
NCBI-GeneID:
108562968
NCBI-ProteinID:
XP_017776971
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
MISLYSTSGYSAENWETEDDLSHRIERIELDDEFRTYVDDFLKSFVENPSLGSQVLSGLS
DVEQNYFMSKTIPLNLYTKVNSFSPGFQTLCISKSRFKSMDQRVHPHSMCNKNKEILNNY
VKCEISMAANSIEDNRVHDSLGKLCLEPMKNVSKTQSPMWKERESLPIFNSKQKILKAIA
KNSVVIVSAETGSGKTTQVSQYILEEAAEKRKPVKIVCTQPRRISTISVANRVAAERGEE
IGNTVGYQIKLESRISAQTSLIYCTSGILLKTLMFGEEQFKNMSHIIVDEIHERDKNNDF
LLICLRRALEKFPHLKIILMSATMDMDLYVNYFKKVEIVSVAGRSYPITSLFLDDILPMT
RYTDLTIMNHLEKNDFVEYDWVPREQTSREFVDPDLDEEVVQTLSVCCNEGNPQSFDHMM
QLIKCENIPVDYVGFHASLPTILTAACYHGRLDLVQTLLPLGASTHSTYYAKSVIEVARE
NGHIDVANYIEDYKRRFLERVPADEFFNLYEKLTFCQDYELDNELILSVINYIHTNYDRS
GAILVFLPGYDDIMHCLNKLKTNKNYALFPLHSNIQMSEQKKIFRRVPQNQQKVILSTNI
AETSITIDDVRYVVDCGKAKVKDFDLATQASCLQTQWISKASMKQRAGRAGRTQDGLCFH
IYSKRCYESLEDNTIPEILRTPLQELCLQAKVLTSKEESVTCFLQEAIEPPSTDSINSAI
MSLKFLGAMDAHENLTDLGKHLAKISLPAHLGKMLVYSCIFKCLEPILILVSVLVQKDPF
VLGANNRTQRFNFGNNSSSDHFILIRLFQKWDEARSVGKHFAFCYENFISPSSMDTAKQT
AKQLLNQLKSLGFVPPTAFSNNNELNFNSNCWPMVKGCIATGLYPKLAYYDDDRLKINAG
ERVKVHSSSINKGKDSANREKQRELWIGYEELTKNFRNNYGKNMIKCTTVFNALTVALLC
GVDADFSDGVDEVCLDDKHVFIFMHVDLQKFRTNVDELIKKKICFPRTSFNNEEFNIVRN
LGILLTNEDIECEVPMVKMGIQKQNKFPGNNFNSSPRNHQYRPRHGKK
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgatttctttatacagcacgtcgggttattcagcggagaattgggaaacagaggatgat
ctgagccacagaattgagcgtattgaattagatgatgaattcagaacatatgtggatgat
ttcttgaaatcatttgtcgaaaatccctcattgggctcccaagtacttagtggattgtct
gatgtcgagcagaactattttatgtccaagacaattcccttaaacctctacacaaaagta
aactcattcagtcccggattccaaacattatgtatcagcaaatcgaggttcaaaagtatg
gatcaaagagtccatccacatagtatgtgcaacaagaacaaggaaattttaaacaattat
gtaaagtgtgagatatctatggcagcaaacagtattgaagacaatagagttcatgactca
ctagggaagttgtgcttggaacccatgaaaaatgtatcgaaaactcaaagccccatgtgg
aaagaaagagaatcacttccaatcttcaacagtaaacagaaaattttaaaagcgatagct
aaaaactcagtggtcatagtgtcagcagagacaggctctggaaagaccacacaagtatcc
cagtatatattggaggaggctgcagagaagagaaaacctgtgaagattgtctgcactcaa
ccaaggagaatatccacaatatcagtggcaaacagagtggctgcagaaaggggagaagaa
ataggaaatacggttgggtatcagataaagttagaatcgcgcatttcagcgcaaacatca
ttgatatattgcactagcggtatcttgttaaaaactcttatgtttggtgaagaacagttt
aaaaacatgtcgcatattattgtggacgaaattcacgagagggataagaataatgatttc
cttttgatctgcttgaggagggctttggagaagtttccacatttgaaaattattctgatg
tcagccacaatggatatggatttatacgtgaattattttaaaaaagtcgaaatagttagc
gttgccggaagatcctaccctattacttcattgtttcttgatgatatattgccgatgact
agatacacggatttaactattatgaatcatttagaaaagaatgattttgtagagtatgat
tgggtaccaagagaacaaacatccagagaatttgtagatcccgatttggacgaggaagtc
gtccaaactttgagcgtgtgctgtaatgaagggaatccgcaaagcttcgatcatatgatg
cagttgatcaaatgtgaaaacatccccgttgactatgtaggcttccacgctagtcttcct
acaatattaacagcggcgtgttatcatggaagacttgacttagttcagactcttttacct
ttaggtgcatcaacacattctacatattatgctaaatctgtgatagaggtagctcgggaa
aatggacatatagatgttgctaattacatagaggactataaaaggaggttcctggaaagg
gttcccgcagatgagttcttcaacttatacgaaaaactaacgttctgccaggattacgaa
ctggataacgaacttattttgtctgtaatcaattatatccacaccaattacgataggagc
ggagctattctggtgtttctaccaggatacgatgatataatgcattgtttaaacaagttg
aaaaccaacaagaactacgctcttttcccgctacacagtaacatccagatgagtgaacag
aagaagatatttaggcgtgttcctcagaatcagcagaaggtcatactgtccacaaatatt
gctgaaaccagcataaccatcgacgatgttagatatgttgtggattgcggcaaagccaaa
gttaaagatttcgatttggcgacacaagcatcgtgtttgcaaacacaatggatttccaaa
gccagtatgaagcagagggcaggccgagccggtcgtactcaggatggcctatgttttcat
atatattccaagagatgttacgagtctctggaagataatacgataccggagattttaaga
actcctttgcaggaattgtgtcttcaggctaaagtgctaacttctaaagaagaatcagtc
acttgctttttgcaggaagctatagaaccaccatcaacagattcaattaatagtgctatt
atgtctttgaaattcctgggagccatggacgctcatgaaaatttaactgatttaggaaaa
catttggccaagatttcattgcctgcgcatttaggaaaaatgcttgtttattcttgcatt
ttcaaatgtctagaaccgattcttatcctggtatcagttttagttcaaaaggatccgttt
gttttgggagcaaataacagaacgcagcgtttcaacttcggaaataattcatccagtgat
catttcatattgataagactattccagaaatgggatgaagctcgatccgtgggcaagcat
tttgctttctgctatgaaaattttatcagtccgtcgtccatggacacagcgaagcaaact
gctaagcaactgttgaatcaattgaaatcgctaggtttcgtaccacccactgcattttct
aataataacgagttgaatttcaactctaactgttggcctatggtgaaaggttgcattgcc
acaggtttatacccaaaactcgcgtactacgatgatgatagactgaagattaacgccggt
gaacgtgtgaaagttcacagctcatccatcaacaaaggaaaggattctgctaatagagag
aagcaacgtgaactctggatcggttacgaagagttgaccaaaaattttaggaacaactac
ggcaagaacatgattaaatgcacgactgtcttcaatgcattgacggttgcactattgtgt
ggagttgatgctgatttttcggatggagtagacgaagtgtgcctcgatgataaacacgta
ttcatatttatgcatgtcgatttacaaaagttccgtacgaacgtcgacgagctgatcaag
aagaaaatttgtttcccgaggacgtctttcaataacgaggaattcaacatcgtaaggaac
ttgggtatattgttgaccaatgaggacattgaatgcgaagtgccgatggtgaaaatggga
atccagaagcaaaacaaattcccgggaaataacttcaacagtagtccgagaaatcaccag
tacagaccacgtcacggaaagaagtag
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integrated database retrieval system
